Heatmap: Cluster_317 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule
Ovary
Egg cell
Pollen tricellular
Pollen
Sperm
Flower (buds)
Flower
Panicle
Milk grains
Seeds
Seedling
Seedling (12-day-old, DongJin)
Seedling (12-day-old, DongJin, mutant)
Seedling (22-days-old, 22C)
Seedling (22-days-old, 30C)
Meristem
Stems
Callus
Leaf
Leaf (Azucena)
Leaf (Kinandang puti)
Leaf (Pandan wangi)
Leaf (Tadukan)
Leaf (chilling-treatment, 4C, 33h)
Leaf (drought-stress, 1 day)
Leaf (drought-stress, 3 days)
Leaf (drought-stress, 15 min)
Leaf (drought-stress, 45 min)
Leaf (drought-stress, 90 min)
Leaf (drought-stress, 90 min, recovery 15 min)
Leaf (drought-stress, 90 min, recovery 90 min)
Leaf (drought-stress, 90 min, recovery 210 min)
Leaf (heat-stress, 15 min)
Leaf (heat-stress, 150 min)
Leaf (heat-stress, 210 min)
Leaf (heat-stress, 120 min, recovery 15 min)
Leaf (heat-stress, 120 min, recovery 60 min)
Leaf (heat-stress, 120 min, recovery 120 min)
Leaf (dry season, irrigated field)
Leaf (dry season, rainfed field)
Leaf (wet season, irrigated field)
Leaf (wet season, rainfed field)
Root
Root (heading stage)
Root (tillering stage)
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
-2.35 5.36 0.61 - - - - - - - - - - - - - - - - - -0.89 - - - - 2.47 - - - - - - - - - - - - - - - - - - - - - - -
0.02 4.77 - - - 3.76 0.33 -2.08 - - -1.43 - - 1.33 - - 0.51 - - - - - - - - - - - - - - 0.22 - - - - - - - - - - - -2.78 - - - - -
- 3.65 - -0.64 - 1.78 - - - - - - - - - - - 0.11 4.97 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
1.15 4.81 - - - 3.4 - - 1.08 - - - - - - - - - - -0.84 - - - -1.08 - - - - - - - 2.23 - - - - - - - - -1.77 - - - - - - - -
0.36 5.16 - - 3.59 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- 5.1 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 3.87 - - - - - - - - - - - - - - - - -
- 5.61 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-0.33 4.96 -1.16 1.38 - - - -2.22 0.3 - 0.57 -2.81 - 2.35 - - -1.43 -4.26 - -2.92 -6.22 - - - 1.33 -1.79 - - -2.01 - - -0.98 - - - - - -1.43 - - -5.49 -4.58 - -2.16 - -0.59 - -1.34 -4.13
-0.36 5.52 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 0.76 -0.7 - - - - -
-0.73 5.11 - - - 2.89 - - - - -0.9 - - - - - - - - -4.49 - - - - - - - - - - - - - - - - - - - - - - - -0.04 2.29 - - - -
0.45 4.41 -1.29 1.91 -1.41 3.29 -1.32 -2.32 -2.42 - -0.54 - -0.84 0.69 0.43 0.49 -0.02 -0.18 - -0.05 -3.86 -4.19 - - - -0.97 - - - - -0.61 -2.6 - - - - - - - -4.01 -3.31 -3.43 - -1.51 -1.31 -1.33 - - -
-1.29 5.42 - - - - - - - - 0.16 - - - - - - - - 2.21 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-2.35 4.38 0.39 - 3.14 2.9 - -2.69 0.34 -3.93 -0.8 - -0.63 0.86 0.69 - -1.31 -2.55 - -6.47 - - - -3.26 - - - - - - - - - - - - - - - -3.43 - - - - 1.42 -0.32 - - -
0.5 4.37 - -0.53 0.18 3.52 -1.4 -1.39 -0.93 -2.64 -2.21 - - 1.28 - - -1.02 -2.03 - -0.48 - - - - - - 0.59 - - - - 0.99 0.87 - - - - - - - -1.27 - - -0.39 0.61 - - - -
- 5.53 - - - - - - - - - - - - - - - 1.48 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
0.68 4.89 - 0.84 1.4 3.74 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- 5.27 - - - - - - - - - - - 3.39 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
0.39 5.39 - - - - - - 1.55 - -2.99 - - - - - - - - -2.69 - - - - - - - - - - - 1.39 - - - - - - - - - - - - - - - - -
0.77 3.52 -0.65 -2.73 -0.41 3.23 -1.87 -1.33 -2.63 -1.0 -1.31 -3.34 - 1.22 0.17 - -2.36 -2.32 3.69 -0.71 -4.02 -4.1 -5.64 -1.92 - -0.2 -1.09 - - - -1.89 -2.88 - - - - - -0.45 - -5.19 -4.68 -3.23 -3.6 -2.51 -0.68 -1.81 -2.08 -0.44 -1.04
- 5.61 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
1.25 4.34 -2.62 -1.47 - 2.13 -1.75 -2.22 -1.2 -1.93 -3.1 - -2.0 1.43 - - 2.21 -2.56 2.19 -1.62 - - - -4.23 - -0.72 - - - - - -1.36 - - - - - - - - -3.78 - - -0.3 -0.87 -0.23 -0.91 -1.15 1.65
- 5.34 - - - 2.29 -0.94 - - - -3.42 - - - - - - - - -0.73 - - - - - - - - - - - 1.06 - - - - - - - - -1.4 - - - - - - - -
0.45 5.14 - 3.57 - - - - - - -1.37 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-0.43 4.12 0.32 -2.46 -0.36 3.48 -2.37 -1.63 -1.27 - -2.08 - 0.07 1.21 1.01 -0.6 -2.34 -0.96 - 0.18 - -4.16 -4.37 -3.53 - 0.8 0.89 - - - - -0.85 -0.49 - - - - - - -4.28 -3.9 -2.16 -2.82 -0.84 -0.17 -0.66 - -0.3 -
- 5.12 - - - 3.83 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-0.78 4.77 - - - - - - - - 0.05 - - - 4.3 - - - - - - -0.84 - - - - - - - - - - - - - - - - - - - - - - - - - - -
0.29 4.99 - - - 3.16 - - - - -3.31 - 0.04 0.59 - - - -1.87 - -2.08 - - - -1.34 - - - - - - - 0.55 - - 0.96 - - - - - - - - -2.41 - - - - -
-1.87 4.58 -0.14 - -0.23 3.5 -3.81 0.18 -0.18 - -0.63 - - 1.69 - - -3.0 - - -3.85 -4.55 -1.56 - -3.15 - - - - - - - -2.5 - - - - - - - -3.05 -2.16 - -2.12 -2.22 0.11 0.09 - -1.22 0.6
- 5.61 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- 5.21 1.37 - - 2.46 - - - - -3.28 - - 1.89 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-2.41 4.85 0.06 - - 3.79 - - 2.15 - - - - -0.43 - - - - - - -5.52 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- 5.29 - - - 3.19 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -0.41 - - - - - - - -
- 4.8 - 2.56 2.53 2.56 - - - - -2.5 - - - - - - - - - - - - -0.05 - - - - - - - 1.25 - - - - - - - - - - - - - - - - -
-0.85 4.54 - - 3.41 3.26 - -1.39 - - -1.57 - - 1.16 - - - - - - - -3.04 - -2.4 - - - - - - - -1.09 - - - - - - - - - - -0.6 -1.09 - - - - -
0.91 5.3 - - - - - - 2.78 - -0.34 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-0.2 5.17 - - - 3.35 - - - - -2.38 - - - - - - - - - - - - - - - - - - - - 0.77 - - - - - - - - - - - - - - - - -
-0.7 4.34 -1.98 0.31 0.28 3.23 -1.43 -1.32 -0.94 -2.42 -2.13 - -0.05 2.02 -0.41 0.63 -2.88 -2.93 0.71 -1.2 -5.12 -5.68 -6.05 -4.12 -0.27 -0.65 -1.76 - -2.57 - - -2.03 - - - -3.13 - - - -5.43 -5.72 -5.97 -4.23 -1.07 -0.49 0.02 - - -
0.7 4.47 -0.16 0.4 -0.56 2.22 -4.2 -0.92 1.03 -1.27 -1.69 - -0.49 1.03 - 0.19 1.05 -0.76 0.94 -1.67 - -3.74 -2.42 -2.29 0.2 - -0.13 - - - - - - - - 0.52 - - - -1.69 -1.51 -4.02 -1.44 -2.56 - -1.62 - - -
1.07 3.99 0.81 0.47 -2.62 1.99 -2.58 -1.15 -3.14 -2.12 -0.09 -3.02 -0.1 0.25 1.0 1.87 -2.31 -1.09 2.74 -1.81 -6.1 -4.79 -5.76 -3.15 -0.52 -0.05 -0.38 - - -3.71 -3.89 -0.8 - - - -2.93 - -3.34 - -7.36 -3.97 -4.9 -4.4 -2.78 -1.42 0.33 -2.12 -1.56 -2.18
-0.25 4.65 - 1.06 - 2.95 - - - - -4.42 - - - - - - -1.76 - - -0.98 - 0.1 -0.61 - 1.33 - - - - - 2.28 - - - 1.59 - - - -1.48 - - - - - - - - -
- 5.6 - - - - - - - - -1.49 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-2.29 4.91 - -1.21 -0.61 2.79 -2.22 - 0.7 - - - - - - - -0.04 - - -4.97 - - - - - - - - - - - - - - - - - - - - - - - 0.32 - - 1.8 1.61 -
- 5.37 2.3 - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.51 - - - - - - - - - - - - - - - - -
-0.51 4.5 0.13 -2.6 0.18 3.85 - -3.77 - - -2.8 -0.92 -1.55 -0.09 - - - -2.25 - -1.62 -2.74 -2.97 - - - - 0.27 - - - - -1.11 - - - - - - - -3.88 -3.24 - -1.6 -1.06 1.1 0.19 - - -
- 4.95 - - - - - 3.66 2.45 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- 5.27 - - - - - - - - - - - - - - - - - -2.17 - - - - - 3.37 - - - - - - - - - - - - - - - - - - - - - - -
- 5.15 - - - 3.41 - - - - - - 1.53 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
0.21 4.92 - - - 3.44 - - 2.19 - -3.01 1.08 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-1.31 5.19 - - - 3.19 - - - - - - - - - - - - - - - - - - - - - - - - - 1.61 - - - - - - - - - - - - - - - - -
-3.77 4.78 -0.89 - - 1.68 - - 0.61 - -4.89 -0.31 1.22 3.37 - - 0.41 -0.02 - - - - -1.21 - - - - - - - - - - - - - - - - - - - - - - - - - -
-0.21 4.77 1.42 -0.98 -0.77 1.82 -1.1 -2.0 0.73 - -1.77 - -0.44 2.3 - - 0.13 -1.21 - -1.26 -4.92 -4.32 -2.52 -1.82 - - - - - - - -1.19 - - - - - - - -5.13 -2.31 -2.25 -1.53 -0.84 -1.45 -0.63 - - -
-2.15 5.07 - 1.08 - 2.46 - - - - -3.37 0.98 - - - - - -2.52 - - - - - - - - - - - - - 2.31 - - - - - - - - -1.4 - - - - - - - -
-4.09 4.83 -0.46 -1.42 -0.24 3.39 - - - -5.62 -5.41 - - 1.33 - - - -2.53 - -6.0 -1.52 - -1.82 0.02 - - - 0.76 - - - 0.38 - - - - - - - -2.02 - - - -0.99 - - - - -
-1.44 4.7 -4.45 -0.36 - 2.99 -3.41 -2.82 -2.04 - -1.03 0.59 0.43 1.91 - - -0.87 -3.09 - -3.68 - -4.61 - -4.42 0.09 0.71 -1.38 - - - - -1.52 - - - - - - - - -5.11 - - -3.73 -1.4 -1.48 - 0.32 -
0.12 5.16 - - 1.62 - - -0.17 - - - - - - - - - - - - -0.41 0.54 - - - - - - - - - 1.13 - - - - - - - 0.6 - - 0.33 -0.04 - - - - -
- 5.61 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-0.39 3.4 -3.32 -0.55 -0.99 2.62 0.83 1.12 - - -5.54 - - - - - -3.44 -2.98 4.68 -6.02 - - - - - - - - - - - - - - - - - - - - -3.42 - - -1.53 - - - - -
-2.54 4.4 -0.35 0.33 3.17 1.84 - - - - - - - - - - - - - - -0.51 - -2.17 -1.75 - - - - - - 1.23 1.24 - 0.9 - 0.67 - - 0.43 -1.76 -0.58 - 0.5 - - - - - -
- 5.47 - - - - - - - - -0.37 - - - - - 0.58 - - 0.79 - - - - - - - - - - - - - - - - - - - - - - - -0.35 - - - - -
1.14 4.52 -0.61 0.96 0.25 2.66 0.33 0.53 - - -2.4 -0.89 - 2.24 - - -0.1 -1.37 - -1.44 - -3.23 -2.73 -2.11 - 1.43 - - - - - -0.96 - - - - - - - - -3.02 - - -3.6 - - - - -
1.14 4.65 -3.4 -0.2 -1.3 2.59 -1.73 -1.22 -3.14 -2.35 -3.41 -1.49 -0.68 -0.01 - - -1.76 -1.33 - -0.4 -5.65 -5.2 -5.2 -3.35 - 0.48 0.04 0.43 - - - -2.04 - - - -1.05 - - - -3.07 -3.25 -1.58 -0.91 -0.28 0.77 0.47 - - -
- 5.35 - - - - - - 2.12 - - - - 1.56 - - - -0.01 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.