Heatmap: Cluster_31 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule
Ovary
Egg cell
Pollen tricellular
Pollen
Sperm
Flower (buds)
Flower
Panicle
Milk grains
Seeds
Seedling
Seedling (12-day-old, DongJin)
Seedling (12-day-old, DongJin, mutant)
Seedling (22-days-old, 22C)
Seedling (22-days-old, 30C)
Meristem
Stems
Callus
Leaf
Leaf (Azucena)
Leaf (Kinandang puti)
Leaf (Pandan wangi)
Leaf (Tadukan)
Leaf (chilling-treatment, 4C, 33h)
Leaf (drought-stress, 1 day)
Leaf (drought-stress, 3 days)
Leaf (drought-stress, 15 min)
Leaf (drought-stress, 45 min)
Leaf (drought-stress, 90 min)
Leaf (drought-stress, 90 min, recovery 15 min)
Leaf (drought-stress, 90 min, recovery 90 min)
Leaf (drought-stress, 90 min, recovery 210 min)
Leaf (heat-stress, 15 min)
Leaf (heat-stress, 150 min)
Leaf (heat-stress, 210 min)
Leaf (heat-stress, 120 min, recovery 15 min)
Leaf (heat-stress, 120 min, recovery 60 min)
Leaf (heat-stress, 120 min, recovery 120 min)
Leaf (dry season, irrigated field)
Leaf (dry season, rainfed field)
Leaf (wet season, irrigated field)
Leaf (wet season, rainfed field)
Root
Root (heading stage)
Root (tillering stage)
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
-19.52 1.52 - - - - - -2.94 - - -4.15 - - 5.5 - - -3.68 - - - - - - - - - - - - - - -1.1 - - - - - - - - - - - - - - - - -
-4.6 0.63 -5.38 -5.85 -2.13 -2.26 -7.02 -7.01 -3.32 -3.35 -4.94 -5.25 - 5.48 - - - -6.28 -0.95 -3.5 -5.54 -7.29 -4.88 -3.35 - -2.71 -2.96 - - - - -1.18 - - - -3.83 -2.68 -4.03 - -5.93 -4.58 -6.73 -5.3 -4.36 -4.1 -2.48 - - -
-2.1 0.97 -2.65 -3.08 -1.43 -3.13 -4.15 -2.15 0.13 -4.55 -5.15 -3.11 -3.27 5.4 - - -3.41 -4.37 - -5.36 -4.13 -4.75 -3.97 -3.0 - -1.87 -3.82 - - - - -2.73 -1.75 - - -2.49 - -2.14 - -5.35 -5.05 -4.93 -4.77 -3.31 -4.28 - -5.88 -3.02 -
-4.12 0.54 - -0.54 -1.77 - -2.38 - - - - 0.23 - 5.41 - - - -2.65 - - - - - -2.99 - - - - - - - -1.08 - - - - - - - - - -1.79 - - 0.53 - - - -
-3.7 1.0 -3.74 - - -1.83 - -4.26 - -2.15 -4.77 - - 5.5 - - -1.38 -3.5 - - -5.0 -4.83 - -4.11 - - - - - - - -3.33 - - - - - - - -20.25 - - - - - - - - -1.23
- 1.64 - - - - - - - - - - - 5.52 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-3.31 1.35 -4.94 - - -1.27 - - - - -4.68 -4.91 - 5.48 - - - - - -8.86 - -5.45 - -2.71 - -29.01 - - - -2.16 - -2.39 - - - - - - - -5.11 -4.45 - -4.81 - - - -1.13 - -
- 1.6 - - - 0.46 - - -3.5 - -6.42 - - 5.47 - - - - - - -5.78 - - -5.05 - - - - - - - -2.27 - - - - - - - - - - - - - - - - -
-5.18 2.05 - - - -1.03 - - - - - - - 5.43 - - - - - - - - - - - - - - - - - 0.25 - - - - - - - - - - - - - - - - -
-3.63 2.08 -5.44 -4.04 -1.0 -2.64 -2.05 -2.11 - -2.44 -3.47 - -3.35 5.4 - - -2.2 -0.98 - -5.6 - -5.84 - - - - - - - - - -3.51 - - - - - - - - - - -9.12 -3.16 - - - - -
-0.59 0.35 -3.62 -1.67 0.11 -0.39 -2.7 -2.11 -1.25 -1.5 -1.77 -1.07 -1.13 5.05 -4.96 -3.35 -2.87 -1.75 -0.37 0.52 -5.99 -4.19 -5.9 -3.18 -4.78 1.18 0.68 -5.63 - -4.14 -5.44 -2.94 -5.18 -6.2 -6.33 -4.18 -6.57 -5.38 -4.62 -5.23 -5.16 -4.69 -3.96 -0.28 -0.97 -1.53 -4.3 -5.64 -3.62
-2.23 0.73 -3.49 -1.1 -1.91 0.34 -2.51 -1.39 -0.35 -1.43 -1.69 -2.07 -0.93 5.15 -2.9 -4.64 -2.63 -1.87 -0.56 -0.45 -3.35 -3.74 -4.1 -2.98 -3.43 0.05 -0.71 -2.55 -3.77 -3.29 -5.36 -1.73 -2.91 -3.83 -3.14 -2.32 -3.53 -2.66 -3.95 -4.34 -4.37 -3.74 -3.98 -1.53 -1.71 -1.62 -6.04 - -
-1.55 1.52 - - 0.9 - - - -2.09 - -4.68 - - 5.41 - - - - - -3.17 - -3.59 - - - -0.27 - - - - - -2.1 - - - - - - - - - - - - - - - - -
-1.07 0.1 -1.96 -1.05 0.96 1.18 -1.91 -1.46 -0.49 -0.82 -0.8 -0.53 -1.13 4.96 -2.63 -4.27 -1.85 -1.31 -0.46 -0.08 -5.0 -3.6 -5.23 -3.87 -4.32 0.38 0.23 -6.24 -5.42 -3.74 -4.46 -3.14 -6.18 -6.22 -4.49 -3.69 - -6.46 -6.82 -4.84 -4.37 -3.68 -3.22 -0.42 -1.16 -1.3 -5.12 -4.33 -3.27
0.32 1.31 -3.31 -4.13 -1.39 0.13 -5.81 -5.81 -2.31 - -4.67 - - 5.4 - - - -7.01 - -9.59 -4.83 -6.38 -5.14 -4.35 - -2.69 - - - - - -2.69 - - - - - -0.49 - - -5.83 - - - - - - - -
-2.69 1.32 - -0.19 -1.92 - -0.07 -0.6 - - -5.53 - - 5.45 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-3.32 0.76 - -4.2 - - - -4.36 - -1.57 -3.57 -4.3 -3.15 5.5 - - - -6.46 - -4.76 -5.2 -5.6 - - - - - - - - - -1.98 - - -0.94 -2.18 - - - -3.84 -4.65 -4.58 -4.85 - - - - - -
- -0.33 - - - -4.58 - - - - -8.71 - - 5.59 - - - - - - - - - - - - - - - - - -24.31 - - - - - - - - - - - -6.21 - -3.07 - - -
- 0.81 - - - -1.44 - - - - -7.15 - - 5.51 - - - -13.44 - - -7.2 - - -6.08 -0.06 - - - - - - - - - - - - - - - - - - -6.07 -2.44 - - - -
- 0.23 - - - - - - - - - - - 5.58 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-3.9 0.73 -4.91 -1.9 -2.97 -3.31 -3.0 -2.46 -3.55 -3.43 -3.85 -3.41 - 5.47 - - -4.62 -5.53 - -7.35 -4.71 -5.91 -6.24 -5.15 - - -3.36 - - - - -1.59 - - - -3.27 -2.33 -2.29 -1.5 -5.05 -5.52 -3.15 - -5.82 - -4.31 - - -
-2.39 1.25 - 1.48 0.59 0.13 -2.46 -1.89 - - -5.15 - - 5.34 - - - -6.32 - - -6.01 -5.56 - -6.05 - - - - - - - -3.97 - - - - - - - - - -4.8 - - - - - - -
-2.85 -0.66 -6.5 -5.22 - - -6.2 - -1.37 - -3.29 -1.97 -0.66 5.46 -1.43 - -0.75 -3.62 - -5.93 - - -5.79 -7.31 - -2.76 -3.12 - - - - - - - - - - - - - - -5.67 - - -1.84 -3.81 -8.93 -1.94 -0.17
-4.28 0.14 - - - - - - -3.93 - -8.5 - - 5.55 - - -5.8 - - - -5.55 - - - - -1.43 - - -1.07 - - - - - - - - - - - - - - - - - - -2.87 -
-1.89 -0.11 - - -6.96 -2.84 -0.05 -2.44 - - -2.57 -23.94 - 5.46 - - -4.46 -3.09 - -4.13 - - -6.16 - - -14.09 -1.66 - - - - -3.09 - - - - - - - - - - - -0.23 -2.99 -1.75 -2.26 -11.57 -2.34
- 2.2 -4.38 - - - - - -1.36 - -8.02 - - 5.42 - - -8.46 - - -2.38 - - - -2.81 - -0.21 - - - - - - - - - - - - - - - - - -5.72 - - - - -
-7.94 -0.96 -7.37 -13.23 -0.82 -2.86 -2.68 -15.58 - - -7.25 -23.93 -11.8 5.57 - - - -6.51 - -27.04 - - - -5.1 - - - - - - - - - - - - - - - - - - - -4.66 - -21.92 - - -
-2.74 0.03 -3.99 -1.91 - -2.28 - - - - -4.35 - - 5.56 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -2.24 - - -
- 1.27 - - - - - - - - -7.51 -4.19 - 5.5 - - - - - -3.88 -2.84 - -3.19 - - - - - - -1.81 - - - - - - - -1.53 - -3.07 -4.84 - -3.15 -3.06 - - - - -
- 0.4 - - - - - - -2.49 - -4.89 - - 5.56 - - - - - - - - -6.07 - - - -1.33 - - - - - - - - - - - - -5.19 - - - - - - -6.56 - -
-3.6 1.3 - - -4.33 -0.91 -2.42 -1.03 -0.64 -0.09 -1.65 -3.92 0.14 5.22 - - -3.07 -1.36 - -3.11 -3.73 -3.96 -5.15 -2.45 - - - -0.48 -1.72 - -2.57 -0.97 -0.47 - - - - - -1.48 -4.38 -2.78 -3.74 -3.5 -3.31 -1.73 -1.52 - - -
-1.66 1.24 -4.57 -2.87 -5.35 -1.3 -5.3 -3.17 -2.91 -4.92 -4.09 -4.68 - 5.45 - - -3.69 -7.63 - -4.44 -5.09 -3.72 -4.11 -4.25 -1.79 -1.79 - - - - - -1.94 - - -1.87 - - - - -6.32 -5.43 - - - - - -3.37 - -3.47
- 1.77 - - - -9.32 - -1.49 - - -9.18 - -3.41 5.49 - - - -23.15 - - - - - - - - - - - - - -4.92 - - - - - - - - - - - -16.1 - -3.6 - - -
-4.99 1.3 - - - - -2.75 -3.74 -0.42 - -3.25 - -2.86 5.49 - - -3.96 - - - - - - -3.76 - - - - - - - -2.45 - - - - - - - - - - - - - - - - -
-5.72 1.72 - - - -2.81 - -3.92 - - - - - 5.5 - - - -5.19 - - - - - - - - - - - - - -2.57 - - - - - - - - -5.36 - - - - - - - -
-2.45 0.86 - -5.03 -2.63 -1.48 -3.91 - - -2.64 -4.41 - -2.52 5.5 - - - -4.65 - -6.72 -5.4 - -3.04 -6.38 - - -4.07 - - - - -3.43 - - - -2.79 - -1.83 - - -8.91 -5.67 -6.59 -6.56 - - - - -
-0.45 1.22 -3.49 -3.0 -2.17 -1.22 -1.69 -3.46 -1.37 -1.68 -2.62 - - 5.3 - -1.3 -1.7 -5.29 0.4 -6.21 -4.67 -5.0 -3.84 -1.5 - -2.64 - -2.22 - - - -2.26 - -1.04 - - -2.33 - - -5.12 -4.78 -3.05 -2.27 - - - -2.56 - -
-7.18 0.47 -4.93 -4.33 - -0.07 -2.71 -5.4 - -3.89 -6.9 - -3.87 5.51 - - -6.03 - - -5.69 -4.72 -7.36 -5.61 -4.43 - - - - - -3.32 - -2.18 - - -3.49 -3.48 - - - - - - - -6.28 - -4.2 - - -
- 1.48 - - - - - - -2.84 - -6.81 -3.11 - 5.5 - - - - - - - - -5.08 -2.75 - - - - - - - -1.29 - - - - - - - - - - - - - -2.63 - - -
- 1.6 - - - - -2.54 - - - -2.83 - - 5.45 - - - - - -2.82 - - - - - - - - - - - - 0.72 - - - - - - - - - - -1.76 - - - - -
- 0.78 -25.02 - - - - - - - -5.8 - - 5.56 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-3.0 1.56 - 0.63 1.65 - -0.95 0.98 -1.32 - -4.75 - - 5.25 - - - - - - - - - - - - - - - - - -2.64 - - - - - - - - - - - - - - - - -
- -0.91 -4.92 -5.73 -4.16 - - - - - -1.78 - - 5.51 - - - - - -0.99 -6.55 - - -5.59 - -0.99 0.64 - - - - - - - - - - - - - - - - - - - - - -
- -0.82 - - - - - - - - - - - 5.6 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- 1.03 - - - - - - - - -6.52 - - 5.5 - - - - - - -1.19 - - - - - - - - - -1.74 - - - - -0.49 - - - - -1.99 -3.82 - - - - - - -
-1.28 -0.22 -3.32 -0.57 1.08 -0.19 -1.42 -1.01 -0.62 -0.43 -0.53 -1.56 -0.84 4.99 -1.8 -1.99 -2.7 -1.54 -2.5 -0.14 -4.15 -3.63 -4.79 -3.14 -3.06 0.86 0.57 -4.21 -4.21 -3.76 -5.08 -2.85 -3.4 -6.01 -3.17 -3.49 -3.4 -3.85 -3.84 -4.9 -4.78 -4.03 -4.29 -1.3 -0.94 -1.46 -6.09 -6.48 -4.5
-3.42 1.02 -0.94 -0.67 0.84 -1.43 - -5.6 -4.14 - -2.21 -1.87 - 5.32 - - - - - -5.28 - -2.76 -3.36 -2.08 -0.15 -1.6 -2.61 - - - - -1.4 - -1.86 - - - - - -4.23 -3.87 -2.61 -4.1 -3.62 - - - - -
-1.58 0.91 - - -0.56 - -3.46 -4.46 - - - - - 5.51 - - -4.6 - - - - - - - - - - -1.24 - - - - - - - - - - - - - - - - - - - - -
-1.5 0.84 -2.69 -1.33 -1.8 -0.07 -2.23 -2.2 -2.08 -5.37 -4.91 -4.35 -1.31 5.24 - -3.21 -5.71 -2.77 - -2.64 -2.31 -3.46 -2.36 -1.75 - -2.42 -2.94 -1.65 - -2.65 -4.11 -0.48 -1.13 -3.12 -2.05 -2.24 -2.01 -1.86 -3.2 -3.32 -2.2 -2.73 -1.6 -3.0 -1.28 -2.55 -2.83 -3.45 -4.78
- 1.22 -4.37 - - - - - - - -9.28 -3.83 - 5.44 - - -6.73 -23.84 0.71 -8.81 -5.29 -4.76 -6.11 -3.39 - -2.81 - - - - - - - - - - -2.08 -1.96 - -4.41 -3.97 -1.46 -5.11 - - -5.25 - - -
-5.38 1.81 - - - -0.03 - - -2.37 - - - - 5.46 - - - - - - - -3.83 - -3.64 - - - - - - - -2.33 - - - - - - - - - - - - - - - - -
-3.78 0.75 -2.96 -2.14 - -0.93 -3.23 -2.81 - -5.05 -2.88 - -2.6 5.45 - - -5.07 -4.47 - -5.57 - - - - 0.59 - - - - - - - - - - - - - - - - - - -3.3 -1.85 - - - -
- -2.72 - -2.71 - - - -3.72 - - -8.96 - 1.07 5.53 - - - -1.21 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-2.72 0.61 - - - - -2.27 - -1.92 - -5.47 -3.54 - 5.47 - - - -7.73 0.92 - -5.39 -4.79 -5.48 -5.53 - - - - - - - - - - - - - - -2.11 - -5.67 - - -6.22 - - - - -
-5.85 0.3 - -4.61 - -2.22 - - - - -8.9 - -3.16 5.52 - - - - - -4.14 - - - -4.23 -0.2 -4.04 - - - - - -1.93 - - - - - - - -5.86 -5.22 - - - - -2.6 - - -
- 0.97 - - - - - -0.75 - - - - - 5.52 - - - -5.13 - -4.55 - - - - - - - - - - - - - - - - - - - - - - - -1.14 - - - - -
- 0.84 -3.43 - - -2.03 - - -2.22 -3.9 -5.95 -3.27 - 5.49 - -0.81 -4.31 -8.02 - -9.37 -5.6 -5.08 -4.22 -2.8 - - - -2.69 - - - -1.05 - - - - - - - - - -4.97 -4.77 -5.11 - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.