Heatmap: Cluster_9 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule
Ovary
Egg cell
Pollen tricellular
Pollen
Sperm
Flower (buds)
Flower
Panicle
Milk grains
Seeds
Seedling
Seedling (12-day-old, DongJin)
Seedling (12-day-old, DongJin, mutant)
Seedling (22-days-old, 22C)
Seedling (22-days-old, 30C)
Meristem
Stems
Callus
Leaf
Leaf (Azucena)
Leaf (Kinandang puti)
Leaf (Pandan wangi)
Leaf (Tadukan)
Leaf (chilling-treatment, 4C, 33h)
Leaf (drought-stress, 1 day)
Leaf (drought-stress, 3 days)
Leaf (drought-stress, 15 min)
Leaf (drought-stress, 45 min)
Leaf (drought-stress, 90 min)
Leaf (drought-stress, 90 min, recovery 15 min)
Leaf (drought-stress, 90 min, recovery 90 min)
Leaf (drought-stress, 90 min, recovery 210 min)
Leaf (heat-stress, 15 min)
Leaf (heat-stress, 150 min)
Leaf (heat-stress, 210 min)
Leaf (heat-stress, 120 min, recovery 15 min)
Leaf (heat-stress, 120 min, recovery 60 min)
Leaf (heat-stress, 120 min, recovery 120 min)
Leaf (dry season, irrigated field)
Leaf (dry season, rainfed field)
Leaf (wet season, irrigated field)
Leaf (wet season, rainfed field)
Root
Root (heading stage)
Root (tillering stage)
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
- 2.57 - - - - - - - - -2.59 - 1.59 5.25 - - 0.63 -1.45 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-1.17 -0.06 -2.81 - - - -1.29 -1.69 1.46 -3.35 -2.01 -1.31 -4.7 4.61 - - 4.1 -4.11 -1.0 -6.84 - - - - -2.57 - -1.67 - - - - -5.77 - - - - - - - - - - -5.54 -5.11 -2.37 -1.67 - - -4.25
-3.36 3.09 0.89 - - - 0.53 - - - -1.94 - -0.8 5.02 - - - -2.14 - -1.44 -3.09 - 0.06 -1.69 - - - - - - - 0.61 - - - - - - - - - - - -2.15 - - - - -
-4.39 -1.41 - - - - -2.69 -4.04 0.35 -3.75 -1.16 -6.71 1.3 1.22 -4.39 -3.8 -0.89 2.81 3.36 -2.52 -2.45 -1.99 -2.06 -3.48 0.46 -4.78 -5.69 -2.15 -2.58 -2.5 -1.98 -1.38 -1.96 -4.44 -3.31 -1.99 -2.17 -2.55 -2.14 -4.9 -5.29 -5.03 -5.64 -0.64 -0.71 0.72 3.42 1.37 1.44
-6.05 0.07 - -3.14 -5.33 0.63 -2.33 -3.11 -5.81 -7.36 -5.4 -3.52 2.82 4.1 -0.74 - -6.71 0.13 - -1.81 -5.77 -3.78 -3.26 -1.93 4.21 -3.99 - - - -1.38 - -5.81 - - - - - - - - - - -5.71 -4.52 - - - - -3.71
-2.74 -0.53 -3.01 -1.24 -0.52 1.11 -1.55 -0.6 -3.09 - -4.22 -0.59 -1.66 5.23 -2.9 -3.74 -8.41 0.64 - -2.59 -2.79 -2.96 -3.62 -2.87 - -4.26 - -1.93 -1.51 -2.0 -2.82 -3.13 -4.97 -3.61 -3.18 - -2.05 -3.02 -2.7 -4.62 -4.6 -2.62 -3.2 -3.11 -2.75 -4.2 - - -
-1.89 -0.27 -1.86 1.63 -2.95 - - -4.62 2.04 -4.3 1.37 -2.59 -3.13 5.03 - - -4.32 -4.16 0.43 -3.03 -5.88 -4.28 -5.35 -8.7 - -2.83 - - - - - -3.14 -4.67 - -4.38 -2.41 - - - - - - - -0.6 - -2.26 -0.41 -0.58 -2.19
-2.11 1.03 -2.38 -6.06 -4.03 -1.09 1.17 1.54 -3.9 - -0.86 -4.75 0.92 0.94 - - -2.21 4.09 - -1.16 -5.6 -6.72 - - -0.53 - - - - -3.32 -3.22 -1.97 - - - - - - - - -7.14 - - -0.22 2.0 2.81 2.49 - -
-0.17 0.68 2.01 0.78 0.2 1.51 0.33 -0.3 -4.93 -2.98 0.33 -2.77 0.67 4.58 - - -1.29 0.28 - -0.44 -2.73 -5.53 -4.49 -7.74 -1.08 -1.49 -2.94 -2.37 -3.21 -1.95 - -4.18 -3.34 -3.38 -1.42 -1.36 -2.71 -2.16 -1.34 -2.44 -2.03 -2.64 -1.98 -0.66 -5.04 -5.51 -2.66 -5.27 -
-0.32 3.19 - - 0.61 - - -2.28 1.12 -1.93 -1.28 - 2.3 4.62 - - -0.53 0.08 - -2.07 -3.52 -4.14 - -2.11 - - - - - - - - - - - - - - - - - - - -3.97 -0.31 -1.13 - 0.3 -
-1.35 -0.09 -1.91 -5.39 -2.48 -1.14 -3.64 -2.46 -4.9 -3.47 -4.47 -4.82 -2.23 5.44 - 0.11 - -4.15 - -3.11 - -5.51 -6.77 -6.6 -2.09 -1.73 -1.54 - -3.42 -3.13 - -5.29 - -2.85 - - - - - - - - -6.01 -4.79 - -2.79 - - -
-3.3 -0.23 -4.18 -9.21 -9.54 -5.78 -0.74 -0.53 1.03 -2.52 -1.4 0.87 1.42 1.67 -1.51 -2.12 -0.56 2.21 0.8 -1.45 -0.01 -0.13 -0.18 -0.08 1.02 -5.18 -5.79 0.27 -0.24 0.33 -0.06 -0.25 0.03 -1.04 -0.26 -0.04 -0.14 0.36 0.13 -0.82 -0.74 -0.35 0.08 -2.04 -1.49 0.02 1.34 1.25 0.45
-4.4 -0.06 -4.18 -5.66 - - -2.15 -2.6 -3.34 -5.8 -4.41 1.8 0.15 3.4 1.06 1.8 -3.79 0.08 -0.66 0.53 -0.78 -1.49 -2.65 -1.32 -0.53 1.6 -0.75 -1.57 -0.96 -0.71 -1.45 -1.1 -1.68 -1.46 -0.69 -0.48 -0.5 -0.04 -0.38 -1.04 -1.87 -0.54 -1.03 0.62 2.08 1.55 -2.77 -4.32 -4.64
-1.27 0.5 -0.62 2.75 1.92 0.99 1.08 1.25 -2.84 -4.96 -2.05 -5.44 -0.83 4.68 -1.34 -2.32 -2.99 0.04 - -2.87 -5.14 - - -4.73 - - - - - - - - - - -3.42 - - - - -5.68 -5.52 -11.23 -4.06 -4.08 -2.17 -2.14 -2.32 -3.99 -
-1.99 -0.26 -2.87 -0.67 -0.89 3.78 0.21 -0.36 -2.89 -1.12 -1.04 0.89 1.84 1.9 -4.37 -3.35 -1.4 2.15 -0.86 -1.14 -1.45 -0.85 -1.52 -0.96 -0.18 -3.48 -3.7 -1.41 -1.51 -1.08 -1.31 -1.76 -2.29 - -1.45 -0.89 -1.49 -1.22 -1.49 -6.77 -5.91 -6.98 -6.83 1.08 0.75 1.14 0.23 -2.08 -1.91
-1.1 2.72 - - - - -1.0 1.51 -0.69 - -4.91 - 2.7 4.97 - - - -3.17 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-1.16 0.24 -3.01 -4.33 - - 3.02 2.57 - -2.93 -1.18 - 2.59 2.55 - - -3.39 2.92 - 0.31 -1.27 - -1.2 -4.64 - - - - -1.39 -0.72 -2.23 1.81 -1.91 - - - - - -2.14 -2.16 -2.07 -0.81 -0.76 1.5 - -0.6 -0.67 - -
-4.65 0.07 -0.89 - - 1.65 1.09 1.78 - -2.43 -1.62 -1.47 3.38 3.73 - - -1.36 3.36 - -0.93 - - -4.36 - - - - - - - - - - - - - - - - - - - - 0.73 -0.83 -1.1 -1.76 - -
- 2.15 -1.87 - - - - - - - - - - 2.31 - - - 5.3 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
1.3 1.22 -1.84 0.86 2.28 1.56 0.66 1.25 -0.84 -2.12 -1.1 - 1.06 3.46 -2.16 -2.14 0.63 -0.48 1.16 0.29 -2.61 -5.35 -3.14 -4.05 -2.09 -0.91 -3.44 -2.05 - -3.29 -3.55 -3.19 -1.51 - - -1.68 -2.26 -0.56 - -3.15 -2.31 -1.01 -1.34 -0.01 0.96 0.79 - -2.91 -0.97
0.54 -1.5 -0.69 -4.43 -5.13 -2.11 -1.68 -1.77 0.17 -3.83 -0.58 -0.37 2.81 2.08 1.17 1.76 -4.06 1.68 0.98 0.61 0.56 -6.2 0.57 -5.37 -1.27 1.35 0.84 -0.71 -0.55 -1.14 -1.51 0.34 0.04 -4.02 0.21 0.64 0.98 0.08 -0.2 -5.12 -3.46 -4.56 -5.01 -1.92 -4.85 -4.57 - - -
1.14 0.84 0.44 -1.49 -0.71 -2.64 0.94 0.28 -1.28 -1.24 -1.7 0.42 3.47 1.8 - - -1.46 3.12 - 0.72 -3.87 -3.76 -2.49 - 0.88 - 0.11 0.92 - - - -0.38 - -0.9 - - 0.33 -1.54 - - -3.74 - - 0.38 -1.95 0.32 -1.6 -1.42 -
-2.98 -0.29 -1.91 -3.79 - 1.82 -1.38 -1.37 1.05 -1.25 -0.07 0.94 3.71 3.63 -2.34 - -5.83 2.4 - -2.95 -6.07 -2.21 -3.36 -1.28 -2.27 -3.74 -2.65 - - -2.47 - - -3.41 - - -3.45 - - -3.64 - -6.93 - -6.17 -4.56 -0.01 0.62 1.31 -1.93 -
0.32 1.0 0.86 1.38 -1.27 0.25 0.41 1.48 - 2.44 0.98 - 0.66 1.42 - - -0.54 2.62 - 1.0 -0.45 -2.18 -1.55 -2.13 0.82 - -0.6 - - 0.62 -0.64 -0.2 0.78 - - - - -0.6 -0.55 -3.46 -1.4 -1.22 -0.97 -0.47 - -0.59 0.16 -0.86 -0.76
-1.49 1.8 -4.2 0.73 1.23 2.73 -1.58 -0.08 -2.27 -6.7 -2.81 -1.84 0.02 4.74 - - -3.81 -0.53 - -2.85 -3.81 -5.67 -1.55 -4.07 -0.42 - - -3.02 - - -1.93 -4.16 -2.0 - -2.91 - -3.13 - - -5.82 - -5.99 - -0.99 -0.15 -2.22 - - -
-7.94 1.28 - -5.38 -2.24 -3.38 -3.0 -2.3 -3.97 -3.38 -0.49 - - 3.21 - - - 5.15 - - -7.96 -7.01 -6.02 -6.12 - - - - - -3.05 - - - - - - - - - -4.91 -4.75 - -4.65 - - - - - -
-2.37 0.39 -4.65 - - 3.07 -2.96 -3.95 1.95 -4.98 -1.09 0.03 2.99 3.29 - - 1.15 2.99 - -3.48 -5.82 - -5.41 -5.27 - -3.83 - -3.51 - - - - - - - - -3.62 - - - - - - -2.76 1.88 -0.46 -1.04 -3.37 -4.13
-0.83 3.17 - - -0.18 - - - - 2.13 1.24 - - - - - - 4.86 - - - - - -1.5 - - - - - - - - - - - - - - - - - - - -3.57 - - 0.44 0.09 -
-1.18 0.73 -0.77 -0.03 -0.97 - -3.35 -2.86 -3.98 -2.98 -1.17 - 3.15 4.91 - - -1.37 0.84 - -2.3 - -6.32 - - - -1.64 - - - - - -4.37 - -1.93 - - - - - - -6.38 - - -0.37 -1.68 - -2.74 -0.89 -2.26
0.5 1.99 0.1 -3.73 - 0.9 -0.99 -3.45 -0.62 -3.09 -1.18 -0.59 -1.05 4.63 -1.4 - 0.95 -2.3 0.29 -2.65 - -3.45 -3.46 -6.23 1.85 -2.85 - - - -1.58 - - - - - - - - - - -4.97 -4.44 - 0.95 0.38 0.2 - - -2.37
-6.38 -0.39 -0.24 - - - -1.2 -1.02 -1.71 - -2.46 -0.09 4.02 3.31 - - -2.93 2.79 - -1.96 -0.82 -1.1 -0.83 -1.11 1.53 -3.33 -1.6 -0.58 -2.09 -2.8 -0.7 -0.75 - -1.57 - -1.48 -0.44 -0.76 -0.52 - - - - -7.33 - - -0.41 -1.02 -
-2.61 -0.48 3.08 1.96 1.77 -1.86 0.73 1.35 -3.71 -1.21 0.24 -4.98 -0.88 4.22 -3.2 -3.18 -5.47 0.32 - -1.18 -3.55 -2.25 -0.89 -3.31 0.37 -1.81 -2.21 -2.62 - -2.18 -4.64 -4.69 -4.31 -3.95 - -4.39 -2.34 -3.84 -4.54 -2.54 -3.28 -1.73 -2.24 -1.22 - -5.0 -4.47 -3.85 -
-5.79 -2.24 - -5.61 -7.58 -0.85 -3.18 -5.35 3.42 - -4.55 -4.09 -0.76 -1.18 -3.85 - -1.84 4.05 -2.12 -3.21 0.57 -0.29 0.79 0.81 -1.38 -5.25 - 1.09 0.75 0.38 -0.47 0.07 0.73 -3.45 -1.17 0.02 -1.17 -0.75 -0.19 -3.32 -2.51 -2.64 -3.28 -4.5 -3.75 -3.38 -5.26 - -
-4.33 0.14 -2.26 - - - - - 0.4 - 0.86 -1.33 3.09 2.42 - - -0.05 3.53 - -3.46 -0.97 -1.9 -2.82 -2.13 2.72 - - -0.96 - -1.64 -1.72 -0.73 -0.53 -2.22 -1.3 -1.0 -1.26 -0.62 0.16 -2.56 0.36 -1.07 -0.78 -2.35 -2.84 0.34 - - -
-6.25 0.35 -3.63 - - -3.17 0.09 0.92 -2.57 -5.84 -3.12 -0.56 2.94 4.74 - - -3.78 1.87 - -4.4 -2.97 -2.22 -2.38 -0.95 - - - -2.25 -2.39 -1.6 -5.47 -4.61 -1.71 -3.03 -0.41 -0.91 -1.4 -0.73 -1.36 -4.43 -2.59 -5.53 -3.4 -4.59 - -6.19 - - -
-6.76 -4.11 -2.49 - - -6.65 1.84 2.8 -2.63 -4.28 -2.08 2.2 1.58 4.26 - -5.17 -2.31 0.36 - -7.51 -0.42 -1.47 -1.3 -1.05 -2.3 -8.02 -8.12 -1.25 -0.61 -1.24 -0.95 -1.13 -0.19 -1.58 -1.45 -0.29 -0.59 -0.2 -0.37 -8.9 -9.98 -8.52 - -7.49 -6.68 -5.59 - - -8.32
-0.89 0.98 -3.5 -2.09 -2.31 -2.2 0.18 -0.01 -0.15 -1.29 -1.1 -0.42 -1.65 2.85 -0.23 0.67 0.14 0.91 - 0.9 -1.76 -2.93 -3.41 -1.9 1.35 0.42 -0.85 -1.26 - -1.5 -2.41 -2.25 -1.34 -1.97 -2.16 - - -1.97 -1.67 -0.25 -0.32 0.23 0.61 2.59 2.25 1.25 -0.11 - -
-2.0 0.03 -3.69 -4.83 -5.84 0.37 0.28 0.52 0.82 -2.54 -0.2 -0.62 1.31 1.81 -2.93 -4.98 0.38 2.52 -0.11 -0.76 -1.03 -1.01 -0.34 -0.87 1.56 -5.35 -4.32 -0.51 -1.18 -0.33 -1.11 -1.02 -0.76 -1.77 -1.97 -0.68 -0.96 -0.46 -0.35 -2.8 -2.44 -2.15 -1.58 -1.74 -1.3 -0.3 2.01 2.33 0.99
-2.72 -1.33 -5.85 - - - 1.81 2.65 -0.97 -0.86 -2.71 0.95 2.96 3.2 1.38 -0.19 -2.37 2.51 - -1.62 - - - - - -1.51 2.51 - - - - - - - - - - - - - - - - -1.14 0.22 0.2 - - -
- 2.11 -2.11 - - - - - - - -2.79 - - 5.02 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 0.94 3.31 - - -
-3.34 2.49 - -0.62 -0.46 3.18 -2.76 - -1.45 - -4.25 -0.99 - 4.69 - - -1.41 -0.95 - 1.08 - - - -1.69 - - - - - - - - - - - - - - - - -1.01 - -2.29 0.1 - -0.26 - - -
-5.81 0.8 -8.3 - - - -1.01 -3.05 -5.04 -5.18 0.6 -0.98 3.23 3.98 - - 0.07 3.46 0.26 -5.76 -6.88 -5.95 -7.12 -2.42 -4.16 -7.66 -6.51 -6.37 - -4.39 -5.93 -8.29 -7.13 -6.85 -7.04 -5.4 -7.46 -5.47 -5.34 -10.59 -11.21 - -10.08 -1.8 -0.29 -1.06 0.86 0.55 -0.46
-2.37 1.66 -2.37 - -3.79 -1.8 1.06 -0.15 -2.94 0.2 0.74 -2.63 2.99 3.94 - - -3.99 2.81 - -0.19 -2.26 -4.05 -3.42 -3.41 1.62 - - - - -1.2 - -3.1 - - 0.15 - - - -1.36 -2.15 -1.02 -2.76 -0.31 -3.45 - - -1.47 - -
-0.56 2.65 -2.38 -1.61 - -0.35 -2.16 -4.19 -4.3 -0.15 0.27 -0.76 -3.89 3.44 -1.44 0.16 -2.0 2.98 - -6.38 -1.67 -5.32 -3.43 -1.6 -1.37 -0.81 - -1.44 -2.62 -2.58 - -0.52 -0.46 -0.49 - -1.57 -0.24 -0.56 -0.88 -3.76 -2.99 -2.35 -1.0 -1.27 2.15 1.99 - -0.95 -
-7.24 1.19 -3.45 - -0.29 2.43 -5.64 -5.64 -1.44 - -5.13 - - 4.07 - - -3.9 4.47 - -6.67 -4.88 -3.9 -5.78 -4.06 - - - - - - - -0.34 - - - - - - - - - - -5.12 -6.72 - - - - -
-2.57 0.36 -2.28 - - 2.1 - - 0.22 - 0.16 0.89 2.85 4.1 -0.64 - -1.45 3.53 - -4.17 -5.34 - -4.55 - -0.47 -1.98 - - - - - - - - - - - - - -5.35 - - - - - - -1.87 -0.64 -
-4.59 2.0 0.06 - - -1.73 -0.99 -0.33 - -1.06 -2.63 - 0.83 4.22 - - - 0.06 - -1.63 - - - - - - - - - - - - - - - - - - - - - - - 3.21 2.68 1.57 0.32 - -
-6.4 -2.5 -7.59 - - -5.95 - -6.96 - - -6.1 -7.48 0.54 4.7 - - - 0.32 - -2.87 -0.84 -9.07 -1.25 -6.4 - - - -1.98 -0.97 -0.51 -0.99 -0.51 -1.59 -1.93 2.16 1.5 1.21 1.43 1.0 -3.77 -2.78 -1.32 -0.79 -2.51 - - - - -
-5.82 -1.74 - - - -6.51 1.2 2.5 -4.07 -2.53 -1.68 -0.5 1.22 4.06 -3.94 -3.28 -1.98 1.31 - -0.08 0.14 -3.2 0.21 -4.11 -0.38 -4.82 -3.34 -1.62 -0.51 0.13 0.01 -0.85 -0.55 -1.66 -0.29 -0.2 -0.09 -0.0 0.27 -0.66 -0.57 -0.15 -0.43 -1.19 -3.24 -1.93 - - -
-4.19 1.36 -3.55 - - - 0.15 -0.37 -5.98 -5.94 -0.95 -1.81 1.4 4.37 -1.93 -2.9 -1.09 1.59 - -0.84 -5.04 -4.61 -3.76 -4.21 1.35 2.97 -0.43 - - -2.32 - -1.78 -2.92 - - - - -3.55 - -4.57 -3.41 -2.59 -3.61 1.03 -0.77 -0.87 -2.54 -3.46 -
0.92 3.41 -0.65 -2.87 -0.45 - - -2.74 -1.06 -1.78 -0.51 - -1.53 3.19 - - 0.38 4.24 - -0.75 - - - - - -0.81 - - - - - 0.14 - - - - - - - - - - - 0.54 - - - - -
-0.86 0.47 0.45 -2.83 -1.99 -0.29 -1.14 -1.82 -3.69 -0.19 0.54 -6.67 -1.66 5.15 - - 1.36 -1.9 - -3.65 -7.08 - -7.16 - - - - - - - - - - - - - - -3.5 - -7.02 - - - -0.52 - - -2.56 0.05 -0.75
0.91 2.19 0.4 - 0.93 -0.3 - - -1.44 2.84 2.51 - - - - - -2.1 4.37 - -6.28 - - - - - - 0.13 - - - - -0.6 - - - - - - - - - - -1.5 -2.77 0.07 0.09 - - -
-1.58 3.45 - 3.55 0.99 - 0.04 - - - - - - 2.24 - - - 4.19 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-2.92 1.73 - - - - - - - - -5.51 -1.57 -0.97 1.57 - 2.17 - 4.95 - -2.67 -0.97 - - - - -0.06 - - - - - - - - - - - -0.2 - 0.65 -1.06 0.3 -1.75 -2.13 - - - - -
-5.45 0.46 - 1.09 - - - -4.8 - - - - - 4.28 - - - 4.68 - - -5.4 - - - - - - - - - - -1.92 - - - - - - - - - - - - - - - - -
-4.32 -1.41 -6.07 - - - - - - -5.85 -3.68 -2.82 2.76 4.91 - -3.8 - 1.44 1.19 -3.18 -1.33 -2.39 -1.95 -1.38 -3.7 - - -0.87 -3.0 -1.69 -1.98 -1.37 -2.42 -1.06 -3.06 -0.88 -1.78 -0.96 -0.81 - - -6.6 - -5.6 -0.72 -5.7 - -5.44 -
-3.6 0.86 - - - 2.67 -0.81 - - - -1.89 2.34 3.24 0.26 - - -0.67 2.76 - -1.0 0.27 -3.75 -3.1 -5.23 - - -0.8 - - - -23.2 2.47 - - 0.3 -0.07 -1.27 -4.61 -0.63 -3.2 -2.09 -1.29 -1.75 1.83 - -1.98 -0.71 - -
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Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.