Heatmap: Cluster_223 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule
Ovary
Egg cell
Pollen tricellular
Pollen
Sperm
Flower (buds)
Flower
Panicle
Milk grains
Seeds
Seedling
Seedling (12-day-old, DongJin)
Seedling (12-day-old, DongJin, mutant)
Seedling (22-days-old, 22C)
Seedling (22-days-old, 30C)
Meristem
Stems
Callus
Leaf
Leaf (Azucena)
Leaf (Kinandang puti)
Leaf (Pandan wangi)
Leaf (Tadukan)
Leaf (chilling-treatment, 4C, 33h)
Leaf (drought-stress, 1 day)
Leaf (drought-stress, 3 days)
Leaf (drought-stress, 15 min)
Leaf (drought-stress, 45 min)
Leaf (drought-stress, 90 min)
Leaf (drought-stress, 90 min, recovery 15 min)
Leaf (drought-stress, 90 min, recovery 90 min)
Leaf (drought-stress, 90 min, recovery 210 min)
Leaf (heat-stress, 15 min)
Leaf (heat-stress, 150 min)
Leaf (heat-stress, 210 min)
Leaf (heat-stress, 120 min, recovery 15 min)
Leaf (heat-stress, 120 min, recovery 60 min)
Leaf (heat-stress, 120 min, recovery 120 min)
Leaf (dry season, irrigated field)
Leaf (dry season, rainfed field)
Leaf (wet season, irrigated field)
Leaf (wet season, rainfed field)
Root
Root (heading stage)
Root (tillering stage)
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
-0.66 3.95 -1.67 - - - 0.9 - -0.51 -2.21 - -0.36 - - - - - -4.37 - -5.7 - - - - - - - - - - - - - - - - - - - - -1.41 - - 4.5 - 2.59 - - -
1.5 3.41 -1.06 -3.66 -5.09 -4.76 -1.69 -2.91 -0.04 -2.9 -0.29 1.2 -3.48 -1.26 -1.68 -1.0 -0.78 -1.07 -6.95 -2.34 -6.54 -6.52 -5.61 -6.82 -0.22 -3.19 -4.96 -5.13 -2.7 -2.85 -1.74 -4.37 -8.03 -2.95 -5.73 -3.89 -7.83 -5.46 -4.3 -5.98 -6.2 -5.32 -5.68 3.59 2.59 1.89 1.34 0.36 -5.06
0.68 3.22 -3.38 -8.6 -7.15 -8.4 0.28 0.25 -1.37 -4.51 0.25 -2.31 -1.77 1.11 -5.07 -3.47 0.7 -1.73 -3.94 -1.56 -7.17 -5.04 -4.95 -5.63 1.84 -4.25 -5.15 -3.05 -2.98 -3.66 -3.51 -6.06 -7.75 - -7.46 -6.23 - -4.79 -5.27 -5.92 -5.67 -5.95 -5.48 4.05 1.74 1.13 1.11 -1.88 -6.19
-1.29 -0.55 -3.24 1.06 -0.06 3.91 0.16 0.1 -2.15 -1.07 -0.89 -3.9 -1.99 -1.85 0.46 0.78 -0.71 -1.24 -1.84 0.25 -6.5 -5.49 -6.41 -5.69 -1.11 0.02 -0.6 - -7.77 -6.59 -6.27 -4.82 -7.47 - -5.96 -6.7 -7.8 -6.94 -5.5 -5.96 -4.58 -4.84 -4.29 4.02 -1.55 -1.9 -2.01 -1.81 -1.98
-0.95 3.92 -1.85 -5.88 -4.44 - -3.42 -2.7 -0.61 -4.4 -1.88 -3.19 -5.08 -1.33 - - 1.56 -5.29 - -5.47 - -9.02 -6.41 - - - - -5.1 -4.38 - -5.25 - - - - - - - - -7.7 - -7.96 - 4.14 2.21 1.76 1.28 -3.72 -
-3.39 2.92 - - - - -0.01 0.95 1.24 -1.45 -4.82 - - - - - - - - - - -3.9 - - - - - - - - - - - - - - - - - - -4.08 - - 5.15 - - - - -
-2.79 2.81 -1.64 - - 0.14 -2.47 -3.45 -0.8 1.2 -1.67 -3.4 -0.25 0.1 - 0.89 -2.26 0.75 - -0.73 - -0.85 - -1.37 0.03 -0.39 - -2.9 - - -0.53 -3.17 -1.14 - - - - - - - -4.38 -4.0 -3.89 4.29 -0.87 -0.89 1.96 0.89 -
-1.61 1.39 - -3.05 -2.94 - -2.37 -2.61 -2.09 -1.88 -0.9 1.25 -1.51 -2.84 - - -2.05 -3.3 -4.76 -2.15 -5.48 -4.52 - -3.69 -0.84 - - - - - - -0.94 - - - - - - - -3.86 -3.85 - -3.72 5.23 0.87 -2.75 - - -
-3.39 3.62 - - - - - - -0.25 - 0.76 -0.58 - - - - - 0.21 - - - - - - - - - - - - - - - - - - - - - - - - - 5.01 - - - - -
-4.14 3.65 - - - - 1.6 1.17 1.97 1.31 -0.02 -2.47 -0.15 -1.86 - - - -1.02 - 0.78 -3.15 - - -3.07 - 0.47 - - - - - -1.18 - - - 0.13 - - - -2.54 -4.61 - - 4.03 -1.28 - - - -
- 3.63 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 5.01 - - 2.15 - -
1.02 3.38 -1.85 -3.66 -4.31 -6.86 -1.09 -1.02 -1.05 -4.1 -1.06 -3.84 -2.07 0.52 -2.19 -0.59 0.19 -0.72 -3.88 -2.13 -5.29 -5.18 -4.17 -5.13 1.91 -2.39 -4.98 -3.7 -1.97 -2.63 -1.41 -4.23 -5.69 -4.9 -5.2 -4.7 -4.62 -3.39 -3.69 -3.89 -3.77 -4.18 -4.16 3.65 2.12 1.26 1.72 0.27 -3.54
- 1.59 - - - - -2.75 - -1.34 - -4.82 - - - - - - - - -1.52 - - - - - - - - - - - -0.45 - - - - - - - - - - - 5.47 - - - - -
0.88 2.87 -2.12 -0.57 1.87 -0.01 -1.43 0.25 - - -4.08 - - 0.43 - - -1.66 -2.62 - - - - - - - - - - - - - - - - - - - - - - - - - 4.45 - - 0.67 2.87 -
1.97 3.83 -1.72 -7.18 -6.4 -8.66 -2.09 -2.49 -1.55 -4.99 -1.83 -2.72 -2.62 0.59 -6.49 -4.46 0.91 -2.93 - -1.89 -6.94 -6.38 -5.11 -6.64 -2.91 -1.66 -3.82 -4.78 -2.63 -4.69 -3.18 -6.46 -8.12 -6.5 -6.23 -6.16 -6.14 -3.9 -4.5 -5.6 -5.46 -6.86 -6.18 3.8 2.34 1.13 1.17 -0.66 -5.28
1.0 1.8 -0.06 -4.7 -3.33 2.53 -0.77 -0.55 0.09 -2.19 -1.57 0.86 0.58 0.03 -0.18 -0.91 0.36 0.26 0.0 -0.72 -1.24 -0.84 -1.68 -0.51 -2.09 0.93 0.41 -0.73 -1.43 -1.51 -1.01 -1.07 -1.83 -2.2 -1.43 -1.4 -0.66 -1.52 -1.2 -1.28 -0.35 -0.54 0.18 3.15 -0.34 -0.86 -2.09 -4.54 -
1.58 3.21 -2.31 -8.55 -8.93 -10.18 -1.28 -1.54 -0.75 -4.16 -0.25 -0.72 -2.15 -0.45 -3.25 -2.6 -0.57 -1.52 -2.07 -1.28 -4.53 -4.54 -4.32 -4.84 2.14 -3.55 -3.61 -3.39 -2.52 -2.54 -1.51 -3.34 -4.45 -4.68 -4.68 -3.76 -5.0 -4.35 -4.28 -4.9 -5.36 -3.81 -4.18 3.25 2.38 1.11 2.24 1.2 -0.41
-0.29 4.07 - -0.23 - - - - - - -1.12 - - - - - -0.83 - - - - - - - - - - - - - - - - - - - - - - - - - - 4.88 - - - - -
- 1.85 - - - -0.53 -4.87 - - -2.11 -0.17 -1.68 -1.02 -1.24 - - - -3.26 - -2.79 - - - - - - -1.84 - - - - - - - - - - - - -5.07 - - - 4.74 3.76 0.66 - - -
-1.82 3.87 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 5.09 - - - - -
-1.23 2.59 -6.12 -10.89 - -11.1 -0.94 -1.39 -2.66 -3.35 -0.92 -2.38 -1.68 -0.05 -0.38 -0.18 -4.89 -0.96 -2.31 -1.86 -5.13 -4.34 -5.09 -4.61 -0.56 -1.73 -3.91 -5.05 -4.63 -3.82 -4.26 -4.23 -4.99 -5.69 -4.7 -5.07 -4.59 -4.25 -4.67 -3.13 -3.19 -2.9 -2.79 3.58 2.89 2.28 3.11 0.68 -4.17
-1.46 2.89 -2.21 - - - - -3.19 -0.81 -2.21 -5.68 -2.01 - - - - - -2.91 2.29 - -4.88 -3.59 - -1.52 - -0.65 - - - - - -1.15 - - - - -1.44 - - -3.51 -3.82 - - 3.41 -0.99 -0.12 2.24 3.04 2.96
-4.17 -1.66 - -4.96 -0.74 3.88 -5.93 -3.4 -1.35 -4.36 -4.14 0.09 -6.15 -3.35 -4.18 - -3.65 -3.5 -2.45 -3.17 -6.21 -5.16 -4.55 -5.52 - -5.58 -4.49 -5.07 - -4.18 - -5.63 -4.15 -3.83 -5.22 - - - -5.48 -4.48 -5.03 -5.29 -3.62 4.48 1.81 0.93 1.13 -1.47 -4.1
- 2.69 -4.58 - - - -3.06 -4.7 -2.43 - -4.68 - - -0.3 - - -3.92 0.01 - -2.32 -5.47 -5.09 -3.05 - - - - - - - - -3.05 - - - - - - - - -5.03 - -4.19 5.23 0.92 -2.29 - - -
0.54 2.75 - 0.61 0.76 - - - 0.2 - -2.73 - - - - - - -1.64 - - - - - -1.04 - - - - - - - - - - - - - - 1.01 - - - - 4.79 1.88 - 1.07 - -
-2.33 4.11 - - - - - -3.13 2.65 -3.38 0.61 - - - - - 0.25 -3.74 - -5.91 - - -3.33 -3.5 - - - - - - - - - - - - - - - - - - - 4.38 - - - - 0.27
-2.0 2.72 - -3.52 - - -3.38 - - - -4.3 - -0.73 -2.54 - - -1.71 -1.89 - -5.32 -4.98 - - - - - - - - - - -2.08 - - - - -1.05 - - - - - - 5.21 - -1.8 1.23 - -
-0.18 2.14 - -2.88 - 3.2 -3.08 -1.0 0.85 - -2.71 - -1.71 0.24 - - 0.15 -6.47 - - -3.91 - - -3.08 - - - - - - - -2.77 - - - - - - - - - - - 4.65 0.87 0.49 -1.15 - -
- 3.3 - - - 3.19 - - 1.33 - -3.88 - - - 2.24 - - -2.31 - - - - - - - - - - - - - - - - - - - - - - - - - 4.49 - - - - -
- 2.95 - - - - - - - - -2.46 - - - - - - -0.36 - - - - -2.55 - - 0.66 - - - - - - - - - - - - - - -2.94 - - 5.22 - 0.16 - - -
-2.74 2.09 -4.39 - - - 0.42 1.74 -0.56 -4.53 -2.98 -0.26 - -0.09 0.09 0.1 - -2.14 - 0.13 -4.84 - - -4.94 - 0.72 -1.23 - - - - - - - - - - -0.56 - -4.55 - -2.62 -2.21 4.71 1.64 -0.76 -0.55 - -
-1.29 3.63 -4.55 -7.07 -4.15 -8.26 -4.79 -5.26 -0.39 -4.01 -1.79 -2.22 -3.56 -0.52 -2.3 -2.05 -2.64 -2.89 -3.2 -0.55 -7.44 -7.04 -5.45 -7.13 0.5 -3.66 -5.07 -4.71 -4.12 -3.51 -2.76 -5.42 - -6.93 -7.53 -7.81 -9.45 -5.78 -7.26 -6.47 -6.67 -4.97 -5.82 4.15 2.21 1.6 1.88 0.32 -5.86
-1.11 1.39 - -0.87 -3.89 -2.23 - -1.95 -0.84 - -4.15 -2.21 0.1 0.05 0.5 - -2.42 -1.04 - -3.75 -2.76 -3.16 -3.61 -2.15 - -1.98 - -1.62 - - -1.54 -3.54 - -1.1 -1.54 - 0.45 - 0.29 -3.45 - -2.58 -4.04 5.1 - - -1.91 - -
-0.83 2.49 - - - - - -3.3 - -1.23 -2.72 - - - - - - -5.7 - - - - - -3.31 - - - - - - - - - - - - - - - - - - - 4.61 2.51 3.17 - - 1.52
-4.63 3.19 -3.23 - - - -2.71 -3.29 - -2.53 -3.32 - - - - - -3.5 -6.58 - -4.16 - - - - - - - - - - - -1.99 - - - - - - - -4.4 - - -3.78 4.94 - - 2.57 0.09 0.12
-0.43 3.45 -1.06 - - 0.78 - -1.47 0.91 - -2.86 0.76 - 2.14 - - - - - -6.25 -1.26 -2.77 -3.47 -2.48 - - - - - - - 1.22 - - - - - - - - - - - 4.04 - 0.11 2.28 0.11 -
-6.34 2.43 -3.73 -2.62 -2.49 - - -2.11 - - -4.43 - - - - - - -5.54 - - - - -5.03 - - - - - - - - -2.48 - - - - - - - - -5.49 - - 5.36 - - 0.74 - -
-5.65 2.77 - - - - - - - - -3.65 -2.33 - - - - - -6.21 - -1.55 - - -4.91 -4.74 - - - - - - - - - - -0.63 - - - - - - - - 5.29 -0.95 0.19 - - -
-4.27 2.9 - - - - - -2.56 -0.95 - -4.39 -2.54 1.6 2.86 - - 0.71 0.41 - -0.11 -4.39 - - -4.16 - - - 0.06 - - - -0.78 - - - - - - - -1.89 -1.26 -0.79 -1.61 4.53 - - - - -
- 2.38 - - - - - -1.48 - - -4.8 - - - - - - - - - - - -2.08 - 4.02 - - - - - - - - - - - 2.85 - - -2.14 - - - 4.29 - - - - -
0.81 3.86 -1.64 -6.09 -8.83 -2.47 -1.32 -2.45 0.51 -4.88 -1.87 -3.14 -5.48 -1.02 -8.46 -4.4 0.65 -3.4 -5.72 -3.95 -9.44 -7.54 -7.9 -7.82 -1.83 -4.55 -6.54 -5.76 -3.23 -4.76 -3.48 -7.87 -9.33 -6.8 -7.91 -6.79 -8.0 -5.52 -7.05 -9.32 -8.36 -9.41 -9.7 4.06 2.4 1.08 0.99 -0.57 -5.14
-2.62 1.34 - -4.34 -3.23 -0.15 -2.66 -1.85 -4.05 - -8.02 0.93 - - -1.2 - -5.78 -6.2 - -6.28 -4.32 - - -4.21 - - -2.47 - -2.37 - - -0.65 - - - -2.34 - -1.8 - -2.13 -2.44 -0.63 -0.63 5.25 -0.57 -1.94 - -2.8 -
1.61 0.94 -1.27 -2.39 -2.82 2.62 -0.46 -0.95 0.14 -1.06 -0.7 -0.62 -0.58 -0.05 -0.38 -0.23 1.18 -0.68 0.25 -0.13 -1.94 -1.36 -1.85 -2.55 1.17 -0.92 -0.87 -1.45 -1.72 -2.22 -2.42 -1.12 -2.28 -4.67 -2.62 -2.66 -2.82 -2.38 -2.0 -2.07 -1.49 -1.49 -1.42 3.33 0.6 0.34 -0.14 0.01 0.67
-4.36 3.77 - - - - - - - -1.96 -7.96 - - - - - - - - - - - - -2.73 - - - - - - - -1.42 - - - - - - - - - - -1.03 5.09 - - - - -
-1.72 -0.11 0.93 -4.95 0.74 3.61 -1.8 -2.77 -0.84 -4.17 -1.41 -5.44 -3.76 -2.37 -3.38 -2.34 0.45 -1.68 -0.33 0.33 -5.95 -4.6 -6.68 -5.13 -4.21 -1.33 -3.66 - - -5.51 - -7.41 - - - -5.53 - -4.98 - -7.55 -7.95 -5.99 -5.74 4.35 -1.29 -0.65 1.96 -4.89 -3.72
-0.27 2.38 -3.4 -2.82 -0.15 0.72 -4.96 -3.96 -3.5 - -3.34 - 0.95 2.25 - - 0.38 -1.34 - -5.78 - - -6.18 - - - - - -0.8 - - -3.66 - - - - - - - - - - - 4.01 3.08 2.28 -0.86 -0.3 -
0.05 2.99 - - - 0.14 - - -1.88 -3.6 -1.56 - - - 1.02 1.03 -3.62 -2.85 - -0.99 - - -3.7 - - - - - - - - - - - - - - - - - -3.01 -0.29 - 4.27 3.19 2.0 - - -
0.48 3.61 -1.57 - - - - - -0.96 - -5.24 - - - 2.95 1.97 - -3.63 - - - - - - - - - - - - - -1.12 - - - - - - - - - - - 4.41 0.17 - - - -
-0.75 2.22 - - - - - - - - -4.45 -1.45 - -1.38 - - - - - - - - -2.92 -3.23 - - - - - - - 0.08 - - - - - - - - - - - 5.33 0.37 - - - -
-1.2 1.91 -2.24 - -5.78 - 1.3 0.79 -0.04 -1.03 -0.97 -3.92 -2.6 -0.2 -2.05 -0.0 -0.17 -1.77 -0.32 -1.46 -4.02 -3.69 -4.44 -3.95 -0.17 -0.37 -1.31 - - - -3.09 -2.99 - - - - - - - -5.65 -4.81 -3.73 -4.66 4.28 2.94 0.9 0.94 -3.8 -
-4.0 -0.26 - 1.23 - 4.31 -2.19 -4.66 -4.77 -4.9 -7.37 - -3.94 - - - -4.89 -5.8 - -3.15 -5.34 -5.46 -6.59 -5.01 - -2.39 - - - - - -4.95 - - - - - -1.51 -3.21 -5.66 -5.69 - -4.13 4.58 -1.41 -2.71 - - -
-1.0 3.39 - - - 0.78 - - - 0.36 - - - - - - - - - - - - - - - - - - - - - 2.32 - - - - - - - - - - - 4.91 - - - - -
1.27 0.46 -0.87 -2.28 -6.64 2.41 0.49 0.34 -0.33 -2.38 -1.07 0.88 0.22 0.85 -0.88 -0.05 1.07 -1.4 0.23 0.09 -2.14 -2.29 -2.24 -2.59 1.35 -1.58 -0.79 -1.77 -2.77 -1.67 -2.19 -1.46 -3.44 -4.69 -1.87 -2.04 -3.64 -1.49 -2.83 -2.91 -2.37 -2.6 -2.11 3.44 0.43 -0.13 -0.01 0.09 0.29
1.5 2.89 -4.01 -2.32 -0.89 -4.19 -1.15 -1.36 -2.59 -4.1 -1.2 -5.09 -2.64 0.74 -1.42 -0.87 0.81 -2.53 -1.49 -2.68 -7.76 -6.98 -6.37 -7.17 -0.98 -2.55 -4.24 -4.95 -3.8 -4.73 -2.08 -5.71 -8.04 -5.46 -6.76 -6.29 -7.13 -4.81 -5.55 -8.06 -8.14 -8.09 -8.14 4.23 2.09 1.53 1.61 -0.37 -2.81
-3.25 1.9 - - - -2.35 - -1.86 -3.34 -2.78 -2.84 0.54 -1.87 1.26 - - -0.97 0.61 - -4.35 -3.76 -4.14 -3.07 -3.84 0.7 - - - -0.24 - - -1.13 - - -1.2 - - - - -4.11 -1.92 -0.69 -2.55 3.5 2.53 2.69 3.25 - -1.93
-4.82 3.34 - - - -0.47 - - - -3.31 - -2.0 - -0.67 - - - - - - - - - -0.27 - - - - - - - 1.04 - - - - - - - -3.65 - - - 4.87 - - - - 2.34
-5.47 1.7 -4.31 - - -2.77 -3.38 -1.56 2.28 - -7.03 -2.76 -2.49 - - - -5.58 -0.47 - -6.37 -4.97 -2.95 -4.05 -2.91 - -2.25 - - - - - -2.07 - - - - - - - -6.03 -3.96 -3.71 -4.9 4.14 3.6 3.0 -1.35 - -
-3.8 1.95 -0.34 - - - - - 0.21 - -3.25 - - -0.3 - - -3.36 - - - - - - - 1.35 -0.22 - - - - - - - - - - - - - - - - - 5.24 - - -0.05 - -
- 2.18 - - - - 1.13 -2.16 - -3.4 -3.81 - -1.28 0.68 - - - -1.98 - 0.8 - -3.63 - -1.57 1.34 - -0.14 - - - - - - - - - - - 0.87 -1.67 -3.87 -2.78 - 4.99 - - - - -
-0.77 2.27 -3.59 -10.39 -9.03 -4.5 1.18 1.11 -1.46 -2.84 -0.98 -1.21 -0.2 0.81 1.49 2.03 -2.96 0.27 -0.45 0.08 -1.93 -1.08 -1.31 -1.04 -0.26 -1.59 -1.21 -1.16 -1.16 -2.94 -3.28 -3.43 -1.82 -2.57 -1.28 -1.47 -1.5 -1.27 -1.58 -1.03 -1.37 -0.44 -0.44 2.95 2.13 1.34 0.06 -3.14 -
-0.11 2.88 -2.7 -8.63 -9.41 -7.48 1.37 1.03 -2.23 -3.34 -0.05 -2.05 0.47 1.47 0.64 0.93 -0.92 -0.53 0.49 -0.69 -2.72 -3.42 -3.3 -3.44 0.47 -2.77 -1.65 -1.89 -1.83 -2.97 -1.59 -2.99 -2.76 -2.97 -3.15 -2.75 -1.86 -2.73 -2.85 -2.78 -3.1 -2.59 -2.38 3.39 1.94 0.96 0.91 -2.19 -
-0.36 0.89 -2.36 -1.89 -1.42 3.22 -4.78 -2.34 2.13 -5.1 -3.34 -3.56 1.64 0.83 -1.24 -0.05 -2.35 -0.48 - -3.29 -3.16 -4.79 -3.13 -3.66 - -3.62 -2.93 -3.25 -4.43 -3.39 -4.29 -2.64 - - -1.54 -4.4 - -3.02 - -4.26 -3.48 -3.66 -2.21 4.45 -4.68 -2.41 - - -4.18

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.