Heatmap: Cluster_147 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule
Ovary
Egg cell
Pollen tricellular
Pollen
Sperm
Flower (buds)
Flower
Panicle
Milk grains
Seeds
Seedling
Seedling (12-day-old, DongJin)
Seedling (12-day-old, DongJin, mutant)
Seedling (22-days-old, 22C)
Seedling (22-days-old, 30C)
Meristem
Stems
Callus
Leaf
Leaf (Azucena)
Leaf (Kinandang puti)
Leaf (Pandan wangi)
Leaf (Tadukan)
Leaf (chilling-treatment, 4C, 33h)
Leaf (drought-stress, 1 day)
Leaf (drought-stress, 3 days)
Leaf (drought-stress, 15 min)
Leaf (drought-stress, 45 min)
Leaf (drought-stress, 90 min)
Leaf (drought-stress, 90 min, recovery 15 min)
Leaf (drought-stress, 90 min, recovery 90 min)
Leaf (drought-stress, 90 min, recovery 210 min)
Leaf (heat-stress, 15 min)
Leaf (heat-stress, 150 min)
Leaf (heat-stress, 210 min)
Leaf (heat-stress, 120 min, recovery 15 min)
Leaf (heat-stress, 120 min, recovery 60 min)
Leaf (heat-stress, 120 min, recovery 120 min)
Leaf (dry season, irrigated field)
Leaf (dry season, rainfed field)
Leaf (wet season, irrigated field)
Leaf (wet season, rainfed field)
Root
Root (heading stage)
Root (tillering stage)
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
0.94 -1.15 -1.85 -1.81 -3.76 -1.41 0.31 0.83 -0.84 -1.25 0.12 0.07 -0.37 -0.13 0.28 0.08 -1.02 -0.66 2.18 0.39 -0.3 -0.11 -0.75 0.16 -0.17 0.41 0.16 0.06 -0.39 -0.01 0.19 0.12 -0.98 -0.8 -0.48 0.18 -0.55 -0.41 0.2 -0.76 -0.21 0.19 0.71 0.9 0.76 0.7 -0.42 -0.63 -1.24
0.32 1.98 1.04 2.02 -0.88 3.2 0.25 -0.37 0.17 -3.62 1.24 - 0.97 0.57 - - 0.01 1.48 3.69 -0.14 -4.33 - -2.02 - - - - - - - - - - - - - - - - - -2.69 - - -1.79 - - - - -0.55
1.28 3.11 -0.42 -1.29 - 3.14 1.37 2.32 - 0.56 1.41 - 1.16 0.07 - - 0.86 -1.1 - -2.07 -2.54 - - - 2.27 - - - - - - -0.83 - - - - - - - -2.46 - -1.47 - -0.42 1.83 - - - -
- 4.57 - - - - - - 3.44 - 3.75 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -0.19 - - - - -
0.43 2.82 2.5 1.77 -1.41 3.31 0.13 0.42 -1.18 2.05 2.81 -4.05 -3.31 -3.08 - -2.29 -2.66 -2.62 - -2.49 -4.6 -2.95 - -5.65 -2.14 -2.54 -2.56 -3.43 - - - -2.95 - - - - - - - -4.97 -2.95 -6.25 -3.75 -1.92 -2.7 -1.29 1.98 -1.81 -
1.08 3.82 0.21 -2.4 - 0.48 0.27 0.38 - 2.47 3.06 -3.38 0.4 0.98 - - 1.22 -2.01 - -1.92 -4.4 - -2.64 - - - - - - - -0.51 - - - - -1.26 - - - -4.51 - - - 2.2 - - - - 0.55
-0.96 1.44 -0.75 -5.29 -2.17 -0.94 0.37 -0.15 0.25 -1.8 2.54 -4.15 1.81 2.74 - - -0.45 2.58 - 0.34 -2.25 -6.43 -4.24 - 2.93 - - -1.41 - - -1.22 -3.44 - - -2.2 -2.56 -2.41 -1.01 -0.5 -0.17 -0.11 -0.28 -0.18 -2.29 -1.41 -1.58 -0.46 -0.74 -1.34
-0.49 0.45 1.36 0.32 -1.25 1.3 1.61 2.49 -1.93 -0.11 0.34 1.55 -1.76 2.06 - - -0.47 -2.7 - -0.75 -3.77 -5.29 - - - 1.04 0.28 - - - - - - - - - -1.76 - - - -2.47 -1.21 -2.96 -1.47 -0.19 0.14 1.41 2.23 2.61
3.25 3.92 -1.95 - - - -2.95 - 2.25 2.46 2.83 - - - - - 1.26 0.54 - - - - - -2.96 - - - - - - - - - - - - - - - - - - - -0.32 - - 0.8 - -
0.75 3.15 -2.85 - - - -0.68 -1.9 - -0.93 2.36 -2.31 0.92 2.33 - - 0.74 0.26 - -1.55 -0.61 -4.51 -1.42 - 2.09 - - -0.69 -0.74 - -0.61 -0.6 - - -0.61 0.29 0.23 0.08 0.84 - -1.99 -1.26 -0.56 2.27 - - 0.56 - -
-1.09 3.41 -1.84 -0.36 0.5 0.98 0.47 - - 1.32 0.99 -1.13 2.19 2.74 - - -2.12 -0.49 - -3.0 -1.21 - -1.85 -1.95 - - 1.12 - - 0.3 0.4 0.4 - 0.73 - 0.33 - 0.84 - -3.23 -1.65 -2.21 -2.62 -0.35 - -0.75 - - -0.08
-0.77 4.05 - - - - - - 0.69 2.34 1.62 1.14 - - - - - -1.4 - -4.35 -0.2 - - 0.07 3.78 - - - - - - - - - - - - - - -0.22 0.46 0.33 - -1.7 - - - - -
2.0 - - - - - - - - - - - - - - - - - - 5.49 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
1.74 3.82 -0.31 3.12 - - 1.56 -1.49 - 0.75 3.13 - 0.87 0.34 - - -0.06 -0.21 - - - - -1.5 -0.87 - - - - - - - - - - - - - - - - - - - - - - - - 1.33
0.43 2.45 -1.92 -3.91 -2.49 -2.39 -1.46 -1.04 -1.9 2.62 3.36 - - - - 1.25 -0.24 -0.05 - 2.3 -5.27 -4.46 -5.03 -3.87 -0.25 2.71 2.36 - - - - - - - - - - - - - - - -3.97 -1.6 -1.19 -1.02 -0.29 - -6.43
2.25 2.1 -2.71 -1.55 -0.89 -2.54 -0.22 -0.72 -0.58 -0.31 3.11 - 0.37 -1.35 1.51 2.04 0.65 -0.13 - 1.33 -2.76 -4.36 -1.83 -4.46 0.85 0.44 - -1.7 - -1.68 -1.01 -0.8 - - -1.59 - - -0.73 - -2.74 -1.49 -1.68 -0.96 1.24 0.09 -0.58 -1.04 -0.76 -0.51
-0.84 -0.71 2.01 -3.5 -1.58 -2.63 -0.57 -0.3 1.35 -1.57 -0.01 -3.42 0.84 0.45 - - -1.88 0.71 - -0.72 0.68 -0.01 0.72 0.65 0.68 -2.32 -2.69 0.09 0.86 0.91 0.32 1.17 -0.3 0.02 0.97 1.04 0.62 0.48 0.01 -0.35 -0.08 0.41 0.29 -0.48 -1.3 -1.0 -1.52 -5.32 -
-0.63 2.28 -0.57 -0.15 1.09 2.1 - -1.84 1.24 - 0.35 -0.89 1.28 -2.07 -0.97 1.1 - -0.82 1.1 1.48 - -3.85 - -1.67 - 3.26 1.96 - - - - 0.41 - - - - - - - -5.15 -0.91 -2.58 -4.27 -3.37 0.71 0.99 -1.72 -2.12 -
-2.4 4.93 - - - - - - - - 2.2 - - 3.44 - - - - - 0.43 - - - - - - - - - - - 0.5 - - - - - - - - - - - - - - - - -
- 3.49 - - - - - - - 4.48 3.81 - - - - - - 0.48 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
2.85 -0.37 3.89 -2.89 - -3.9 0.54 -0.6 -2.94 2.91 3.61 - -1.34 -2.4 -1.46 -0.44 - -3.69 - -1.23 -6.21 - - - - -2.67 - - - - - - - - - - - - - - -4.1 -5.36 - 0.57 -2.79 - - - -
-1.28 1.55 - - - - - - 0.78 -1.82 0.51 2.87 - 1.56 - - - -0.25 - 2.82 - -2.23 - - - 1.49 1.47 - - - - - - - - - - - - - - - - 1.04 3.5 2.3 - - -
-1.63 2.74 -2.63 - - - -0.17 -0.16 -1.6 - 0.39 - - 3.24 - - -3.54 -2.98 - 2.47 0.94 - - - - -0.53 -0.35 0.22 -0.17 - -0.04 0.36 -0.07 - - 0.88 -0.0 1.08 0.4 -0.27 0.88 0.31 0.61 -1.92 0.99 -0.76 - - -
- 4.71 - - - - - - - - 3.27 - - - - - - - - 3.55 - - - - - - - - - - - - - - - - - - - - - - - 0.58 - - - - -
- 3.37 -0.67 - - - - - - 4.8 3.06 - - - - - - -0.77 - - - - - - - - - - - - - 0.33 - - - - - - - - - - - - - - - - -
-3.69 1.52 0.13 -1.26 1.31 - 0.74 0.55 -0.82 1.84 2.23 0.47 3.11 2.11 - - - -0.56 - -0.86 0.01 - -2.73 -1.14 - - - - - - 1.16 -0.83 - - - - - - 1.61 - -2.85 -1.69 - 2.27 0.84 - - - -
-2.09 4.61 - 1.7 - - -0.35 2.46 1.92 - 2.37 1.27 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.8 - - -
1.75 3.21 -0.57 - 2.54 - - 0.86 -0.47 1.54 2.83 - - 1.81 - - 1.82 -0.78 - -3.75 -1.25 -2.3 -0.51 -2.68 - - - - - - - - - - - 1.2 - - - -2.17 -1.51 0.22 -1.21 - 0.76 0.97 - - -
- 3.81 - - 2.3 2.6 - 0.01 - 0.76 3.27 - - 2.49 - - - - - -3.77 - - - - - - - - - - - - - - - - - - - - - - - - - - - 2.58 -
3.17 3.79 -1.75 - -0.78 - 0.38 -2.35 0.73 1.15 2.05 - - 0.94 - - -1.56 -1.79 - -3.0 - - -4.34 -2.0 1.04 - - - - - - -2.06 - - - - - - - - -3.94 -2.89 - 0.82 -0.35 1.33 0.57 - 1.92
-0.75 2.2 -2.43 - - - - - 2.21 0.14 2.08 - - 4.96 - - - -4.61 - - -1.02 - - - - - - - - - 0.61 - - - - - - - - - -2.84 - -1.51 - - - - - -
0.35 5.29 - - - - - - - - 2.17 - - - - - 2.07 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
1.57 3.35 -2.2 - - 0.41 0.14 0.81 -0.88 3.19 3.39 - -0.31 0.66 - - 0.43 -0.47 - -3.36 - -0.9 -3.42 -0.37 - - - - - - - 0.69 - - - - - - - - - - - 0.98 0.77 - - - -
-2.33 3.39 -1.75 - -1.05 0.95 - -0.65 - 2.31 0.96 0.94 - 3.44 - - - - - 0.57 - - -1.99 -1.66 2.85 - - - - - - 1.23 - - - - 1.68 - - - -1.67 - - -2.73 - - - - -
- 2.87 2.87 - - - 1.41 - - - 0.7 - 3.27 4.2 - - - - - -0.06 -1.88 - - - - - - - - - - - - - - - - - - -0.91 - - - -1.49 - - - - -
- 2.4 - - 4.05 4.03 - -0.84 - 1.09 2.88 - - - - - - - - - - - - - - - - - - - - -0.54 - - - - - - - - - - - -2.92 - - - - -
1.78 4.35 2.31 - - - -0.49 - - 1.47 2.88 - - 2.12 - - - 0.06 - -4.26 - - - - - - - - - - - - - - - - - - - - - - - -0.36 - 1.67 - - -
1.51 3.83 1.97 - - - 1.39 - 0.8 2.41 3.08 - - - - - 0.84 -0.36 - -4.89 - - - - - - - - - - - - - - - - - - - - - -1.43 - 1.69 - 0.01 - - 1.4
2.03 -0.39 -2.6 -0.91 -3.05 -1.69 0.37 0.66 -3.86 0.82 0.76 - 0.6 0.18 -1.16 0.01 -0.46 -0.17 - 0.85 -0.27 -0.15 -0.48 0.05 -0.58 1.56 1.72 -0.93 -0.02 -0.31 0.17 0.72 -1.15 -2.55 -0.51 0.28 -0.49 -0.7 0.35 -0.66 0.1 0.33 0.76 0.3 0.59 -0.38 -3.91 -3.14 -2.69
1.2 0.9 -0.63 -3.02 -2.45 -1.88 -0.24 0.07 0.84 -0.95 1.66 -0.37 1.44 1.27 -0.12 0.07 0.4 0.33 3.06 0.97 -2.11 -1.58 -2.05 -0.85 2.17 0.36 0.15 -1.88 -2.5 -1.78 -2.2 -1.92 -1.57 -4.53 -2.41 -1.71 -3.23 -2.81 -2.82 -2.7 -2.4 -2.02 -2.57 0.23 -0.34 -0.44 -4.44 -0.93 -0.47
0.74 -0.26 0.1 -2.47 -2.87 1.06 -0.56 -0.48 0.96 -2.11 0.5 -0.2 0.87 0.51 0.16 0.75 0.87 0.01 0.1 0.7 0.07 -0.85 -0.28 -0.74 -1.02 0.3 -0.23 0.12 -0.58 0.41 -0.94 -0.42 -0.21 -0.31 0.1 0.32 -0.74 0.23 0.24 0.07 0.35 0.36 0.72 0.27 -0.49 -0.51 -2.23 -1.68 -1.8
2.01 3.97 3.71 - - - - -0.59 - - 2.47 - - 1.61 - - - -2.88 - 1.49 - - - - - - - - - - - - - - - - - - - - - - - - - 1.99 - - -
2.32 3.08 - - - - -0.97 -0.96 -1.56 -4.2 0.97 - 0.32 1.84 0.37 - 1.25 -0.63 2.1 0.37 -1.0 - -1.74 -3.31 2.82 - - -0.52 -0.17 - - -1.66 -0.5 -0.34 - - -0.83 0.45 - -4.49 -2.52 -1.4 -2.54 1.09 - -1.39 -0.21 - -
-0.6 2.55 - 1.35 - - -2.23 -1.22 - 1.15 2.73 - - 4.91 - - -2.25 - - - - - - - - - - - - - - - - - - - - - - - - - - -3.3 - - - - -
1.01 3.24 - -1.96 0.5 3.62 - - 1.5 0.73 4.0 -1.19 - -0.97 - - - -2.21 - - - -2.36 - -3.89 - - - - - - - -1.5 - - - - - - - - - - - - - - 0.3 - -
0.21 4.74 - - - - - - - - 2.41 - - 3.99 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-4.37 0.28 -1.08 - -2.97 -2.66 -2.61 -0.96 - 1.93 4.06 -3.5 - 4.54 - - -3.07 - - -6.82 -4.53 -5.46 -3.87 -5.26 - - - - -1.46 - - -1.09 - - -1.72 - - - - -2.64 -1.88 -2.33 -1.69 -4.0 - - - - -
-0.06 2.29 -1.95 -4.11 -2.23 3.09 -0.47 -0.22 -0.72 1.83 1.78 2.39 -1.27 0.47 - - 1.73 -0.47 -0.81 -0.78 -2.05 -1.58 -2.35 -1.25 1.42 -2.09 -2.86 - -0.59 -3.42 -2.23 -1.04 - -1.63 -2.0 - -0.91 -1.22 - -2.77 -2.04 -1.9 -2.01 0.25 -4.28 -1.47 -0.41 0.79 -1.06
0.87 4.13 0.59 - - - - - 0.45 3.37 3.1 -0.33 - 1.28 - - - - - - - - - - - - - - - - - 0.38 - 1.7 - - - - - - - - - -3.0 - - - - -
-0.49 1.58 -0.49 2.25 0.16 2.75 1.89 2.16 -1.34 0.81 1.01 -1.11 1.85 1.03 - - 0.4 1.22 - -0.66 -2.53 -5.06 -2.29 - - - - - - -0.95 - -1.11 -0.95 - - - - - - -3.14 -2.53 -1.56 -1.72 1.7 0.18 -1.83 - -0.75 0.22
0.79 3.55 1.19 - - 3.03 -0.1 0.09 -1.57 1.84 3.49 - - - - - - -2.25 - -2.75 -2.01 -2.31 -1.79 -1.04 - 0.15 - 0.47 - - -0.04 0.91 - - - - - - - - -1.04 -2.47 -2.18 -2.85 - - - - -
-4.1 3.11 -0.34 - -2.5 - -0.57 - - 3.81 1.44 - - 4.38 - - - - - -3.22 - - - - - - - - - - - -2.14 - - - - - - - - -3.58 - - - -0.44 - - - -
2.07 2.77 -0.8 - - - 1.37 0.74 -1.23 1.06 0.88 -0.04 2.11 2.6 - - 1.0 1.12 - 1.36 -1.97 -2.03 -2.69 -0.32 - - - - - - - 0.39 - - - - 0.63 1.24 - - - - - 2.02 - - - - -
-1.58 -1.65 2.1 -3.6 - -1.22 1.79 0.72 -0.66 2.28 2.62 - 0.32 0.41 - - -4.73 -3.12 - -3.43 -0.08 -5.42 -1.77 -6.3 - - - 0.54 0.4 -0.87 -0.65 0.13 -0.88 -0.26 0.14 0.88 0.48 1.07 1.25 -0.67 -0.16 0.7 0.8 -1.85 - - -0.19 -2.93 0.36
0.68 4.0 -0.7 -2.42 - -0.27 1.32 -2.74 1.04 2.66 3.13 -1.22 0.49 -0.67 - - 0.85 0.29 - -3.05 -2.56 -2.14 - - - - 0.15 - - - - -1.57 - - - - - - - -2.03 -3.47 - - -0.78 0.7 - - - -
0.11 3.59 2.31 - - 3.54 - 0.38 - 2.6 1.66 - 1.26 - - - - 0.46 - - - -1.09 - - - - - - - - - - - - - - - - - - - - - -0.65 - - - 1.96 -
0.89 0.79 3.15 - - -4.62 -0.58 0.85 0.93 0.97 3.38 0.35 -1.42 -1.65 0.49 -0.95 -1.03 0.84 -1.79 -2.1 -3.28 -3.83 -2.99 -4.28 -0.55 -3.43 -1.12 -3.77 -3.59 1.17 0.96 0.9 -5.49 -2.9 -4.31 -2.14 -5.73 -4.45 -3.84 -5.42 -4.18 -4.45 -4.21 -1.01 0.13 0.98 -0.88 -2.15 -2.68
-7.23 -1.36 -0.49 - - -1.49 -3.17 -0.66 -3.99 1.64 3.14 - - 5.07 - - - - - -9.4 -4.36 -5.82 - -5.86 - - - -2.46 - - - -1.87 - - - - -1.34 - - -4.42 -3.78 -4.99 -2.33 -5.36 - - - - -
-2.19 0.52 -1.05 -3.2 -6.61 -5.98 0.17 1.23 1.13 -1.12 0.52 -0.17 2.15 2.4 - - -0.94 -0.08 - -2.47 0.12 -0.14 0.16 0.05 0.26 -0.76 -0.24 0.08 0.18 0.57 1.04 1.1 -0.89 -1.07 -1.48 -0.28 0.28 0.01 -0.37 -1.46 -1.32 0.45 -0.38 -1.02 -0.02 1.19 -2.6 -3.01 -3.11
- 3.08 -0.06 - - - 1.73 - - 0.62 2.95 - - 4.75 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -2.83 - - - - -
- 3.99 0.0 - 4.63 - 1.61 - - - 1.02 - - - - - - -2.47 - - - - - - - - - - - - - 1.04 - - - - - - - - - - - - - - - - -
-2.91 3.56 1.39 2.0 - - 3.36 -1.28 0.98 0.97 1.23 2.09 - - - - - 0.89 - -2.28 - -0.29 - -0.29 - - - - - - - 1.02 - - - - - - - - -0.66 - -0.54 -1.31 - 0.86 - - -
- 5.4 - - - - - - - - 2.73 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-0.73 4.35 - - - - - - 2.85 0.35 3.87 - 2.26 - - - - -2.71 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
0.11 3.71 - - 1.07 - - - 1.76 0.46 2.43 - - 2.98 2.87 - -1.77 -0.65 - 0.41 -2.06 - - - - 1.42 - - - - - - - - - - - - - - - - -1.01 0.77 - - - - -
2.24 2.2 1.45 -0.19 -0.76 0.76 -1.61 -0.34 -0.28 -2.02 1.34 -7.38 - -3.19 -1.17 0.15 -1.53 -0.82 0.2 0.8 -1.37 -0.32 -1.07 -0.13 -2.91 1.64 1.43 -0.27 -1.55 -2.65 -1.57 0.21 -1.33 -1.74 -0.58 -0.32 -1.16 -0.85 -0.81 -1.45 -0.79 -0.28 -0.19 -0.69 0.92 0.58 -0.93 -0.38 -0.74

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.