Heatmap: Cluster_237 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule
Ovary
Egg cell
Pollen tricellular
Pollen
Sperm
Flower (buds)
Flower
Panicle
Milk grains
Seeds
Seedling
Seedling (12-day-old, DongJin)
Seedling (12-day-old, DongJin, mutant)
Seedling (22-days-old, 22C)
Seedling (22-days-old, 30C)
Meristem
Stems
Callus
Leaf
Leaf (Azucena)
Leaf (Kinandang puti)
Leaf (Pandan wangi)
Leaf (Tadukan)
Leaf (chilling-treatment, 4C, 33h)
Leaf (drought-stress, 1 day)
Leaf (drought-stress, 3 days)
Leaf (drought-stress, 15 min)
Leaf (drought-stress, 45 min)
Leaf (drought-stress, 90 min)
Leaf (drought-stress, 90 min, recovery 15 min)
Leaf (drought-stress, 90 min, recovery 90 min)
Leaf (drought-stress, 90 min, recovery 210 min)
Leaf (heat-stress, 15 min)
Leaf (heat-stress, 150 min)
Leaf (heat-stress, 210 min)
Leaf (heat-stress, 120 min, recovery 15 min)
Leaf (heat-stress, 120 min, recovery 60 min)
Leaf (heat-stress, 120 min, recovery 120 min)
Leaf (dry season, irrigated field)
Leaf (dry season, rainfed field)
Leaf (wet season, irrigated field)
Leaf (wet season, rainfed field)
Root
Root (heading stage)
Root (tillering stage)
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
-0.98 - - - - 5.15 - - - - - - 1.88 2.87 - - 1.04 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
0.5 1.46 1.1 -0.09 -0.91 4.69 -1.11 0.3 0.46 -0.99 -0.71 -0.95 -1.5 -1.38 -0.55 - -1.79 -3.44 - -0.03 -1.87 -2.55 -1.87 -1.27 - -1.0 -0.58 -2.71 -1.77 - -2.99 0.29 -2.67 -2.19 - -0.39 -1.69 - -1.03 -2.13 -2.06 -3.61 -1.88 -0.95 -0.77 - - - -
-1.18 1.88 -1.3 - - 5.4 - - - - -2.7 - - 0.33 - - - - - - - - -0.44 - - - - - - - - - - - - - - - - - - - - - - - - - -
-2.43 -0.21 0.23 3.82 1.84 4.57 0.91 1.1 -4.97 - -5.68 - - - - - - -4.19 - -9.28 - -5.53 - - - - - - - - - - - - -0.46 - - - - - - - - -5.04 -2.41 - - -2.43 -
-3.8 -2.93 -2.99 -1.55 1.03 5.48 -3.49 -3.63 -5.91 -3.5 -2.93 -2.54 -3.32 -3.32 - - -4.06 -7.8 - -4.57 - - -9.25 -8.37 - - - - - - - -5.62 - - - - - - - -9.67 - - - -2.72 - -6.08 -2.59 -2.71 -2.38
-2.67 1.76 -0.21 -2.31 - 5.19 -5.11 - 0.35 - -5.65 - - - - - -2.92 -4.3 2.54 -7.88 - -3.39 - -4.79 - - - - - - - -1.41 - - - - - - - - - - - - - - - - -
-1.76 0.78 0.73 -1.62 2.43 5.24 - - -2.14 -3.84 0.05 -1.83 - - - - - -5.02 - -4.82 - - - - - - - - - - - -2.3 - - - - - - - - - - - -3.63 - - - - -
-1.83 0.98 -0.97 1.31 2.22 5.08 - -0.0 - - -1.8 - - 1.29 - - - -1.12 - -1.58 - - - - - - - - - - - - - - - - - - - - - - - -0.44 - - - - -
-5.23 -0.48 -2.05 -0.97 1.06 5.45 -3.05 -2.41 - -6.29 -3.68 - - -3.84 - - -6.19 -7.21 - -7.07 -5.6 - -5.45 -6.05 - - - - - - - -2.42 - -2.42 -2.5 -1.85 -2.91 - - -5.78 -5.29 -3.62 -4.44 -4.27 - - - -3.46 -
-3.67 -1.07 -1.2 1.45 -1.32 5.43 -4.21 -3.79 - -1.29 -0.92 - -3.57 -2.93 - - -3.38 -4.07 - -3.24 - - - - - - - - - - - - - - - - - - - - - - - -2.28 - - - - -
-0.39 1.28 -2.78 0.46 -0.26 4.73 -1.03 -2.33 -1.45 -6.04 -0.95 - -2.69 -1.26 - - -0.54 -2.06 2.27 -0.29 -6.2 -3.62 -2.93 -2.92 0.26 -1.89 -1.72 - -1.28 - -1.5 - - - - -1.6 -2.66 - - -4.09 -2.96 -4.02 -2.44 0.55 -3.01 -1.05 0.63 -0.41 -
-1.04 1.3 2.32 -1.52 -0.06 4.89 -0.05 -1.14 -3.22 -0.9 0.7 -0.99 -2.02 -2.39 - - -2.13 -3.12 -0.86 -2.59 -4.43 -3.83 -4.57 -4.15 0.33 -1.56 -0.27 -3.71 -3.14 -3.47 -3.63 -2.77 -3.66 - -3.38 - -3.59 -3.94 - -3.66 -4.5 -3.95 -2.65 -2.17 -4.33 -3.39 -2.53 -3.35 -4.1
-3.48 -0.93 -4.5 -0.15 -0.13 5.48 -3.52 -2.89 -5.82 - -5.87 -7.16 -5.13 -4.19 - - -2.41 -4.91 - -7.38 - -8.89 -8.03 -8.24 - - - -5.02 - - - -5.35 - - - - - - - -8.61 -7.85 - - -6.4 - -5.74 -0.64 -0.88 -3.09
1.04 0.68 0.84 2.67 0.45 4.09 0.66 0.86 -0.23 -2.39 -1.08 -2.23 -3.14 -2.51 -0.85 -0.81 0.64 -2.09 2.74 -2.36 - -5.46 -6.93 -6.79 - -3.93 -2.12 - - - - -4.49 - - - - - - - - - - - -3.56 -2.08 -2.47 -0.97 -0.25 0.39
1.23 0.55 1.39 1.29 -0.63 4.49 0.75 0.88 0.11 -2.02 -1.05 0.21 -3.4 -3.08 -1.77 -1.61 1.01 -1.96 0.47 -1.9 - -2.9 -8.08 -7.28 -3.8 -1.9 -0.82 - - - - -7.0 - - - -6.11 -6.17 - - -8.36 -7.54 -9.02 -7.8 -2.54 -0.52 -0.52 -0.22 -0.24 0.51
-3.29 -0.99 -2.33 2.84 0.67 4.23 1.07 1.62 -2.1 -5.42 -2.56 -1.12 -2.97 -2.55 - -3.9 -2.14 -5.11 -2.22 - -5.58 -7.71 -5.65 -6.03 - - - - - - -5.35 -5.99 - - - -5.06 - -5.3 - -8.8 -6.98 - -6.26 -1.17 0.43 2.26 2.55 0.2 -
-3.92 0.06 2.71 -0.72 -2.12 5.16 -3.03 -3.61 -4.21 -3.65 -2.48 - -1.03 -1.09 - - -2.81 -1.68 - -0.16 -5.19 - -2.42 - - - - - - - -1.49 - - - - - - -2.63 -2.58 -3.63 -3.73 - -2.51 -0.58 - - - - -
-2.89 1.5 -0.44 -0.1 2.29 5.3 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-2.64 2.86 - - 1.28 4.92 - -2.01 - - -0.83 - - - - - - -2.77 - - - - - -1.02 - - - - - - - 2.29 - - 1.28 - - - - - - - - -2.71 - - - - -
-1.14 -0.35 2.02 0.92 1.19 5.02 - 0.15 - - -1.98 -0.11 -0.73 - - - - - - - -2.99 -2.2 - -1.39 0.74 - - - - - - -2.38 - - - - - - - - - - -2.08 -1.93 -0.08 -1.88 - - -
-3.25 0.2 0.97 0.8 1.99 5.21 -0.56 -1.2 -4.43 - -8.97 - - - - - - -5.86 0.18 -5.29 - - - -4.9 - - - - - - - -3.0 - - - - - - - - - - - -3.12 -2.97 -1.88 - - -
-2.48 2.37 1.59 2.65 -0.03 4.95 -0.53 0.07 - - -2.73 - - - - - -1.56 - - - -3.93 - -3.87 - - - - - - - - - - - - - - - - - - - - - - - - - -
- 2.07 - -0.63 1.14 4.79 0.95 2.62 - - -5.87 - - 0.2 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.37 1.33 - - - -
-1.98 2.68 -1.72 2.2 2.52 4.36 0.82 -0.03 -0.48 - -4.59 - - 1.0 - - -2.84 -3.37 - -2.65 -3.14 - - - - - - -0.17 - -0.16 - 0.27 - - - - - - 0.12 -3.11 -2.33 -2.62 -1.09 -2.67 - - - - -
-3.37 -1.75 1.43 0.83 -1.26 4.8 -1.52 -1.01 -2.69 -3.27 -1.32 -4.23 -5.53 -2.78 - -2.52 -4.36 -4.27 0.17 -5.42 -8.26 - - - -2.4 - - - - - - - - - - - - - - - -8.38 - -7.08 -3.0 -4.93 -4.52 1.5 2.52 1.94
-2.17 0.36 -0.03 -1.55 -0.47 5.26 -0.02 -0.57 -0.6 -3.76 -2.91 - -0.71 -0.77 - - 0.96 -1.85 - -2.43 - - - - - - - - - - - - - - - - - - - - - - - -0.74 - - - -1.79 -
-1.6 2.9 - - - 4.97 -1.47 - - - -1.41 0.18 - - - - -1.7 - - - - - - - - - - - - - - - - - - - - - - - -1.49 - - 2.01 - 1.71 - - -
1.26 2.39 -2.03 0.02 - 4.52 - - -0.73 - -0.31 - - 2.93 - 2.4 - - - - -2.4 - - - - - - - - - - 0.89 - - - - - - - - -2.7 - -1.49 -1.45 - - - - -
-3.3 2.92 - -4.09 0.98 4.76 - - 0.02 - -4.87 -3.35 1.17 2.03 - - -5.17 0.26 - - -4.8 -5.54 -5.5 -3.39 0.49 - - - - - - -2.08 - - - -1.77 -1.83 - - - - -3.5 -3.49 -0.27 -2.37 - - - -
-6.91 -0.92 -0.41 -0.37 -0.39 5.39 -1.47 -0.53 - - -9.27 - - - - - -7.42 -9.8 1.43 -8.21 -7.58 -7.74 -5.95 -5.33 - -4.29 - - - - - -2.92 - - - - - - - - - -4.99 -6.67 -7.25 -2.63 -3.84 -3.47 - -
-3.0 0.29 0.02 -0.6 -0.46 5.0 -2.03 -1.8 -1.05 -3.92 -1.24 -0.26 -1.2 -2.1 -1.39 -3.93 -1.24 -1.26 0.54 -2.16 -2.86 -2.09 -2.28 -2.01 -2.88 -4.23 -5.28 - -2.44 -3.06 -1.78 -0.85 -2.66 - -4.01 -5.14 - -2.31 - -1.9 -1.82 -0.69 -1.06 -2.05 0.84 -0.51 -4.3 - -3.16
0.19 2.9 -1.68 0.01 -0.38 4.16 -1.77 -1.33 -1.37 -2.37 -1.26 -0.81 -0.75 1.41 -1.66 -0.62 -0.88 0.06 0.07 -1.95 -5.84 -2.25 -3.37 -2.71 0.5 -0.52 -0.63 - - - - -2.05 -2.73 - - - - - -2.96 -6.18 -4.17 - - -0.81 1.4 1.28 -1.36 -1.03 -0.59
0.01 2.74 -0.71 1.6 -0.21 4.96 -1.88 -3.74 -0.61 -1.66 0.58 - - -0.19 - - -1.94 -2.38 - -3.74 -2.71 - -4.22 -3.75 - - - - - - - -1.44 -0.48 - - - - - - - - - - -4.44 - - - - -
-3.65 3.07 -1.25 - - 5.15 - - - - -0.99 - - - - - - -2.4 - - - - -2.58 - - - - - - - - - - - - - - - - - - - - - - - - - 1.87
-0.47 2.1 0.0 -0.92 - 4.72 0.21 -0.02 0.37 - -2.56 - - - - - -3.45 - 2.82 - -3.35 - -2.62 - - - - - - - - 1.37 0.01 - - - - - - - -1.98 -1.39 - - - - -0.14 - -
-1.8 3.0 - 2.24 0.93 4.76 -1.93 -0.99 -2.2 - -1.22 - - 1.1 - - - -5.8 - -4.66 -3.16 - - - - - - - - -0.31 - -0.74 - - - - - - - -3.58 -3.5 - - -1.08 - - 0.23 - -
-0.51 1.95 -2.86 - 3.61 4.28 1.91 1.38 -2.78 -3.8 -0.42 - - - - - -1.51 -0.66 - -0.28 - - -3.68 - - - - - - - -0.24 - - - - - - - - - - - - -0.31 0.21 -0.45 - - -
0.46 2.17 -2.07 2.23 3.6 3.58 1.69 0.8 - - -3.5 - -0.06 0.87 - - 0.37 -4.85 - -1.85 - - -2.34 - - - - - - - - - - - - - - - - - - - - -0.6 - - 0.65 - 1.13
0.49 1.78 -2.48 - 1.07 5.18 -1.09 -3.96 - -1.62 -3.45 - - - - - -3.21 -3.65 - -0.57 -4.2 -4.45 - -3.21 0.44 - - - - - - -2.66 - - - - - - - -4.47 - - - 0.07 - -1.82 - -0.38 -
-1.12 1.22 1.7 0.89 1.1 4.56 2.17 1.71 0.56 - -0.26 -0.69 - - - - -1.99 -1.86 - -2.81 -2.61 -2.96 - -2.47 - - - - - 0.09 - -1.07 - - - - - - - - -3.89 -2.72 -2.68 -1.31 -0.79 - - -0.64 -
-5.7 -1.17 1.44 2.66 0.5 5.09 -1.12 -0.43 -5.26 -2.06 -3.44 - - - - - -6.88 - - - - - - - - - - - - - - - - - - - - - - - - - - -7.74 - - -0.25 0.34 -1.84
-1.15 1.22 -4.08 2.02 2.42 4.51 -0.46 0.94 1.6 -1.96 -1.29 0.4 - -1.21 - - - -6.62 2.02 -2.17 - - - -3.05 - - - - - - - -1.74 - - - - - - - -4.21 -3.7 - - -3.1 -1.47 - -0.94 - -
-0.98 2.73 -3.1 -2.5 0.44 5.01 - -4.37 0.57 -2.12 -4.18 - - 0.18 - - - -4.81 - - - - - - - -1.25 - - - - - -3.07 - - - - - - - - - - - -4.98 1.71 0.12 - - -
1.26 0.99 0.24 -0.04 -1.06 4.8 -0.5 -0.15 -1.5 -1.69 -1.84 -2.01 -0.76 -1.15 -2.03 -2.02 1.48 -1.42 -2.34 -1.19 -3.14 -3.72 -3.19 -4.09 -1.97 -1.78 -5.34 -2.41 -3.24 -3.52 -3.63 -2.46 -2.69 -3.78 -1.79 -4.19 -5.27 -2.24 -2.02 -2.98 -2.08 -2.08 -1.29 -0.82 -0.48 -1.57 -2.74 -2.17 -1.67
-1.16 1.01 - -1.85 0.49 5.05 -2.46 -2.04 -1.7 -2.07 -2.39 - 1.38 -1.19 - - -0.31 1.15 - 0.56 -3.59 - - -4.05 - -1.11 - - - - - -0.74 - - - - - - - -4.57 - -1.61 - 0.43 - - - - -
-1.13 2.46 -3.54 0.52 2.56 4.89 -3.43 -0.21 0.02 - -1.39 - - 0.5 - - - -2.09 - -1.62 - - - -3.44 - - - - - - - -2.13 - - - - - - - -4.1 -3.36 -1.8 -2.92 -1.82 -0.84 - - - -
-1.59 0.71 -0.87 -0.1 1.49 5.05 -5.19 -2.6 -1.27 - -1.26 - - -1.98 - - -2.23 -3.67 - -4.44 -3.29 -2.66 -1.39 - - -1.06 - -0.74 - -1.72 - -1.24 - - -0.89 0.35 0.39 -2.2 -0.44 -2.82 -3.6 -1.25 -2.51 -3.08 -2.58 - -1.08 - -
- 2.19 - - 0.65 5.42 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-2.04 0.21 0.49 0.46 -0.46 4.84 -1.29 -1.62 -2.22 -1.83 -1.65 2.43 -0.21 -1.99 0.23 - -3.94 -1.27 - -1.22 -3.27 0.23 -5.5 -1.99 -0.63 -0.44 -0.48 - - - - -1.83 - - - - - - -1.39 -5.67 -3.39 -2.66 -2.94 -0.79 - - - - -
-4.4 -0.44 -0.45 -3.22 0.81 5.46 -4.56 - -4.02 - - -4.84 - - - - -7.03 - - - -6.58 -6.8 - -3.38 - -4.5 - - - - - -1.74 - - - - -4.1 - - -6.23 - -6.39 -6.64 -8.12 -0.43 -3.7 - - -
-1.06 2.3 1.01 1.72 - 4.59 -0.2 -0.57 0.9 -1.23 1.11 -2.54 -0.84 -0.88 0.02 - 0.57 -0.57 - -0.3 -3.99 - -3.84 - - - - - - - - - - - - - -1.18 - - -3.69 -1.93 -1.84 - 0.29 - - - - -0.91
- 2.3 - -0.68 3.48 4.81 -2.04 -0.44 - -0.53 -2.14 - - 0.15 - - -1.73 -4.91 - -4.12 - - - - - - - - - - - -2.34 - - - - - - - - - -2.69 - -1.2 - - - - -
0.03 2.05 -2.11 -0.86 2.23 3.91 -4.44 -4.45 -1.66 -2.59 -2.63 - - 1.81 - - -5.54 -3.84 - -1.99 0.26 -4.09 0.44 -2.07 0.18 - - -1.06 0.5 0.31 -0.49 1.05 1.98 -0.54 -0.71 -1.22 - 0.17 -0.96 -1.19 -2.22 -0.83 -1.8 -3.97 - -9.63 - - -
- 1.88 - 3.17 3.2 4.27 0.91 - - - -3.14 - - - - - 0.41 - - - - - - - - - - - - - - - - - - - 1.95 - - - - -0.5 - - - - - - -
-0.48 -1.01 -0.07 1.2 1.21 4.13 0.62 0.54 -2.37 0.32 -0.68 -0.3 0.15 0.18 -2.26 -0.97 -1.1 -0.82 -0.78 0.03 -4.62 -3.06 -3.92 -2.82 -3.54 -0.32 -0.07 -4.8 -3.59 -3.71 -5.01 -4.17 -3.93 -3.88 -3.45 -4.11 -4.33 -3.88 -3.48 -4.62 -3.63 -4.46 -3.91 0.09 -0.16 -0.47 0.22 0.8 2.13
-0.24 2.14 -2.76 -0.82 1.6 4.94 - - -0.22 2.13 1.34 - - -0.58 - - -2.59 -5.54 - - - - - -4.37 - - - - - - - -3.07 - - - - - - - -4.89 - - - -5.06 -1.45 - - - -
-3.09 0.64 -4.34 -2.96 -1.64 4.46 -3.35 -2.63 -0.52 -3.7 -3.35 0.26 1.21 1.89 - - -6.88 -1.47 -0.6 -2.1 -2.88 -7.23 -1.88 -5.09 -2.26 - - - - - -3.37 -2.78 - -3.04 - - - -3.68 - - - -6.09 - -1.88 2.85 2.7 -3.55 -2.84 -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.