Heatmap: Cluster_50 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule
Ovary
Egg cell
Pollen tricellular
Pollen
Sperm
Flower (buds)
Flower
Panicle
Milk grains
Seeds
Seedling
Seedling (12-day-old, DongJin)
Seedling (12-day-old, DongJin, mutant)
Seedling (22-days-old, 22C)
Seedling (22-days-old, 30C)
Meristem
Stems
Callus
Leaf
Leaf (Azucena)
Leaf (Kinandang puti)
Leaf (Pandan wangi)
Leaf (Tadukan)
Leaf (chilling-treatment, 4C, 33h)
Leaf (drought-stress, 1 day)
Leaf (drought-stress, 3 days)
Leaf (drought-stress, 15 min)
Leaf (drought-stress, 45 min)
Leaf (drought-stress, 90 min)
Leaf (drought-stress, 90 min, recovery 15 min)
Leaf (drought-stress, 90 min, recovery 90 min)
Leaf (drought-stress, 90 min, recovery 210 min)
Leaf (heat-stress, 15 min)
Leaf (heat-stress, 150 min)
Leaf (heat-stress, 210 min)
Leaf (heat-stress, 120 min, recovery 15 min)
Leaf (heat-stress, 120 min, recovery 60 min)
Leaf (heat-stress, 120 min, recovery 120 min)
Leaf (dry season, irrigated field)
Leaf (dry season, rainfed field)
Leaf (wet season, irrigated field)
Leaf (wet season, rainfed field)
Root
Root (heading stage)
Root (tillering stage)
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
-1.84 -1.48 -2.28 -1.73 0.5 5.33 -0.46 -0.24 0.33 -0.87 -1.5 -4.84 -1.69 -2.21 - - -5.63 -4.24 - -2.5 -7.18 -6.46 -3.08 - -3.29 - - - - - -3.45 -6.8 - - - -4.92 - - - -6.98 -5.85 -5.06 -4.2 -1.21 -0.85 -3.55 - - -
-1.2 2.08 -0.35 -3.25 -1.39 4.82 -4.09 - 1.11 - -2.41 -3.02 - - - - - -3.04 - -0.43 - - -4.41 - 3.34 - - - - - - - - - - - - - - -2.8 - - - -2.23 -0.49 -1.94 - - -
-1.51 -0.06 0.94 -1.94 1.54 5.0 -1.37 -1.36 -0.31 - -2.74 1.53 - - - - -1.43 -3.22 - -5.37 - - - -4.43 - - - - - - - - - - - - - - - - -4.35 - - -4.12 -1.83 - 1.85 -0.26 -0.6
-2.58 1.7 - 0.77 0.37 4.67 -0.15 -0.1 1.65 - -2.98 - - - - - 0.88 -0.59 - -1.14 - -2.64 -4.73 -2.76 0.66 - - - - - -0.55 - - - - - - - - -2.47 -4.28 -3.38 -3.27 -0.37 1.05 -0.51 1.05 -1.26 -
-3.09 -1.94 -5.81 1.75 3.49 4.98 -0.35 -0.82 - -4.38 -3.47 - -3.55 -3.25 - - -4.38 -5.14 - -2.62 -8.15 - -9.05 - - -2.59 -4.99 - - - - - - - - - - - - - - - - -2.25 - - - - -
0.93 2.72 -1.92 - -0.13 4.48 1.07 1.98 -1.12 -1.67 -1.74 - 0.83 -0.22 - - -0.05 -4.82 - -2.79 - - - - - - - - - - - - - - - - - - - - -2.13 - - 1.74 - - 1.32 - -
-0.02 0.58 - - -2.25 4.65 -1.52 -2.26 3.12 -1.16 -1.55 - - - - - -0.45 - 2.22 -2.33 -3.95 - - -3.86 - - - - - - - - - - - - - - - -3.18 -4.47 - - -0.27 1.57 -0.43 - - -0.45
-2.65 -1.37 -3.43 -3.16 -2.07 5.54 - -7.71 -2.18 -1.96 -0.75 - - - - - -7.3 -5.61 - - - - -7.13 - -2.21 - - - - - - - - - - - - - - -7.91 - - - -4.59 - - -4.78 - -
-1.91 -0.35 -3.89 -2.63 -4.29 5.55 -3.23 -3.89 -2.99 - -5.05 -4.9 -4.47 - - - -7.12 -6.93 - -7.81 - - -7.77 - - -4.4 -4.47 - - -4.33 - - - - - - - - - - -6.42 - - - -4.56 -3.99 - - -
1.31 2.57 - -2.1 - 4.21 -1.03 -3.9 2.51 -4.14 -2.52 - -1.53 1.75 - - -1.49 -4.83 - -7.63 - - -4.43 - 3.41 - - - - - - -2.6 - - - - - - - -4.37 - - - -1.5 - - - - -
1.21 0.26 0.54 -4.66 -1.12 4.14 0.8 0.48 0.1 -1.51 -0.82 0.08 -0.96 -0.72 -1.32 -1.94 0.48 -2.24 0.97 0.55 -3.08 -1.77 -2.78 -2.55 1.65 -1.28 0.11 -2.99 -2.84 -3.8 -3.57 -2.67 -4.57 -5.86 -3.16 -3.46 -3.11 -3.62 -2.95 -4.17 -3.93 -4.21 -4.78 -0.06 -0.95 -0.44 -0.6 -0.26 1.31
-1.48 1.43 -1.97 -1.04 -1.77 5.08 - - -0.42 - -3.94 -1.61 -2.06 2.03 - - -3.42 -1.22 - - - - - -3.38 -25.56 - - - - - - - - - - - - - - - -4.09 - -2.94 -2.26 - 0.18 0.38 - 1.04
-1.28 1.45 0.29 1.82 -0.32 4.76 1.92 0.57 0.42 - -1.5 - -0.45 0.22 - - -0.44 -1.69 - -1.29 -2.94 - - - - - - 0.4 - - - - - - - - - - - -2.98 - - -1.24 -0.21 - - - - -
-2.81 -2.94 -3.58 2.28 -0.39 4.63 0.66 1.05 -2.49 -3.16 -1.0 -1.19 -1.17 -1.34 0.61 0.72 -3.78 -2.01 1.42 -0.19 -3.82 -3.79 -3.37 -3.69 0.58 -0.45 0.0 -4.03 -5.2 -4.63 -4.4 -3.26 -3.35 -4.15 -4.77 -5.02 -5.2 -4.28 -4.39 -3.56 -2.77 -2.98 -2.59 -1.02 -2.73 -3.66 -6.79 - -4.97
2.23 2.16 - - -1.27 4.9 - - - -2.29 -2.77 - -0.69 1.44 - - - -1.32 - - - - -2.84 -2.45 - - - - - - - - 0.21 - 0.5 - - - - -2.79 -1.26 -2.2 -2.67 - - - 0.7 - -
1.04 2.2 -2.91 0.09 -0.78 4.89 -2.44 -1.7 2.33 -3.26 -2.72 -2.25 -1.65 0.07 - - -4.28 -4.47 - -1.31 - - - - - -1.21 0.61 - - - - - - - - - - - - - - - - -1.91 - - - -0.19 -
1.24 2.88 0.69 - - 4.74 - - 3.06 - -1.91 - - - - - - -4.43 - - - - - - - - - - - - - - - - - - - - - -3.42 - - - - - - 1.19 - -
-5.02 -1.21 - -0.88 -0.31 5.56 -4.42 -4.42 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-0.98 2.7 - -0.26 - 5.3 - -1.26 - -0.5 -0.72 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-1.14 1.98 - 0.98 - 5.36 -2.46 -2.13 0.16 - -6.08 - - - - - - - - - - - - -3.47 - - - - - - - - - - - - - - - - - - - - - - - - -
-4.57 -2.61 -3.85 1.07 2.91 5.17 -0.34 -3.94 -2.92 -6.04 -0.06 -3.83 - -5.39 - - -8.81 -7.51 - -5.68 -8.71 -5.89 - - - -23.92 - - - - -6.65 -5.9 - - -6.05 -6.4 - -4.86 - - - -33.28 -8.9 -2.96 -2.61 -4.21 -2.13 -2.27 -
-3.25 2.64 - - - 5.31 - - - - -3.31 - - - - - -1.45 -3.3 - - - - - - - 0.25 0.18 - - - - - - - - - - - - - - - - - - - - - -
-0.84 0.75 -1.51 -1.27 0.55 5.07 -2.29 -5.28 -2.97 -5.52 -1.37 0.86 -3.07 - 0.1 0.11 -4.51 -2.34 - -3.01 -2.49 - -3.67 -3.71 -0.88 -2.16 - - -1.12 -2.08 - -1.4 - - -1.73 -0.05 - -2.3 -1.54 -4.05 -2.95 - -2.12 -1.96 -0.32 -1.7 - - -
-0.37 2.91 - -0.96 -0.61 4.82 -3.14 -3.14 1.43 - -5.21 - - - - - -3.28 - - - - -3.52 - -1.56 - 2.79 - - - - - -0.25 - - - - - - - - - - - -3.01 - - - - -
1.29 1.82 -2.35 1.68 0.39 5.0 -1.6 -0.31 -0.25 - 0.79 - - - - - -3.79 -3.42 - -0.8 - - -3.23 -4.59 0.29 - - - - - - - - - - - - - - - - - - - - - - -1.04 -
-0.32 2.83 0.68 -0.63 -2.73 4.17 1.54 0.54 -2.43 -2.53 -0.88 -3.57 1.99 2.4 - - -0.72 1.13 - -0.59 -3.98 -5.91 - -5.49 -0.82 - - - - - - -3.92 - - - - - - - -4.4 - - -4.53 0.36 -2.31 -1.84 - - -
1.48 0.42 -0.55 - - 4.53 -4.61 -1.93 4.01 -2.12 -2.28 - - 0.62 - - -0.29 -3.07 - -5.27 -4.45 - - -4.61 - -1.49 - - - - - - - - - - - - - -1.74 -3.98 - -4.06 -3.2 - - - - -0.47
-1.2 1.15 - -2.07 - 5.5 - - -0.67 - - - - - - - -2.79 - - -3.7 - - -4.47 - - - - - - - - - - - - - - - - - - - - - - - - - -
0.29 0.67 1.03 - -1.69 4.94 -1.57 -1.73 1.03 -5.95 -3.63 1.56 -1.34 -0.86 - - 1.47 -1.5 - -9.49 -6.24 -5.18 -4.3 - - - -2.65 - - - - -2.41 - - - - - - - - - -4.71 -4.91 -4.56 -1.72 -0.11 -1.31 - 0.2
-0.56 -0.27 1.79 1.65 0.53 4.95 0.96 0.95 -0.42 -2.48 -0.82 -4.38 -2.69 -2.39 - - 1.17 -4.73 - - -8.08 - - -6.04 - - - - -3.24 - - -4.15 - - - - - - - - - - - - - - -2.1 -2.82 -
1.7 1.98 - -0.81 - 5.27 - - - - - - - - - - -1.88 - - 0.05 - - - -1.11 - - - - - - - - - - - - - - - -1.56 -1.82 - - -2.76 - - - - -
1.92 0.05 -2.57 0.49 1.87 4.99 -0.54 0.79 -2.35 -2.58 -0.8 - - - - - - -5.2 - -1.21 - - -4.08 -2.77 - - - - - - - - - - - - - - - -4.24 - -2.76 -3.12 -0.22 - - -0.13 - 0.07
-0.34 0.02 - 0.49 -1.96 4.39 -4.28 - 2.47 - -1.36 - - - - - -3.47 -1.73 3.6 -0.64 -4.55 -1.27 -3.71 -0.96 - 0.06 -1.22 - - -1.07 -1.98 - - - - - - - - -3.42 -2.59 -2.94 -2.29 -3.1 -1.51 0.16 - - -
-3.16 2.6 - - -0.94 4.8 - - - - -6.78 - - 3.77 - - -0.78 - - - - - - - - - - - - - - - - - - - - - - - - - - -2.23 - - - - -
-1.21 1.56 -1.67 0.45 0.01 5.24 -2.72 -2.71 1.1 -3.96 -3.52 - - -1.66 - - -2.79 -4.38 - -3.7 - - - - 0.75 - - - - - - - - - - - - - - - - - - -4.79 -2.7 - - - -2.48
-3.22 1.24 - 0.01 -0.9 4.23 1.65 1.93 -0.43 -6.46 -2.15 -3.07 0.15 0.94 - -0.91 -1.74 0.62 - -1.19 -4.03 -5.51 -1.94 -3.58 -1.87 - - - - - - -3.39 - - - - -2.94 - - - - - - 1.02 -0.49 -1.17 1.49 2.15 -0.06
- 0.8 - -1.56 - 5.39 - - - -0.43 -1.4 - -0.03 - - - - -2.73 - - - - - -3.22 - - - - - - - - - - - - - - - - - - - - 1.36 - - - -
-4.82 0.46 - -3.36 - 4.05 -6.86 - -5.38 -0.1 0.61 -2.03 -3.49 0.79 - - -4.67 -3.42 2.81 -4.99 - -7.06 -8.08 - - 0.63 -0.82 - - - - - - - - - - - - - - - - -3.96 -2.07 -0.36 -2.04 -1.38 3.94
- 0.91 1.0 -2.86 1.19 5.41 -2.94 -3.93 - - - - - - - - - - - - -4.53 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-3.75 2.66 -1.08 - 0.49 5.27 -4.86 - -1.39 - -3.04 - - -0.37 - - -5.12 -4.93 - -6.41 -4.37 -5.4 - -3.87 - - - - - - - -1.09 - - - - - - - - -5.56 -3.9 - -5.93 - - - - -
- -3.1 -1.06 -2.45 1.46 5.23 -1.79 0.05 - -1.96 -2.45 -0.91 - - - - - - - -0.96 -5.97 - - -5.49 - 1.67 0.15 - - - - -1.86 - - - - - - - - - -2.37 -4.1 -2.24 - - - - -
0.42 0.84 -2.99 - -3.6 5.44 -4.91 -3.9 0.3 -2.88 -3.01 - - -3.7 - - -2.0 - - -5.58 -5.41 -6.34 - -4.91 - -1.78 - - - - - - - - - - - - - -4.59 - -5.32 - -5.98 - - - - -
-0.99 -0.1 -1.5 - 1.51 5.28 -0.52 -4.44 -2.5 -1.69 -2.3 -1.51 - - - - -3.35 -7.47 0.18 -6.98 -6.28 -5.27 -6.57 -4.07 -0.59 - - - - -2.58 - - - - - - - - - - -6.52 -5.6 - -6.73 -3.03 - -0.07 -2.46 -1.87
- 0.54 -0.35 -2.39 -0.96 5.5 - - - - - - - - - - - - - - - -2.82 - - - - - - - - - -0.96 - - - - - - - - - - - - - - - - -
-3.81 2.62 - -2.04 -3.88 5.27 - -4.48 -3.07 - -3.76 -2.89 - 0.45 - - -2.1 -3.68 - -2.3 -4.43 -5.34 -3.46 -4.48 - - - - - - - - - - - - - - - - - - - -2.48 - - - -1.75 -0.07
0.69 2.47 -2.45 -2.1 - 5.26 -1.38 -2.95 - - -4.35 - - -0.56 - - -1.59 -5.35 - - - - - - - - - - - - - - - - - - - - - - - - - - - -0.46 - -0.23 -
0.05 3.24 - 1.65 - 4.45 1.63 - - - -1.77 - - 1.69 - - - - - -5.51 - - - - 2.77 - - - - - - - - - - - - - - - - - - - - - - - -
0.76 0.73 0.1 -1.31 -0.81 4.4 -1.36 -0.9 -0.18 -2.3 -1.68 -0.1 -0.7 0.2 -1.89 -0.09 1.58 -2.22 -1.21 -0.4 -1.75 -3.3 -4.25 -3.89 -2.77 -0.37 0.53 -1.39 -2.08 -2.31 -2.62 -1.3 -2.01 -3.53 -1.55 -0.61 -1.66 -0.24 -1.15 -1.2 -1.02 -0.97 -0.58 -0.85 -2.63 -1.08 -2.58 -2.03 -0.06
-3.85 0.74 1.26 0.73 - 5.39 - - - - -1.47 - - - - - -3.34 -2.26 - -1.71 - - - - - - - - - - - - - - - - - - - - - - - -1.84 - - - - -
-1.66 1.44 1.4 - -0.99 5.07 - - - 0.38 -0.42 - - - - - - -2.37 - - - - - -4.1 - - - - - - - - - - - - - - - - - - - 0.76 - - 1.6 1.1 -
-2.27 1.47 -1.58 -0.35 -0.72 5.24 -0.92 -0.87 -2.46 -3.1 -0.78 -2.55 -1.86 -0.24 - - -5.12 -2.0 - -6.12 -5.54 -3.55 -4.52 -3.41 - -2.49 -2.48 -3.3 - - - -2.9 - - - - - - - -5.9 -5.57 -5.83 -5.02 -3.44 -3.61 - -3.42 -0.42 -0.17
-5.8 -0.22 -4.18 1.25 2.0 5.32 -1.16 -3.36 -4.42 - -4.44 - - - - - -1.86 -0.79 - - - - -6.22 - - - - - - - - -4.38 - - - -2.45 - - - - - - - - - - - - -
-2.41 0.44 - 1.09 -2.46 4.96 -1.24 -0.74 -4.62 -4.06 -1.75 - -2.46 -4.53 - - -6.13 -3.83 - -5.32 -7.41 - - - 3.57 - - - - - - - - - - - - - - -5.86 - - - -3.72 - -4.0 - - -3.11
-1.87 3.13 1.01 0.56 0.61 4.04 1.39 -0.57 -0.03 - -0.89 -3.01 -0.43 0.04 - 0.28 -0.0 0.16 1.99 -1.28 - -4.64 - - 0.42 -1.08 -0.02 - - - - - - - - - - - - - - - - -0.41 - - -0.97 - -
-3.1 1.58 - - -1.19 5.29 - -1.35 -0.96 -1.24 -3.02 - -2.28 - - -0.19 -1.19 -0.25 - -5.85 - -5.03 - - - 1.35 - - - - - - - - - - - - - - - - - - - - - - -
0.23 1.2 - 2.99 -0.8 4.72 1.23 1.21 1.41 -5.33 -2.79 - - -3.25 - 0.86 -5.31 -4.62 - -7.81 - -5.68 -5.63 -4.47 - - - - - - - - - - - - - - - - -5.7 - - -4.44 - - -0.02 - -
-0.53 1.71 -0.22 -3.29 -1.18 3.89 0.53 0.45 0.15 -0.92 -0.42 0.4 0.84 1.19 0.44 0.46 0.93 -0.31 1.41 0.25 -2.97 -3.25 -2.14 -2.41 0.52 0.54 -0.2 -0.8 -2.45 -1.37 -1.59 -2.55 - - - -3.05 -2.91 -3.26 - -3.26 -2.59 -1.72 -3.03 0.12 -1.75 -1.41 - - -3.42
-3.23 0.06 -2.5 -2.3 -0.48 4.54 -2.55 -2.54 -2.9 -6.9 -3.36 -0.97 0.51 -0.15 -0.71 -0.29 -5.76 0.05 - -0.9 -0.32 -0.89 -0.3 -0.33 1.26 -2.63 -2.6 -1.38 -0.3 0.15 0.34 0.23 0.01 -2.92 -1.61 -0.46 -0.34 0.42 -0.01 -2.24 -1.11 -2.38 -1.35 -3.28 - - - - -
- 0.6 - - 1.01 5.43 -1.48 - - - -4.14 - - - - - -1.75 - - 0.24 - - - - - - - - - - - - - - - - - - - - - - - -0.8 - - - - -
-1.97 0.44 1.07 -1.24 - 5.47 -4.19 - - -4.43 -3.54 - - - - - - - - - - - -4.42 - - - - - - - - -1.3 - - - - - - - - - - - - - - - - -
-4.38 0.39 - 0.61 -2.17 5.08 -3.25 -2.61 -2.1 -4.0 -3.25 -4.6 -4.36 -4.41 - - - -2.62 - -6.6 - - - - - - - - - - - -4.95 - - - - - - - - - - - -1.55 2.46 2.35 - - -
-5.77 1.58 -0.09 1.36 -3.14 5.32 -4.09 -0.41 -2.63 - -5.09 - - - - - - -5.26 - - - -4.73 - - - - - - - - - -2.79 - - - - - - - - - - - -2.78 -1.3 -0.5 - - -
0.32 2.31 -1.07 1.25 -0.56 4.39 0.22 -0.27 -3.75 -2.04 0.09 - 1.41 2.19 - - -0.83 0.39 - -0.53 - - - - - - - - - - - - - - - - - - - - -5.6 -4.57 - 1.79 - - 0.42 - -1.75
-0.05 1.89 - 1.19 -0.85 5.12 -0.87 -2.02 1.86 -3.28 -0.9 -3.88 - - - -1.14 -4.13 -6.96 - -3.01 - -4.04 - - - - - - - - - - - - - - - - - - - - - -2.13 -1.63 -1.8 - - -
-1.67 0.92 - 0.47 - 5.15 -2.41 0.18 - 0.47 -1.93 - - - - - - - - - - -1.6 -5.02 -4.65 - - - - -2.17 - - - -0.38 2.13 - - - - - -2.15 -6.54 -0.02 -5.31 - - - - - -
- -0.18 - 0.8 0.38 5.48 -4.25 -4.24 - - -5.66 - - - - - - - - -2.54 - -4.82 -4.13 - - - - - - - - - - - - - - - - -4.43 - - - -4.94 - - - - -
-1.09 -0.03 -1.54 - - 5.54 - - -1.62 - -7.6 - - -3.05 - - - - - - - - - -5.71 - - - - - - - -2.95 - - - - - - - - - - - - - - - - -
-0.72 -0.35 -2.94 -0.05 -0.92 4.8 -0.58 0.18 -0.34 -2.66 -3.05 - 1.59 0.61 - 0.47 -3.1 -2.78 - -0.38 -2.83 - -2.57 -4.22 - -0.01 -0.28 - - - - - 0.14 -1.17 - -3.27 - - 0.1 -2.92 -2.75 -2.07 -2.75 0.76 -1.1 -1.91 - - -2.08
- 0.06 -2.9 - - 5.56 -2.96 - - - -5.81 -2.35 - - - - - - - -4.9 - - - - - - - - - - - - - - - - - - - - - - - -2.2 - - - - -
1.6 1.71 -1.87 -2.05 -1.7 4.14 2.1 0.27 -1.0 -2.53 -1.65 - -1.31 -1.98 - - -2.62 -0.38 1.05 -1.02 - -5.29 - - 2.46 -0.01 -0.36 - - -1.55 - - - - - - - - - -5.34 - - - 1.79 -2.05 0.46 -0.26 - -
-1.23 1.74 -3.41 -1.66 -0.21 5.44 -5.12 -5.11 -2.83 - -5.01 - - - - - - -2.91 - -3.41 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-2.19 1.62 -1.3 2.31 1.18 4.64 0.45 0.42 2.08 -3.82 -2.52 -1.11 -4.0 - -0.93 - - -3.97 - -2.52 -4.13 -3.7 -3.48 -3.58 - -3.19 -2.25 - - -3.11 - -2.66 - - - - -1.39 - - -5.12 -6.84 -3.65 -5.77 -1.08 0.46 0.28 -2.56 - -3.49

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.