Heatmap: Cluster_139 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00001p00271500 (evm_27.TU.AmTr_v1.0_scaffold00001.490)
1.34 0.6 0.84 -1.58 -0.75 -5.85 -1.57 -1.05 -0.32 -0.22 -0.61 -0.8 0.4 1.43 -0.1 -0.08 -2.35 -0.77 -0.5 0.46 0.16 0.7
AMTR_s00002p00271240 (evm_27.TU.AmTr_v1.0_scaffold00002.616)
0.44 1.2 0.28 1.88 -2.58 -0.33 -0.45 -1.78 -2.06 -1.68 1.43 0.77 -1.12 -1.82 -0.71 0.55 -1.58 -0.66 -0.29 0.29 -2.86 -0.92
AMTR_s00002p00271290 (evm_27.TU.AmTr_v1.0_scaffold00002.620)
1.15 1.07 1.24 -2.35 -2.23 - -1.73 - -1.83 -2.05 0.67 0.9 1.0 1.14 -0.36 -1.14 -0.21 0.07 0.02 -0.76 -1.05 0.26
AMTR_s00003p00242450 (evm_27.TU.AmTr_v1.0_scaffold00003.263)
- - 0.52 -4.65 -2.28 - - - -10.82 -9.34 0.78 0.81 3.12 0.37 0.64 -1.64 -1.63 -1.72 -0.57 1.08 -1.66 0.31
AMTR_s00003p00261880 (evm_27.TU.AmTr_v1.0_scaffold00003.349)
1.57 2.28 1.64 -0.22 0.23 -2.83 -4.74 -8.22 -5.19 -4.48 -0.44 -0.07 1.13 0.47 -0.15 -0.95 -0.9 -1.84 -1.72 -1.71 -4.74 -0.74
AMTR_s00005p00155460 (evm_27.TU.AmTr_v1.0_scaffold00005.47)
- - - -1.51 -1.88 - -6.8 - -5.95 -6.15 -1.32 -4.45 2.42 0.41 -1.8 3.14 -5.5 -0.32 0.14 1.03 -1.79 -0.28
AMTR_s00005p00198670 (evm_27.TU.AmTr_v1.0_scaffold00005.76)
1.57 0.37 -0.22 -0.87 -0.24 -4.68 -4.02 -8.47 -1.02 -1.32 -0.39 0.97 1.93 1.31 -0.12 -1.45 -1.63 -2.05 -1.3 -0.86 -0.49 0.98
AMTR_s00007p00267760 (evm_27.TU.AmTr_v1.0_scaffold00007.384)
-1.08 -1.28 -0.98 -2.4 -1.67 -2.85 -5.13 -8.23 -5.67 -5.51 0.61 0.87 1.98 0.08 1.31 -1.2 -0.25 2.26 1.22 -1.38 -3.74 -2.3
AMTR_s00010p00144270 (evm_27.TU.AmTr_v1.0_scaffold00010.105)
0.46 0.38 1.19 1.54 -2.39 -3.86 -9.29 - -8.97 -8.29 1.63 1.29 1.14 -4.65 -2.31 -3.18 0.45 0.33 -0.07 -1.87 -1.7 0.69
AMTR_s00011p00247840 (evm_27.TU.AmTr_v1.0_scaffold00011.148)
1.69 2.36 1.54 -0.35 -2.46 -4.98 -8.92 - -8.39 -7.79 0.19 0.31 1.9 -0.26 -1.39 -6.28 0.53 -2.45 -3.85 -0.95 -5.06 -3.24
AMTR_s00011p00256600 (evm_27.TU.AmTr_v1.0_scaffold00011.174)
- - - - - - - - - - - - 3.53 2.37 -1.65 - - - 2.23 - - -1.97
AMTR_s00012p00263620 (evm_27.TU.AmTr_v1.0_scaffold00012.346)
- - - -3.12 -0.5 - - - -4.29 - 1.46 1.25 3.06 -3.26 1.71 - 0.53 0.06 0.08 -0.47 - -
AMTR_s00013p00060560 (evm_27.TU.AmTr_v1.0_scaffold00013.22)
- - - - 0.69 - - - - - 0.74 - 3.04 2.71 0.79 - - - 1.12 - - -
AMTR_s00016p00254390 (evm_27.TU.AmTr_v1.0_scaffold00016.322)
1.1 1.31 2.13 -2.66 -2.92 -0.28 -0.54 -2.39 -0.18 -0.47 0.67 -3.13 1.51 -0.45 -0.83 -1.27 -1.96 -1.92 -8.94 -2.12 - 1.25
AMTR_s00019p00255670 (evm_27.TU.AmTr_v1.0_scaffold00019.444)
-0.92 -3.63 -6.15 -8.29 -4.13 - -6.5 - - -10.53 -3.99 -1.28 3.64 1.34 2.44 -4.65 - -5.87 - -9.5 - -1.56
AMTR_s00023p00178080 (evm_27.TU.AmTr_v1.0_scaffold00023.113)
0.48 0.77 0.5 2.98 -2.11 - - -8.0 - - 1.78 -0.16 1.83 -3.7 -1.69 -3.63 -0.87 -1.94 -3.24 -7.08 -4.41 -7.88
AMTR_s00023p00178300 (evm_27.TU.AmTr_v1.0_scaffold00023.114)
1.6 1.38 1.66 0.77 -0.98 -5.52 -9.69 - - -9.61 2.3 0.03 1.67 -3.54 -2.2 -2.58 -0.04 -2.29 -2.47 -8.61 - -9.82
AMTR_s00024p00085480 (evm_27.TU.AmTr_v1.0_scaffold00024.40)
2.02 1.86 0.34 1.42 -2.08 -5.34 -8.14 -7.97 - - 1.09 0.47 1.39 -1.09 -0.33 -5.98 0.63 -2.15 -2.93 -0.86 - -2.23
AMTR_s00024p00139650 (evm_27.TU.AmTr_v1.0_scaffold00024.87)
- - - - -3.01 - - - - - - -0.56 4.13 -2.93 -4.56 - -1.7 0.25 -0.15 -0.61 - -0.93
AMTR_s00024p00204640 (evm_27.TU.AmTr_v1.0_scaffold00024.186)
1.34 3.03 1.55 1.24 -4.81 -4.41 -11.42 -9.6 -8.08 -8.43 0.34 -2.09 1.89 -9.29 -12.02 - -0.5 -5.65 - -8.86 - -8.24
AMTR_s00025p00227410 (evm_27.TU.AmTr_v1.0_scaffold00025.325)
- - - - - - - - - - - - 4.39 - - - - - - - - -0.04
1.14 1.82 1.53 1.89 -8.19 -4.39 -10.66 -7.81 -13.36 -12.78 1.84 -7.16 0.91 -8.91 -10.59 -1.11 0.35 -0.02 -7.53 -9.87 - 0.51
AMTR_s00030p00238280 (evm_27.TU.AmTr_v1.0_scaffold00030.205)
1.66 1.07 1.99 0.96 -1.62 -3.59 -9.68 - - -9.33 1.68 -0.22 1.23 -1.7 -1.51 -5.54 0.56 -1.46 -1.06 -0.42 -2.15 -5.87
AMTR_s00032p00021630 (evm_27.TU.AmTr_v1.0_scaffold00032.5)
0.45 1.79 1.28 - -6.14 - -8.62 - - -10.62 -0.23 -1.21 2.27 -2.42 -2.87 2.87 -2.95 -1.56 -3.26 -4.4 -5.41 -1.64
AMTR_s00032p00116380 (evm_27.TU.AmTr_v1.0_scaffold00032.80)
-0.25 -6.64 1.48 1.27 0.27 -3.27 -2.06 -6.94 -1.08 -1.08 0.49 0.53 0.36 0.39 0.45 -1.25 0.4 0.38 -0.25 0.03 -0.72 0.16
AMTR_s00038p00214580 (evm_27.TU.AmTr_v1.0_scaffold00038.176)
- - - - - - -3.15 - -4.36 - 0.08 - 3.03 3.56 -0.6 - - - - - - -2.6
AMTR_s00038p00214760 (evm_27.TU.AmTr_v1.0_scaffold00038.178)
- - - - -4.02 - -2.19 - -3.04 -3.06 0.66 - 2.75 3.46 0.93 - - - - - - -2.06
AMTR_s00039p00169050 (evm_27.TU.AmTr_v1.0_scaffold00039.126)
- - - 3.47 -2.12 - - - - - 3.09 -0.32 -0.59 -5.78 -0.77 - -5.05 - - - - -3.59
AMTR_s00040p00095090 (evm_27.TU.AmTr_v1.0_scaffold00040.56)
- - - - -1.54 - - - - - 0.73 1.21 2.67 2.71 0.83 -1.16 -2.73 -1.79 -0.95 -1.69 -0.94 -0.4
AMTR_s00041p00237820 (evm_27.TU.AmTr_v1.0_scaffold00041.301)
- - - - -2.89 - - - - - -1.15 -1.35 4.04 1.1 - 1.26 - - - - - -
AMTR_s00042p00185900 (evm_27.TU.AmTr_v1.0_scaffold00042.50)
0.27 0.1 -0.88 -0.49 -1.25 -6.79 -5.05 -3.73 -5.01 -4.94 -0.01 0.4 2.8 0.25 1.28 -5.01 0.15 0.8 0.11 -0.46 -4.07 -1.92
AMTR_s00045p00105700 (evm_27.TU.AmTr_v1.0_scaffold00045.99)
0.77 1.65 -1.06 -3.5 -4.04 - -6.12 - - -10.16 0.55 1.21 1.7 1.66 -0.97 -1.0 -0.52 0.12 0.3 -0.75 -2.42 0.58
AMTR_s00046p00141180 (evm_27.TU.AmTr_v1.0_scaffold00046.72)
- - - - - - - - - - - - 4.16 - 0.16 - - - - - - 1.58
AMTR_s00049p00134910 (evm_27.TU.AmTr_v1.0_scaffold00049.115)
1.53 0.55 1.57 2.35 -2.4 - -4.74 -7.2 0.47 0.66 0.74 -0.36 0.45 -4.03 -1.22 -1.77 -0.73 -2.4 -2.11 -2.2 -4.87 -1.01
AMTR_s00057p00076610 (evm_27.TU.AmTr_v1.0_scaffold00057.47)
-0.03 1.16 -0.5 1.84 -0.45 -3.61 -1.21 -0.62 -0.65 0.02 0.68 -0.02 0.45 -2.85 0.44 - 0.92 -0.54 -0.47 -0.17 -2.89 0.25
AMTR_s00057p00121410 (evm_27.TU.AmTr_v1.0_scaffold00057.99)
-1.11 2.66 2.0 2.09 -3.08 -3.36 -6.91 - -5.78 -5.82 0.41 0.16 -0.03 -2.75 -2.41 -3.34 0.79 -3.55 -2.72 -2.25 -4.71 -0.63
AMTR_s00060p00173650 (evm_27.TU.AmTr_v1.0_scaffold00060.111)
- - - - -0.46 - - - - - 0.09 2.83 1.97 -0.0 1.48 - 1.38 - 0.66 - - 0.27
AMTR_s00066p00168590 (evm_27.TU.AmTr_v1.0_scaffold00066.195)
- - - - 1.02 - -5.93 - -7.68 - 0.18 -1.68 2.88 1.5 1.69 -1.66 1.55 -3.87 -2.6 0.01 -2.03 -1.52
AMTR_s00067p00166150 (evm_27.TU.AmTr_v1.0_scaffold00067.168)
0.81 1.4 1.74 -4.71 0.91 -0.78 -1.64 -1.45 -1.74 -1.7 0.04 -0.19 1.02 1.67 0.39 -1.42 -1.59 -3.78 -2.54 -1.8 -3.31 -0.49
AMTR_s00067p00188650 (evm_27.TU.AmTr_v1.0_scaffold00067.202)
2.44 1.79 2.05 0.56 -2.01 -2.22 -8.41 -10.73 -7.86 -7.95 0.7 -3.3 2.4 -8.46 -5.85 -9.62 -11.04 -9.25 -9.31 -8.72 - -6.96
AMTR_s00068p00160230 (evm_27.TU.AmTr_v1.0_scaffold00068.111)
1.69 1.19 2.26 -5.66 -0.18 -3.92 -6.31 -9.19 -7.69 -5.95 -1.41 -1.41 1.67 1.46 0.51 -2.27 -1.28 -1.5 -2.7 -0.52 -5.52 -0.44
AMTR_s00070p00181900 (evm_27.TU.AmTr_v1.0_scaffold00070.115)
-4.09 -3.36 -0.32 -1.15 -3.75 -7.08 -8.16 -4.58 -10.63 -11.55 -1.3 -2.2 2.82 1.36 0.32 2.93 -3.95 -3.18 -2.82 -1.24 -2.55 -1.24
AMTR_s00078p00168600 (evm_27.TU.AmTr_v1.0_scaffold00078.158)
- - - - 1.08 - -4.05 - -3.51 -2.27 -1.21 -0.42 2.88 3.15 0.84 - -2.56 - - -3.88 - -4.26
AMTR_s00079p00140660 (evm_27.TU.AmTr_v1.0_scaffold00079.58)
- 1.7 - - -2.4 - -8.19 - -7.25 - 0.79 -0.27 2.97 2.24 -0.52 0.51 -0.8 -1.9 -2.66 -4.3 -3.86 -2.11
AMTR_s00089p00051730 (evm_27.TU.AmTr_v1.0_scaffold00089.15)
- - - - -0.83 - -4.73 - -4.37 -4.99 1.03 0.39 2.84 2.03 0.27 1.08 0.27 -0.49 -0.89 -2.41 -1.54 -1.21
AMTR_s00092p00019210 (evm_27.TU.AmTr_v1.0_scaffold00092.6)
1.53 0.21 2.17 2.41 -5.71 - - - -9.02 - 2.29 0.67 0.41 -3.38 -3.91 - -2.75 - - - - -5.63
AMTR_s00096p00127740 (evm_27.TU.AmTr_v1.0_scaffold00096.81)
- - - - 2.05 - -3.94 - - - - - 2.72 0.42 2.54 - - - - 1.94 - -2.19
AMTR_s00098p00138460 (evm_27.TU.AmTr_v1.0_scaffold00098.40)
-3.69 -3.48 - - -1.32 - -6.24 - - - -0.91 - 3.55 2.72 -0.57 0.28 - -1.69 -2.63 - - -2.48
AMTR_s00102p00061000 (evm_27.TU.AmTr_v1.0_scaffold00102.27)
-0.58 -1.44 -1.79 0.69 0.83 -3.87 -6.3 -6.05 -6.5 -6.46 0.66 1.01 1.34 -0.55 1.88 0.29 -1.29 0.87 0.33 -0.86 -1.93 0.18
AMTR_s00131p00038170 (evm_27.TU.AmTr_v1.0_scaffold00131.21)
1.05 1.64 2.06 -2.38 -0.74 -3.37 -4.16 -9.01 -5.56 -4.0 -0.8 0.42 0.72 1.44 -1.44 2.01 -3.77 -2.75 -2.5 -2.41 -3.37 -2.05
AMTR_s00136p00069360 (evm_27.TU.AmTr_v1.0_scaffold00136.33)
0.4 0.38 -0.66 -2.29 -1.78 -7.5 -8.71 -11.6 -10.19 -10.93 0.85 0.35 2.63 -3.19 0.43 -8.18 -1.1 2.13 1.41 -6.63 - -6.01
AMTR_s00137p00072760 (evm_27.TU.AmTr_v1.0_scaffold00137.34)
0.21 1.46 1.58 -2.02 -2.55 0.66 0.8 -4.47 0.0 0.4 -2.84 -4.42 2.0 -0.68 -1.1 -5.31 -1.62 -1.89 -1.0 -2.69 -5.5 1.28
AMTR_s00148p00014950 (evm_27.TU.AmTr_v1.0_scaffold00148.1)
0.89 1.66 1.31 2.41 -1.3 -4.83 -2.07 -8.49 -2.1 -2.37 0.25 0.41 0.11 -3.63 -0.46 -4.3 -0.99 0.72 -0.11 -1.41 -2.88 -4.22
AMTR_s00148p00015200 (evm_27.TU.AmTr_v1.0_scaffold00148.2)
-0.06 1.86 1.37 2.12 -1.19 -3.18 -5.43 -8.41 -3.07 -3.72 0.66 0.2 0.13 -4.29 -0.06 -4.04 0.47 0.75 -0.35 -0.9 -1.5 -3.74
AMTR_s00169p00070560 (evm_27.TU.AmTr_v1.0_scaffold00169.43)
-0.47 -0.4 -0.35 2.37 -3.71 -7.85 -7.96 -8.16 -9.18 -8.59 2.18 0.45 0.57 -5.28 -3.62 -2.35 1.33 -1.04 -0.18 -2.69 -0.92 1.14
AMTR_s00170p00037010 (evm_27.TU.AmTr_v1.0_scaffold00170.14)
2.1 2.04 1.08 -9.97 -3.98 -4.72 -6.33 - -3.36 -4.41 -2.84 -3.54 2.2 1.81 -1.38 -1.6 -3.1 -5.0 -5.36 -2.16 -4.47 0.8
AMTR_s00170p00059090 (evm_27.TU.AmTr_v1.0_scaffold00170.28)
-0.46 1.7 1.6 -1.24 -0.25 - -1.09 - -1.03 -1.31 0.03 0.22 1.54 1.68 0.62 - -2.91 - -0.95 -1.69 -0.2 -0.5
AMTR_s00171p00054690 (evm_27.TU.AmTr_v1.0_scaffold00171.37)
0.52 1.31 1.21 0.19 -0.65 -1.36 -0.55 -2.12 -1.11 -1.1 0.49 0.34 0.32 -0.49 -1.75 1.57 -0.39 -0.69 -0.25 -1.14 -0.79 -0.71
AMTR_s00174p00061480 (evm_27.TU.AmTr_v1.0_scaffold00174.29)
-1.86 -0.4 - -3.65 -0.38 -4.94 -0.6 -3.84 -1.61 -0.9 -0.1 -0.04 2.37 2.02 0.28 0.12 -0.62 -0.52 -0.73 0.01 0.56 -0.7
AMTR_s00180p00032180 (evm_27.TU.AmTr_v1.0_scaffold00180.17)
-3.26 -1.32 -0.33 2.09 -6.63 - -7.95 - - - 0.42 -1.1 3.62 0.63 -4.08 -1.14 -2.59 -4.47 - -6.55 - -8.05
AMTR_s00215p00026760 (evm_27.TU.AmTr_v1.0_scaffold00215.6)
-2.6 - - - 0.27 - - - - - -0.07 -0.15 2.5 -1.9 -2.58 -0.16 1.98 1.23 1.67 -0.87 0.81 -
AMTR_s00217p00029330 (evm_27.TU.AmTr_v1.0_scaffold00217.10)
0.82 -3.75 1.15 1.97 -0.99 -4.29 -2.16 -3.7 -1.21 -1.76 1.31 0.75 0.45 0.41 1.07 -0.68 0.58 -3.2 -3.22 -1.37 -3.58 -0.59
AMTR_s00361p00012090 (evm_27.TU.AmTr_v1.0_scaffold00361.1)
0.44 2.07 1.57 -6.49 -7.71 -4.36 - -9.06 -9.97 - 1.21 - 1.67 -7.42 - 1.84 0.5 0.12 - - - 0.85
AMTR_s00415p00000550 (evm_27.TU.AmTr_v1.0_scaffold00415.1)
0.71 0.62 1.4 1.97 -7.41 -6.06 - -7.04 -8.67 - 1.11 - 1.78 -8.58 -7.49 0.73 0.51 0.49 - -7.74 - 1.1
AMTR_s01529p00010210 (evm_27.TU.AmTr_v1.0_scaffold01529.1)
- - - - - - -2.39 - - - - - 3.63 3.15 - -0.96 - - - - - -
AMTR_s04671p00003500 (evm_27.TU.AmTr_v1.0_scaffold04671.1)
-1.17 1.84 1.56 0.73 -6.17 -3.38 - - - - 1.6 - 1.36 -7.27 -7.73 0.45 1.32 0.24 - - - 1.37
AMTR_s05043p00002670 (evm_27.TU.AmTr_v1.0_scaffold05043.1)
1.77 1.73 0.57 -3.94 -4.85 -6.28 -6.11 -4.86 -8.98 -10.39 -1.27 -3.15 2.56 1.4 0.78 1.15 -4.27 -1.21 -3.25 -5.1 -5.45 -7.94

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.