Heatmap: Cluster_22 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule
Ovary
Egg cell
Pollen tricellular
Pollen
Sperm
Flower (buds)
Flower
Panicle
Milk grains
Seeds
Seedling
Seedling (12-day-old, DongJin)
Seedling (12-day-old, DongJin, mutant)
Seedling (22-days-old, 22C)
Seedling (22-days-old, 30C)
Meristem
Stems
Callus
Leaf
Leaf (Azucena)
Leaf (Kinandang puti)
Leaf (Pandan wangi)
Leaf (Tadukan)
Leaf (chilling-treatment, 4C, 33h)
Leaf (drought-stress, 1 day)
Leaf (drought-stress, 3 days)
Leaf (drought-stress, 15 min)
Leaf (drought-stress, 45 min)
Leaf (drought-stress, 90 min)
Leaf (drought-stress, 90 min, recovery 15 min)
Leaf (drought-stress, 90 min, recovery 90 min)
Leaf (drought-stress, 90 min, recovery 210 min)
Leaf (heat-stress, 15 min)
Leaf (heat-stress, 150 min)
Leaf (heat-stress, 210 min)
Leaf (heat-stress, 120 min, recovery 15 min)
Leaf (heat-stress, 120 min, recovery 60 min)
Leaf (heat-stress, 120 min, recovery 120 min)
Leaf (dry season, irrigated field)
Leaf (dry season, rainfed field)
Leaf (wet season, irrigated field)
Leaf (wet season, rainfed field)
Root
Root (heading stage)
Root (tillering stage)
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
-0.14 1.84 3.05 1.46 -0.56 - 2.82 2.37 -3.77 0.14 -0.31 - 1.04 0.99 - - 3.05 0.22 -0.12 -2.05 - - - - - - - - - - - - - - - - - - - - - - - 0.06 - - -0.26 -0.03 0.16
0.33 2.43 3.49 -3.99 -1.53 0.99 -0.43 -0.19 1.38 -2.64 -0.76 0.69 1.32 0.28 -3.32 - 1.52 1.58 0.95 -0.95 -2.25 -2.98 -1.71 -0.9 -0.19 -2.52 -2.17 -1.55 -3.38 -0.78 -2.22 -0.79 -1.87 -1.36 -1.4 -2.37 -1.8 -1.57 -2.26 -2.8 -2.68 -2.21 -1.77 -0.2 -3.33 -1.65 -2.66 -0.8 -0.16
0.63 1.07 2.43 0.39 0.7 -0.04 -0.23 -0.18 -0.35 -0.42 0.18 1.24 1.1 1.09 0.96 1.15 0.79 0.55 0.12 0.55 -4.71 -4.02 -4.89 -3.79 -0.96 0.95 1.56 -5.31 -5.63 -4.45 -5.43 -4.54 -5.01 - -5.13 -5.34 -4.82 -4.08 -4.06 -5.0 -4.62 -4.46 -4.24 -1.06 0.71 0.96 0.5 0.65 0.91
0.36 3.0 3.8 - -0.4 - - - 1.4 0.97 1.37 - - 1.39 - - - 0.18 - 2.85 -1.53 -1.47 - -0.32 - - - - - - - - - - - - - - - - - - - - - - - - 2.4
0.36 -0.02 2.79 1.23 1.47 -2.57 -1.23 -0.93 1.83 -1.74 -0.06 0.78 0.4 0.51 -3.46 - 0.99 1.1 0.27 -6.4 -0.65 -1.1 -1.49 -1.65 -2.34 - - 0.09 -1.44 -1.37 -0.66 -0.72 -0.8 -3.06 -2.25 -1.01 -1.13 -0.93 -2.44 -2.18 -1.18 -0.7 -0.6 -3.13 -1.19 0.81 0.95 1.67 0.92
0.09 1.09 3.89 0.59 -0.01 3.15 -0.84 -0.4 2.18 -4.4 1.06 0.16 -2.1 -1.04 - 1.2 -2.04 -0.98 0.91 -0.33 - - - - - -0.58 -0.55 - - - - - - - - - - - - - - - - -0.09 0.29 -0.89 - - -
0.52 0.02 3.67 1.63 -1.25 -1.22 1.25 1.64 -0.45 -1.58 -1.05 - 3.34 2.53 - - 0.63 0.52 - 0.07 - -10.41 - - 0.82 -6.98 - - - - - -8.53 - - - - - - - - - - - -0.16 - -3.8 - -4.24 -3.49
2.77 3.74 3.73 - - 1.61 - - 3.34 - - - - - - - - - - - - - - - - - - - - - - 0.51 - - - - - - - -0.66 -1.49 - - - - - - - -
0.4 0.12 3.53 -1.32 -0.6 2.24 -0.44 -0.44 0.56 -1.09 0.39 1.47 -2.12 -0.88 1.5 1.52 -0.4 0.92 3.2 -2.12 -3.57 -7.01 -5.42 -5.9 - -1.65 -0.01 - - -3.4 - - -3.6 - -3.57 -3.67 - - - -5.12 -5.86 -5.36 - -1.34 -1.42 -1.3 -2.94 -4.28 -
-1.08 0.55 4.21 0.65 2.48 2.22 -0.3 0.52 - 0.17 0.98 1.06 -1.08 -1.46 - - -1.13 -3.81 - 0.62 - - - -3.47 - - - - - - - - - - - - - - - - - - - 0.39 - - 0.63 1.45 -0.47
2.19 2.18 2.74 2.49 1.52 - 1.31 2.25 - - -0.78 - 0.83 1.89 - - -0.63 0.82 - -0.47 - - - - - - - - - - - - - - - - - 0.93 - - - - - 2.23 - - - - 0.77
-0.39 4.14 2.94 - - 4.11 - - 2.5 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
0.86 1.39 2.96 -0.39 -0.85 -0.41 0.37 0.4 -1.89 0.36 0.52 -6.94 0.81 1.15 -2.97 -3.18 0.47 0.18 -4.07 0.29 -0.7 -2.59 -1.76 -2.67 1.24 -0.04 0.31 -0.5 -0.3 -0.08 -0.58 -0.41 -1.02 -1.06 -0.88 -0.17 -0.81 -1.13 -1.34 -0.99 -0.98 -0.65 -0.92 -0.86 -1.11 -0.52 -0.25 0.88 0.04
0.25 1.92 3.41 0.72 0.81 -3.01 1.13 0.82 0.07 -0.31 0.76 -0.16 0.46 0.68 0.13 -0.13 2.4 1.75 -3.01 -0.25 - - - - - 0.78 1.16 - - - - - - - - - - - - - - - - -0.35 -0.33 0.41 - - -
0.93 0.58 3.71 -6.69 -4.95 -4.24 0.75 0.81 -0.36 0.61 0.83 -5.17 1.75 1.27 -1.58 -3.14 1.26 1.03 - 0.83 -2.48 -4.94 -4.93 -4.53 -0.32 -0.54 -0.91 -1.95 - -2.57 -3.59 -3.23 -3.17 -1.52 -1.28 -0.86 -0.89 -1.96 -3.1 -3.2 -2.36 -3.16 -2.62 1.19 -1.18 -1.4 0.43 -1.52 0.8
-7.19 -2.58 2.88 - - - -2.34 -1.68 -1.05 -6.88 -0.1 - 1.86 2.8 - - -0.78 -0.64 - -0.4 -3.53 - -3.54 - -2.73 - - - -3.85 -4.18 -3.19 -5.34 -3.38 -3.9 -4.35 -3.41 - -3.65 -3.0 -0.16 -0.48 -0.13 0.27 -0.55 - -4.06 2.73 2.99 2.78
0.27 1.35 2.62 1.17 -0.72 -2.06 1.94 1.76 -2.32 1.62 1.6 -6.56 0.46 0.94 - - 2.06 -1.81 - -3.84 -3.77 -10.95 -4.21 - -4.2 - - -4.55 -3.77 -6.99 -5.42 -4.09 -4.44 -5.45 -3.44 -2.88 -3.17 -3.69 -3.63 -4.81 -4.37 -4.28 -4.07 -5.44 - -7.61 1.31 2.0 2.8
0.97 1.45 3.25 1.21 -0.45 0.08 1.14 0.93 -1.93 -0.43 0.69 -3.49 0.27 0.36 - - 3.21 -1.13 - -6.5 -5.26 - -4.45 -9.87 -3.86 - - -4.94 -6.91 -4.29 -5.06 -5.04 - -7.44 -5.58 -4.17 -5.25 -6.08 -4.64 -6.51 -7.68 -6.05 -5.82 -6.79 - - 1.15 1.99 2.31
-0.16 0.87 2.55 0.29 -1.34 0.7 2.07 1.8 -0.85 0.36 0.5 -0.44 1.46 0.98 - - 1.77 -1.52 - -2.42 -1.8 -7.45 -0.93 -7.32 -4.26 -7.85 - -1.43 -2.46 -2.48 -2.43 -1.24 -1.84 -1.95 -2.02 -1.09 -2.19 -1.2 -1.84 -2.45 -2.68 -1.64 -2.11 -2.48 - -6.08 1.15 1.86 2.46
1.19 1.53 3.64 -3.65 -5.6 0.01 2.58 2.4 -2.2 0.97 1.37 -1.33 0.93 0.94 - - 2.0 -1.96 - -2.87 -2.28 -8.5 -1.7 -6.58 -4.18 - - -1.86 -2.44 -2.68 -2.46 -1.79 -2.23 -3.11 -2.88 -2.66 -2.5 -2.68 -2.65 -2.79 -3.21 -1.84 -2.17 -2.8 - -4.68 -1.13 -0.77 -0.16
1.38 1.22 3.06 2.36 -0.85 2.82 -0.17 -0.54 -3.6 -0.85 0.54 -5.45 0.19 0.12 - -1.97 1.41 0.38 2.06 0.08 -2.76 -7.59 -3.05 -3.46 -1.41 0.59 1.3 - -2.71 -4.71 -3.97 -2.85 -4.65 - -4.53 -3.12 -3.78 -4.17 -3.29 -4.01 -3.59 -3.02 -3.33 -1.15 -1.38 -2.42 -2.24 -1.97 -2.38
0.37 2.03 3.63 -1.18 -1.26 -0.06 -0.29 -0.4 -2.58 -2.6 0.94 - -1.97 -2.54 0.57 0.01 0.75 -0.57 - -1.19 -0.32 -5.3 -0.74 - -1.97 0.08 0.65 -1.16 -1.87 -2.04 -1.72 -0.85 -0.22 - 0.95 1.0 -0.8 0.91 0.3 -1.83 -0.97 -0.95 -0.53 0.01 -0.31 -1.63 -2.36 -0.29 -2.97
-0.89 0.66 3.63 -6.98 -5.54 -0.48 0.47 0.67 -0.16 -0.63 0.24 -0.54 0.2 0.19 -0.02 0.34 0.45 -0.45 - 0.8 -0.6 -2.65 -0.87 -3.23 -2.44 -1.63 -1.34 -0.03 -0.3 0.11 -0.1 0.11 -0.84 -2.63 -0.54 -2.06 -0.36 -0.87 -1.01 -1.07 -0.79 -1.08 -0.75 1.18 -1.26 -1.77 -0.3 0.51 -0.09
-0.77 0.92 2.12 -2.0 -4.98 -0.83 1.5 1.07 -0.96 0.44 0.61 -3.2 0.29 0.32 - - 1.63 0.1 - 0.02 -7.4 -2.21 -4.36 -10.31 -1.75 -0.81 -0.53 - - - - -9.49 - - -7.5 - - - - - -5.02 - -9.31 0.02 - -4.31 2.39 2.86 3.29
-0.3 2.21 1.59 -0.88 -3.29 1.58 2.51 1.82 -1.43 -1.81 -1.62 -2.14 1.69 2.59 - - -1.15 1.67 - -1.46 -3.35 -2.73 -2.19 -2.49 -0.37 - -1.72 - -1.57 - -1.12 -2.47 -0.03 - - - -2.44 -2.04 - -4.23 -3.0 -5.34 -3.17 -0.62 0.22 0.93 2.14 -1.56 -1.37
0.05 0.45 2.14 -2.0 -2.25 1.08 0.11 -0.04 0.99 -1.15 -0.38 -0.06 0.82 0.42 -0.98 -0.92 0.95 0.39 0.05 -0.11 -0.12 -0.9 -0.41 -0.95 -1.46 -0.86 -0.61 -0.36 -0.39 -0.62 -0.57 -0.15 -0.06 -1.35 -0.3 -0.48 -0.43 0.05 -0.3 -0.46 0.11 -0.01 0.59 0.15 -0.65 -0.7 0.03 0.48 0.53
- 5.24 3.47 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
0.33 0.93 2.01 -0.66 0.95 1.51 -2.13 -1.75 0.93 -3.37 -0.6 0.15 -0.51 -0.11 0.98 1.28 -2.09 -1.91 0.37 0.45 -0.08 -0.21 -0.08 -0.35 -0.74 0.76 0.8 -0.25 -0.61 0.08 -1.42 -0.14 -0.59 -1.19 0.53 0.35 0.12 0.11 -0.77 -1.65 -0.84 -1.19 -0.74 0.06 -0.89 -1.05 -1.78 -1.03 -2.66
1.68 1.67 3.64 -1.08 0.76 - 0.23 -0.9 1.04 -2.08 -0.26 -1.49 -1.62 -1.64 - - -1.03 -0.51 - 1.71 -0.56 -1.84 -0.33 -1.42 1.61 -0.72 -2.58 0.08 0.36 -0.76 -0.87 -0.67 -0.66 -2.02 -0.67 -1.41 0.18 -2.66 -2.61 -1.8 -1.87 -1.35 -1.64 -0.62 -2.68 -3.06 -2.54 0.41 -0.82
-0.3 2.23 5.13 1.97 0.13 - - - - - 0.86 - - - - - - 0.73 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
1.56 0.56 3.86 -2.36 -0.88 -0.06 -1.22 -0.45 -0.31 -1.0 -0.82 -0.0 -0.34 -0.41 -0.55 -1.05 -0.43 -0.71 -2.17 -0.55 -0.64 -0.97 -0.69 -1.33 -0.45 0.07 0.19 -0.58 -1.24 -0.82 -0.68 -0.29 -0.63 -1.83 -0.73 -0.24 -1.03 -0.92 -0.21 -0.89 0.43 -0.4 0.64 -0.98 -0.92 -0.75 -2.11 -1.19 -1.34
1.64 1.1 2.39 0.62 -0.34 -2.45 0.19 -0.79 -0.16 -1.06 0.21 -3.59 1.2 1.23 1.17 -0.82 1.99 0.34 0.87 1.48 -7.15 - - -5.13 -0.18 1.88 1.97 - - - - -4.9 - - - - - - - -6.45 -6.36 -4.6 - -0.7 -0.26 -1.43 0.09 -0.88 1.18
-1.09 -0.78 4.87 -2.68 1.8 0.83 -0.08 -0.25 -1.86 -2.89 0.79 -0.69 -3.68 -3.01 -3.04 -1.8 -2.58 -2.11 - -1.2 -4.25 -4.37 -3.49 -3.77 -2.56 -2.55 -3.36 -3.0 -2.63 -2.39 -2.23 -3.67 -5.53 -5.25 - -3.79 -3.76 -3.67 -5.25 -4.91 -4.96 -3.65 -3.41 1.11 0.6 -0.52 -1.55 -1.9 -2.0
1.31 1.56 3.63 -1.64 -3.44 0.12 1.12 0.46 -0.18 0.47 1.06 -1.67 0.8 0.73 -1.2 -1.13 3.03 1.6 - -0.17 - - - - - -0.41 0.26 - - - - - - - - - - - - - - - - 0.0 -0.37 0.45 - - -
1.39 3.2 2.99 - - - -3.11 -1.62 3.09 -2.72 -0.11 -1.0 -2.32 0.53 -0.35 - 0.32 0.42 - -3.46 -3.13 -3.73 -3.53 -1.58 - - - -1.47 0.3 - - -0.14 -1.23 - -1.14 - - 0.05 - -2.17 -1.63 -2.91 -2.66 -1.56 1.66 1.59 -0.12 -1.96 -
2.7 2.03 4.48 - -5.97 0.27 -0.45 -1.4 1.37 - 0.88 0.19 -2.88 -1.3 - - 1.55 1.95 - - -4.33 -4.83 -6.36 -3.88 -2.08 - - - - -3.38 -2.64 -5.28 -3.32 - -3.29 - - - - - - - - - - - - - -
3.11 0.34 4.86 -7.13 -5.43 -2.97 -1.35 -1.66 -1.83 -2.11 0.28 -0.39 1.05 0.35 - - 0.06 -1.51 - -3.17 -2.73 - -3.44 -8.04 - - - -3.29 -3.46 -4.63 -3.2 -2.02 -4.05 -5.23 -2.96 -2.45 -2.73 -3.24 -3.93 -6.66 -6.54 -6.19 -5.79 -3.64 - - - -3.72 -6.15
-5.72 1.27 5.2 -6.93 -3.35 0.38 -3.41 - - -29.12 -3.79 -4.76 -20.93 1.72 - - -2.92 1.49 - -2.87 - - - - 0.17 - - - - - - -3.77 - -6.57 - - - - - - -10.43 -7.54 - -2.88 - -1.49 -2.73 - -
1.22 1.09 2.89 -7.86 -6.0 - 0.69 0.83 1.13 -0.7 0.15 0.34 1.2 0.78 -0.48 -1.14 1.08 0.95 -0.66 1.08 -1.95 -2.95 -1.79 -3.39 -1.29 0.33 0.66 -1.77 -2.66 -2.23 -1.6 -2.0 -2.37 -4.58 -1.03 -1.4 -2.5 -1.42 -1.56 -3.15 -1.82 -2.44 -1.72 0.87 0.64 0.72 0.2 0.14 0.21
-4.39 -2.47 3.88 - - - - -5.48 -1.88 - -1.26 -3.89 3.04 2.92 - - - -4.05 - -5.17 -1.59 -2.17 -2.54 -1.73 -1.0 - - 0.14 -2.33 -2.29 -2.55 - -2.23 -1.76 0.47 -0.69 -1.26 -0.09 -0.87 -0.72 -0.28 -0.14 -0.05 - - -1.53 1.22 0.54 1.23
-0.13 0.82 3.44 0.78 -2.66 -0.6 1.64 1.43 -6.38 -0.51 1.44 - 0.92 1.43 - - 0.95 0.23 - 0.39 -8.63 - - - -0.38 - -3.72 - - - - - - - - - - - - - - - - 1.56 - -2.62 0.45 1.14 2.84
-2.68 1.14 4.01 -0.66 - 0.32 -0.81 -1.47 -1.71 -0.1 1.65 - 0.64 4.08 - - -0.42 0.7 - -2.15 - - -3.29 - - - - - - - - - - - - - - - - - - - - -1.94 -1.86 -0.88 - -0.99 -0.82
0.99 0.77 5.0 -2.58 - -3.23 -0.13 0.06 -0.57 -3.4 0.15 - -0.17 -0.08 - - 1.49 -0.25 - -1.31 - - - - 0.24 - - - - - - -6.67 - - - - - - - - - - - -2.55 - - -1.6 0.01 -0.98
3.03 4.8 3.56 - - - - - - - 0.41 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
1.19 2.48 3.2 -0.11 - -2.23 0.64 0.07 - -0.52 -0.31 -3.22 0.18 -0.08 - - 0.79 0.29 1.23 -0.6 -2.45 -2.53 -2.58 -3.52 -0.43 -0.84 -0.19 - -1.04 - - - - - -1.54 -1.64 - - - -2.83 -2.68 -2.18 -3.2 1.62 1.7 2.04 0.83 -0.14 -0.2
1.48 1.53 4.65 1.84 1.14 1.62 0.15 -1.94 -0.82 0.96 1.52 - -2.04 - - - 0.48 -4.43 - - - - - - - - - - - - - - - - - - - - - -3.26 - - - -2.63 -0.68 - - - -
- 5.3 3.28 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-0.37 -0.1 4.01 -2.21 0.37 -0.6 0.18 0.18 1.39 -1.74 -0.62 1.15 -0.24 -0.45 0.21 0.24 -0.05 0.77 -1.13 0.44 -1.43 -1.42 -0.97 -1.58 -0.74 0.07 0.5 -2.55 -1.58 -1.46 -2.65 -1.16 -1.67 -3.34 -2.04 -1.35 -2.23 -0.92 -1.92 -2.48 -2.09 -2.4 -2.17 -1.02 0.13 0.06 -1.59 -1.68 -1.97
0.94 0.15 2.23 -4.21 -2.94 -3.02 1.16 0.77 0.75 0.19 0.35 0.26 0.06 0.16 1.97 1.96 1.41 0.17 1.93 0.44 -2.36 -1.91 -2.45 -2.26 -1.34 -0.1 0.35 -3.13 -3.39 -2.78 -2.77 -1.82 -2.73 -4.33 -2.46 -2.28 -2.4 -2.01 -2.11 -2.7 -2.11 -2.53 -2.21 1.11 -0.07 -0.63 -1.14 0.35 0.08
0.2 -0.57 3.17 - - -2.05 -0.58 0.17 1.24 -1.14 -0.39 0.59 1.28 0.02 0.45 -0.57 -2.59 0.6 - 1.1 -0.81 -1.69 -0.88 -1.22 -0.52 1.78 2.2 -1.48 0.06 -1.47 -1.98 -0.58 - -1.3 -1.38 1.09 -0.8 -0.35 -1.19 -4.1 -0.98 -2.23 -2.8 0.56 - -1.16 - -2.2 -0.52
0.69 3.93 4.06 1.72 - -0.75 0.47 1.18 -2.12 - 0.05 - -0.68 -1.06 - - 2.14 -1.7 - - -5.2 - - - - - - - - - - -1.85 - - - - - - - - - - - -4.43 - - - -2.01 -1.91
0.41 0.4 2.26 -3.15 -2.27 1.16 -1.33 -1.03 -1.57 -2.14 -0.66 1.19 -0.32 -0.69 -3.66 -0.68 -0.92 -0.54 -0.97 0.43 0.36 -2.53 0.45 0.14 -0.59 -0.58 -0.82 0.33 0.12 0.78 0.54 1.19 0.22 0.27 -0.03 0.21 0.22 0.21 -0.2 -0.83 -0.36 -0.45 0.13 -0.68 0.66 0.98 -2.76 -1.64 -1.69
0.57 1.61 2.86 3.02 3.0 2.32 0.9 -0.11 0.14 0.24 0.34 - -2.07 -1.1 - - 0.31 -0.68 - -6.71 - -4.22 - - 0.54 - - - - - - -2.66 - - - - - - - - - - - -2.09 - - 0.44 1.08 0.86
1.05 0.7 3.36 2.21 0.68 -1.65 1.61 1.6 0.26 -1.65 -1.23 -5.61 -0.57 -0.15 - - 3.3 1.33 - 0.1 - - - - - - - - - - - - - - - - - - - - - - - 1.32 0.22 0.83 - - -
-0.6 -0.01 2.71 -8.26 -6.83 -5.34 1.46 1.08 -1.2 -0.79 0.97 -7.48 1.28 1.5 - - 2.34 0.49 2.29 0.44 - - - - -0.64 -2.0 -0.8 - - - - - - - - - - - - -9.0 -6.97 -7.27 -8.55 1.1 - -4.23 1.32 1.31 2.66
-0.47 0.26 3.09 -3.13 -3.57 1.74 0.53 -0.71 -3.49 -0.47 1.03 - 1.63 1.24 - - 2.5 0.37 - -0.08 - - - - - - - - - - - - - - - - - - - - - -7.42 - -0.07 -1.2 0.42 1.34 1.95 2.93
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2.53 4.03 - - - 4.05 - - - - -2.0 - - - - - - - - - - - - 2.17 - - - - - - - 2.47 - - - - - - - - - - - - - - - - -
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Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.