Heatmap: Cluster_180 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00001p00270080 (evm_27.TU.AmTr_v1.0_scaffold00001.454)
- - - - -1.66 - -2.71 - -0.93 -2.25 0.35 - -0.31 0.1 0.43 1.53 2.42 0.9 - 0.71 1.75 0.24
AMTR_s00003p00268030 (evm_27.TU.AmTr_v1.0_scaffold00003.396)
- - - - 0.55 - -3.85 - -2.03 -3.38 0.82 0.98 0.8 -0.11 -1.53 0.42 1.29 0.79 0.72 -0.76 2.22 -0.04
AMTR_s00005p00261300 (evm_27.TU.AmTr_v1.0_scaffold00005.199)
- - - - -1.88 - -1.03 - -0.08 0.4 0.24 - 1.87 0.32 -0.05 0.51 1.62 - 0.9 1.04 0.72 0.87
AMTR_s00007p00029260 (evm_27.TU.AmTr_v1.0_scaffold00007.9)
2.52 - - - -1.21 - - - -4.91 -5.49 -0.21 1.57 -1.91 -4.64 -0.96 -0.99 2.54 0.7 -0.35 -0.68 0.55 -1.76
AMTR_s00007p00032030 (evm_27.TU.AmTr_v1.0_scaffold00007.11)
- - - - 0.26 - -1.91 - -2.53 -2.77 0.92 - 1.29 1.03 2.05 - 0.7 2.49 - 0.38 - 0.17
AMTR_s00007p00268160 (evm_27.TU.AmTr_v1.0_scaffold00007.388)
- - - - 0.4 - 0.77 - 0.42 1.31 0.57 - 1.27 -0.33 0.59 - 0.22 - - 1.63 2.01 -0.53
AMTR_s00008p00247580 (evm_27.TU.AmTr_v1.0_scaffold00008.182)
1.15 1.02 - - -0.02 - -1.37 - 0.62 0.17 -1.75 0.43 0.69 0.89 -0.06 -0.33 1.03 0.04 -1.01 -0.93 0.66 0.24
AMTR_s00009p00186090 (evm_27.TU.AmTr_v1.0_scaffold00009.116)
- - - - 0.91 - - - -4.22 - 0.4 - 0.08 -1.72 -0.61 0.08 2.63 - 0.38 1.1 2.29 0.2
AMTR_s00011p00169480 (evm_27.TU.AmTr_v1.0_scaffold00011.49)
- - - - 1.39 - - - -3.12 -1.9 - 0.67 0.35 0.53 -0.67 - 1.81 1.48 -0.5 2.14 1.32 -2.95
AMTR_s00013p00254830 (evm_27.TU.AmTr_v1.0_scaffold00013.242)
- - - - 3.02 - - - - - - - 2.06 -0.0 0.63 - 2.85 - - - - -
AMTR_s00015p00162720 (evm_27.TU.AmTr_v1.0_scaffold00015.32)
- - - - - - - - -3.05 - - - 1.3 -1.08 0.74 - 3.29 - 0.7 1.53 - 1.57
AMTR_s00015p00236110 (evm_27.TU.AmTr_v1.0_scaffold00015.89)
- - - - 1.58 - -1.63 - -2.07 -1.31 - - 0.81 -1.21 -1.91 - 2.78 - - 0.03 2.83 -0.67
AMTR_s00016p00259970 (evm_27.TU.AmTr_v1.0_scaffold00016.372)
- - - - -0.58 - -0.49 - -0.34 -0.22 0.61 -1.46 1.62 -0.17 0.93 -1.02 1.63 -1.65 -2.63 1.28 1.52 0.86
AMTR_s00017p00177170 (evm_27.TU.AmTr_v1.0_scaffold00017.90)
- - - -2.63 0.22 - -0.32 -1.41 -0.94 -0.58 0.87 -0.06 0.95 0.01 0.27 -0.9 1.64 0.12 0.39 1.5 0.37 0.26
AMTR_s00018p00049780 (evm_27.TU.AmTr_v1.0_scaffold00018.14)
- - - - 2.07 - -2.2 - 0.12 -0.65 1.05 - 1.89 -0.35 0.69 - 0.22 - - 1.12 0.86 1.34
- - - -0.23 -1.95 - - 1.21 - -1.22 - - -1.75 -2.5 - - 3.19 - 0.81 0.15 2.09 0.52
AMTR_s00018p00195490 (evm_27.TU.AmTr_v1.0_scaffold00018.115)
- - - - - - -2.55 - -1.17 -0.18 0.73 - -1.05 0.06 -0.89 - 2.08 - - 1.71 3.13 -0.89
AMTR_s00024p00021400 (evm_27.TU.AmTr_v1.0_scaffold00024.6)
-3.02 -1.93 -1.07 -1.22 0.03 -1.34 -2.03 - -1.13 -1.5 -0.38 - 0.5 0.83 0.66 0.95 1.59 0.79 -0.58 1.51 0.63 -0.06
AMTR_s00025p00213610 (evm_27.TU.AmTr_v1.0_scaffold00025.286)
- - 1.02 -4.43 1.41 - -1.8 - -2.37 -1.97 0.34 0.83 1.04 0.54 0.16 -2.05 1.05 1.13 0.07 0.36 -0.25 0.25
AMTR_s00025p00239770 (evm_27.TU.AmTr_v1.0_scaffold00025.364)
-0.37 - - -9.19 0.38 - -1.9 -8.48 -2.16 -1.74 1.55 0.08 -1.65 -0.92 -0.19 -0.98 2.53 0.18 -0.18 1.27 -0.81 1.09
AMTR_s00025p00240180 (evm_27.TU.AmTr_v1.0_scaffold00025.365)
1.29 -7.39 -7.37 -3.42 1.23 - -4.37 -7.97 -4.6 -4.43 1.44 -0.85 0.18 -0.21 -0.53 -1.4 2.45 -0.76 -0.69 0.0 -1.45 1.37
AMTR_s00029p00115280 (evm_27.TU.AmTr_v1.0_scaffold00029.126)
- - - - 1.59 - - - - - - - - - - - 3.03 - - 1.61 - 2.95
AMTR_s00030p00202810 (evm_27.TU.AmTr_v1.0_scaffold00030.142)
-1.21 -1.18 -0.07 -6.41 0.54 - -1.67 - -0.51 -1.22 0.17 0.79 0.47 0.12 0.68 0.22 1.12 1.08 0.2 0.19 0.12 0.6
AMTR_s00032p00220860 (evm_27.TU.AmTr_v1.0_scaffold00032.227)
- - - - -0.3 - - - - - - - -0.78 -0.38 0.45 - 3.74 - - 1.46 - 1.26
AMTR_s00032p00234530 (evm_27.TU.AmTr_v1.0_scaffold00032.264)
-0.91 0.15 -1.94 -4.75 -0.55 - -1.41 -4.72 -1.34 -1.5 0.24 0.39 -0.2 0.18 0.78 -0.17 -1.59 0.2 1.4 0.13 2.37 -0.45
AMTR_s00033p00030080 (evm_27.TU.AmTr_v1.0_scaffold00033.13)
- 0.81 - -1.82 1.03 - -0.06 - 0.37 -0.08 0.32 - 1.31 1.09 -0.08 - 0.69 - -1.26 0.45 1.33 1.0
AMTR_s00033p00111080 (evm_27.TU.AmTr_v1.0_scaffold00033.51)
-5.06 -3.36 - -1.38 -3.37 - -2.77 - -2.02 -2.42 0.18 -0.09 1.04 0.64 -0.26 -3.09 2.69 0.72 0.55 1.49 -0.36 0.03
AMTR_s00033p00228320 (evm_27.TU.AmTr_v1.0_scaffold00033.218)
-2.48 -0.49 -4.41 -1.22 -0.01 -3.35 -0.22 -6.21 -0.07 -0.3 -0.15 -0.12 0.81 0.23 0.15 -0.8 1.83 0.29 0.36 1.41 -0.65 0.14
AMTR_s00034p00134810 (evm_27.TU.AmTr_v1.0_scaffold00034.38)
- - - -3.22 -5.58 - - - -4.8 -5.23 1.12 1.4 -0.69 -0.68 0.28 -2.75 2.76 1.63 -0.01 0.48 0.28 -0.17
AMTR_s00037p00149540 (evm_27.TU.AmTr_v1.0_scaffold00037.67)
- - - - -1.5 - -0.55 - -0.57 0.03 0.38 0.49 1.52 0.15 -1.46 - 1.21 0.71 -0.74 1.17 1.88 0.82
AMTR_s00037p00193330 (evm_27.TU.AmTr_v1.0_scaffold00037.98)
- - - - 0.53 - - - - - - - -1.14 -2.48 -0.87 2.98 3.52 - - - - -
AMTR_s00046p00085850 (evm_27.TU.AmTr_v1.0_scaffold00046.41)
- - - - 0.32 - - - -1.27 - 1.09 - 0.87 0.35 1.19 - 1.87 - - 1.63 1.5 1.71
AMTR_s00046p00132620 (evm_27.TU.AmTr_v1.0_scaffold00046.64)
1.94 - - - -1.55 - -2.7 - -1.66 -1.74 1.21 1.62 -1.46 -4.35 -5.84 -0.53 2.8 0.84 - -3.46 -0.31 -0.18
AMTR_s00048p00203160 (evm_27.TU.AmTr_v1.0_scaffold00048.170)
- - - - -1.78 - - - -1.51 -2.36 1.6 - -0.69 - -0.25 - 2.89 - - -0.29 2.99 -1.13
AMTR_s00049p00208030 (evm_27.TU.AmTr_v1.0_scaffold00049.227)
- - - -0.51 -3.29 - - - -1.33 -2.15 0.71 - 0.78 -0.56 -0.06 - 1.49 1.28 - 1.21 2.12 1.88
AMTR_s00055p00048340 (evm_27.TU.AmTr_v1.0_scaffold00055.15)
- -1.0 -0.03 -1.58 -0.71 - -4.39 - -3.56 -4.4 0.28 1.24 0.86 0.07 0.32 0.61 1.19 0.9 0.38 0.2 0.8 0.89
AMTR_s00055p00212900 (evm_27.TU.AmTr_v1.0_scaffold00055.155)
- - - - 1.27 - -2.49 -1.49 -1.4 -3.38 -0.56 2.18 -0.47 -0.6 0.17 - 2.01 - 1.54 0.84 0.83 -1.53
AMTR_s00056p00134140 (evm_27.TU.AmTr_v1.0_scaffold00056.105)
- - - - 0.56 - 0.1 - -2.97 -2.53 1.46 1.63 -0.74 -1.99 -2.2 - 3.06 - 0.46 -0.35 - 0.78
AMTR_s00058p00151070 (evm_27.TU.AmTr_v1.0_scaffold00058.119)
- - - - -3.84 - -1.6 - -0.46 0.04 1.3 -0.49 1.52 0.41 0.09 0.53 1.49 - -1.84 1.95 0.16 0.92
AMTR_s00063p00082020 (evm_27.TU.AmTr_v1.0_scaffold00063.8)
- - - -4.83 1.43 - -3.56 - -1.59 -1.59 -1.17 - 1.08 1.32 1.27 - 1.7 -0.6 - 1.96 - 1.71
AMTR_s00066p00136500 (evm_27.TU.AmTr_v1.0_scaffold00066.133)
- - - - -0.27 - - - -2.92 -3.85 0.46 -0.06 0.6 0.25 0.28 -2.62 2.87 0.33 -0.07 1.57 0.18 -0.12
AMTR_s00068p00194800 (evm_27.TU.AmTr_v1.0_scaffold00068.158)
-0.94 -0.28 -2.35 -1.45 0.84 - -7.16 -9.4 -2.23 -2.83 -0.38 -1.36 1.19 1.8 0.9 -0.4 1.79 -1.59 0.34 0.65 -1.78 0.57
AMTR_s00071p00124830 (evm_27.TU.AmTr_v1.0_scaffold00071.101)
- - - - 1.56 - 0.25 - 0.0 1.26 - - 0.95 1.25 - - 2.03 - - 0.81 - 2.11
AMTR_s00071p00165090 (evm_27.TU.AmTr_v1.0_scaffold00071.163)
- - - - - - - - - -1.04 - - - - - - 3.54 - 1.04 1.0 - 2.54
AMTR_s00089p00156830 (evm_27.TU.AmTr_v1.0_scaffold00089.93)
- - - - -0.18 - - - - - - - 2.15 -1.59 0.6 - 2.93 - - 2.07 - 1.6
AMTR_s00093p00105300 (evm_27.TU.AmTr_v1.0_scaffold00093.33)
- - - - -1.19 - -4.76 - -2.01 -4.71 0.27 -0.28 0.89 0.03 0.27 1.16 2.34 0.53 -1.63 1.6 0.37 0.81
AMTR_s00099p00157520 (evm_27.TU.AmTr_v1.0_scaffold00099.154)
- 0.76 -4.91 -5.8 -0.05 -3.94 -2.79 - -2.56 -2.3 0.16 1.11 -0.31 -1.55 0.75 -0.04 2.19 0.82 0.32 0.67 0.18 0.42
AMTR_s00102p00065130 (evm_27.TU.AmTr_v1.0_scaffold00102.30)
- - - - 0.41 - 0.53 - 0.71 0.94 0.58 - 1.29 0.01 0.51 -1.47 0.39 -0.1 -1.08 0.67 1.33 1.08
AMTR_s00104p00118200 (evm_27.TU.AmTr_v1.0_scaffold00104.48)
- - - 1.07 0.66 - -4.01 - -1.17 -2.02 0.3 1.79 -0.04 -0.35 0.8 - 2.27 - -1.38 -1.08 1.81 -2.46
AMTR_s00111p00111780 (evm_27.TU.AmTr_v1.0_scaffold00111.86)
-0.71 - - -0.15 0.41 - - - -2.74 - - - 1.25 0.74 1.69 - 1.97 1.83 - 1.33 - 0.79
AMTR_s00117p00128260 (evm_27.TU.AmTr_v1.0_scaffold00117.58)
- - - - -0.25 - -2.34 - -1.79 -1.5 -0.58 - 2.09 0.67 -0.85 0.64 2.22 - 0.04 1.73 - 1.42
AMTR_s00131p00078100 (evm_27.TU.AmTr_v1.0_scaffold00131.48)
- - - - -2.11 - -4.1 - -3.86 -3.36 1.14 - 1.57 0.45 -3.46 - 3.08 - - 1.98 - 1.34
AMTR_s00131p00115950 (evm_27.TU.AmTr_v1.0_scaffold00131.89)
- - - - - - -1.84 - -0.61 -1.13 - - -0.19 0.32 -0.2 - 1.67 - - 0.63 3.31 1.58
AMTR_s00133p00053750 (evm_27.TU.AmTr_v1.0_scaffold00133.17)
- - - - -0.04 - - - - -3.65 0.27 1.1 -0.17 -0.65 -0.28 - 2.47 1.91 - 1.66 0.75 0.17
AMTR_s00138p00031220 (evm_27.TU.AmTr_v1.0_scaffold00138.11)
- - - -0.78 -1.73 - -0.52 - -1.39 -1.53 -1.04 -0.26 1.29 -0.82 1.71 -2.4 2.08 - -5.18 2.34 -4.19 1.32
AMTR_s00139p00059000 (evm_27.TU.AmTr_v1.0_scaffold00139.9)
- 0.48 - 1.87 -0.99 - -5.24 -1.48 -2.13 -5.01 -1.01 0.76 -0.44 0.32 -0.56 -1.39 1.59 -1.01 0.29 1.18 1.41 -0.14
AMTR_s00151p00093180 (evm_27.TU.AmTr_v1.0_scaffold00151.28)
- - - - -3.89 - -3.32 - -1.16 -1.66 -0.1 - 1.41 0.59 0.58 -1.14 2.79 -0.76 -0.74 1.74 0.08 0.62
AMTR_s00151p00093280 (evm_27.TU.AmTr_v1.0_scaffold00151.29)
- - - - - - -3.29 - -1.47 -2.05 -1.95 -0.17 1.18 0.22 0.71 -0.73 2.56 1.23 - 2.07 - 1.03
AMTR_s00179p00037990 (evm_27.TU.AmTr_v1.0_scaffold00179.8)
- - - - -1.31 - - - - - 1.78 - - - -1.14 - 3.12 - - - 3.17 -
AMTR_s00190p00029110 (evm_27.TU.AmTr_v1.0_scaffold00190.10)
- - - - -1.7 - - - -3.67 -4.97 -0.19 0.62 0.66 -1.13 0.32 -0.95 3.07 - -1.74 1.73 1.27 -0.11
AMTR_s02825p00003100 (evm_27.TU.AmTr_v1.0_scaffold02825.1)
-1.47 - - -5.89 -4.0 - - - -7.57 - 0.3 2.02 1.86 -0.63 -0.92 -3.43 1.94 -0.85 -0.15 1.76 -3.39 1.38
AMTR_s03448p00006040 (evm_27.TU.AmTr_v1.0_scaffold03448.1)
- - - - 2.51 - - - -2.82 - 1.85 - -0.89 -2.2 -2.29 - 2.67 - 0.78 1.4 - -0.17
AMTR_s03991p00001150 (evm_27.TU.AmTr_v1.0_scaffold03991.1)
- - - -0.99 2.1 - -2.96 - -2.23 -1.22 0.88 - 0.79 0.15 1.64 - 0.58 -16.52 - 1.61 0.72 1.29
AMTR_s04335p00004830 (evm_27.TU.AmTr_v1.0_scaffold04335.1)
- - - - 1.97 - -4.16 - -3.23 -2.01 0.66 0.83 1.24 -1.19 0.61 - 1.62 2.23 - -1.65 - 0.93
AMTR_s05645p00002770 (evm_27.TU.AmTr_v1.0_scaffold05645.1)
1.06 0.36 0.44 -0.83 -1.5 - - -6.18 - - 0.89 -0.88 0.51 -2.0 -1.48 - 2.58 -1.07 -1.13 0.14 - 1.97

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.