Heatmap: Cluster_187 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule
Ovary
Egg cell
Pollen tricellular
Pollen
Sperm
Flower (buds)
Flower
Panicle
Milk grains
Seeds
Seedling
Seedling (12-day-old, DongJin)
Seedling (12-day-old, DongJin, mutant)
Seedling (22-days-old, 22C)
Seedling (22-days-old, 30C)
Meristem
Stems
Callus
Leaf
Leaf (Azucena)
Leaf (Kinandang puti)
Leaf (Pandan wangi)
Leaf (Tadukan)
Leaf (chilling-treatment, 4C, 33h)
Leaf (drought-stress, 1 day)
Leaf (drought-stress, 3 days)
Leaf (drought-stress, 15 min)
Leaf (drought-stress, 45 min)
Leaf (drought-stress, 90 min)
Leaf (drought-stress, 90 min, recovery 15 min)
Leaf (drought-stress, 90 min, recovery 90 min)
Leaf (drought-stress, 90 min, recovery 210 min)
Leaf (heat-stress, 15 min)
Leaf (heat-stress, 150 min)
Leaf (heat-stress, 210 min)
Leaf (heat-stress, 120 min, recovery 15 min)
Leaf (heat-stress, 120 min, recovery 60 min)
Leaf (heat-stress, 120 min, recovery 120 min)
Leaf (dry season, irrigated field)
Leaf (dry season, rainfed field)
Leaf (wet season, irrigated field)
Leaf (wet season, rainfed field)
Root
Root (heading stage)
Root (tillering stage)
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
-0.81 2.85 -1.39 -2.15 -0.44 2.93 -3.02 -2.66 1.43 -2.22 -1.61 0.1 0.3 0.76 -0.37 -0.16 -0.21 0.35 -0.96 0.23 -3.85 -0.52 -3.11 -0.94 1.0 -0.03 1.28 -3.05 -1.58 -0.35 -0.65 -0.65 -3.34 -5.57 -5.85 - - -3.24 -23.65 -3.78 -1.9 -2.37 -2.28 0.68 1.3 0.39 1.14 -0.52 -0.76
-0.17 2.47 -1.93 -2.32 -1.79 2.16 -2.52 -2.29 -0.55 -1.99 -1.84 -0.48 0.26 0.92 -1.2 -0.64 -0.85 -0.34 -1.16 0.21 -1.96 -1.16 -2.57 -2.08 -0.02 -0.65 0.59 -1.62 -1.5 1.14 -0.3 0.36 -1.72 -2.79 -0.79 -0.94 -1.3 -0.95 -1.42 -2.49 -0.64 -1.73 -0.59 0.59 1.13 0.01 2.2 1.69 0.62
-0.2 4.31 - -1.96 - 3.15 - -0.47 0.83 -1.18 -0.88 -0.46 -1.27 1.81 - - 0.67 -1.93 - -2.54 - - -4.04 - - - - - - - - -1.85 - - - - 0.18 - - -2.11 -1.67 -2.44 -0.48 0.07 0.79 -0.57 -0.04 0.69 -
-0.58 4.51 0.85 - - 3.5 - - 3.4 - -2.82 - - - - - 0.77 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- 4.88 - - - 2.93 - - 2.59 - - - - 2.53 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
0.03 4.77 - - - 3.97 - - 0.83 - -1.97 - - - - - - -2.92 - - - - - - - - - - - - - 0.67 - - - - - - - -0.16 -1.35 - - - - - - - -
1.78 4.65 0.18 -0.03 - 3.8 - - 2.11 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
0.46 2.76 0.25 -2.52 0.69 2.94 -1.84 -1.38 -4.97 -1.84 -0.83 -1.02 0.75 1.19 -0.36 -0.22 -0.38 -0.39 - -0.44 -0.59 -2.89 -0.58 -1.16 0.59 -1.62 -1.3 -0.86 -1.11 -2.7 -3.08 0.11 -0.53 -1.32 -1.37 -0.38 -4.41 -0.14 -2.31 -3.34 -1.72 -2.02 -0.96 0.06 1.29 1.81 0.93 -2.6 -2.9
-2.12 4.49 - 1.47 1.81 3.87 - -1.48 1.5 -0.73 -1.53 - - - - - - - - - - - - -1.49 - - - - - - - -0.18 - - - - - - - - - - - - - - - - -
0.48 4.37 - - - 1.97 - -0.63 1.98 - -2.71 - - 0.83 - - - - - -4.41 - - - - 3.86 - - - - - - 0.66 - - - - - - - - - - - -1.71 - - - - -
-0.36 4.96 - - - 3.7 - - - - -1.12 - - - - - - - - - - - - - - - - - - - - 1.5 - - - - - - - - -0.33 - - - - - - - -
-1.28 2.99 - - - 2.95 - - - - - - - 4.94 - - - -2.29 - - - - - - - - - - - - - 1.06 - - - - - - - - - - - - - - - - -
-0.11 4.76 - - - 2.83 1.8 2.6 1.84 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -0.31 - - - - - -
0.51 4.18 - - -0.46 3.19 - - -0.0 - -3.87 - - - - - - -2.58 - 0.31 - -1.61 - -1.06 - - - - - - - - - - - - - 3.91 - -0.63 - -0.82 - - - - - - -
-1.06 4.86 - - - 4.28 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
1.37 4.11 0.98 -1.64 -0.04 2.32 -0.12 -4.08 1.34 -1.22 -0.21 0.67 -2.2 - - - 1.5 -2.09 - -0.13 -1.63 - -2.16 -1.29 0.42 -0.01 0.56 - - - - -1.2 - - - - - -0.1 - - -4.53 -2.15 - -0.93 -1.17 0.9 0.02 - -
-1.62 2.7 -1.55 -0.59 -0.48 3.11 -1.29 -1.87 -0.72 -1.78 -1.69 -2.26 0.89 1.87 - -0.31 -0.86 0.45 -0.53 0.41 -2.26 -2.01 -2.3 -2.22 0.15 -2.12 -1.21 -1.32 -4.57 -0.0 -1.8 -0.49 -1.93 -1.28 -0.49 -0.83 -1.32 -1.81 -1.28 -2.65 -0.86 -1.99 -0.83 1.04 -0.56 -0.65 1.9 0.83 -0.13
-0.23 3.53 1.31 1.94 1.36 3.44 - -3.16 1.45 -3.41 -2.0 -1.52 2.58 1.34 - - -0.59 -0.85 - -0.03 - - - - - -0.04 -0.1 - - - - - - - - - - - - - - - - -0.51 - - - - -
- 5.09 - - - 3.9 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-1.6 4.62 - - 2.39 4.15 - - - - -5.14 - - - - - - - - - - - - 0.08 - - - - - - - - - - - - - - - - - - - - - - - - -
-2.48 2.87 -1.78 - - 2.73 - - -2.21 - -2.31 -1.54 - 4.04 - - -1.45 - - -3.96 -2.27 -2.13 -2.41 -0.81 1.73 - - - 1.74 -0.29 - -1.92 - -0.27 -0.6 -0.66 - -0.15 - -2.25 -2.71 -1.54 -1.6 -4.46 0.95 0.04 -0.79 -1.31 -
- 3.34 - - - 4.29 - - -0.6 - 0.02 - - 4.1 - - - - - - - - -1.32 - - - - - - - - - - - - - - - - - - - - - - - - - -
-4.79 4.1 0.74 - 1.36 3.23 - -11.99 1.29 - -4.64 -0.75 -0.15 1.79 - - - -2.09 - -2.68 - - -1.91 -1.65 - 1.91 - - - 1.71 - -0.49 - - - 0.32 - - - - -1.37 - -1.25 - - - - - -
-1.74 4.34 -1.92 -0.03 2.07 3.42 - 0.05 2.43 - -4.63 - -0.32 1.05 - - -1.75 -3.9 - -2.4 - - -3.08 - - - - - - - - 1.0 - - - - - - - - - - -1.74 - - - - - -
1.27 4.89 - - - 3.95 - - - - - - - - - - - - - - - - - 0.51 - - - - - - - - - - - - - - - - - - - - - - - - -
- 5.07 - - - 3.86 - - - - -0.16 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-2.98 4.4 -1.74 - -0.51 3.88 - - 2.05 - -2.9 -0.25 - -0.91 - - -25.3 -1.4 - - -2.23 - - -0.97 - - - - - - - 0.19 - - 0.87 - - - - -2.16 -0.89 - -1.32 - 0.24 - - - -
0.48 4.09 0.95 2.99 0.75 3.41 3.03 - - - -1.81 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-1.21 2.54 -1.9 -0.16 -1.21 2.05 -2.11 -1.42 0.23 -1.88 -1.81 -1.06 0.19 0.93 -1.43 -1.36 -0.91 -0.93 - 0.3 -2.06 -2.01 -2.74 -2.44 -0.03 -1.26 -0.29 -2.31 -1.64 1.14 -0.42 0.37 -2.35 -2.2 -1.56 -1.19 -1.53 -1.79 -1.45 -2.47 -0.97 -1.5 -0.63 1.16 0.25 -0.66 2.68 1.96 1.04
0.3 5.11 - - - 3.52 - - - - - - - - - - - - - - - - - 0.91 - - - - - - - - - - - - - - - - - - - - - - - - -
-1.01 5.25 - - - 3.23 - - - - -0.28 - - - - - - -1.66 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
0.2 3.79 - -0.42 1.0 4.06 -1.3 - - - -0.18 - - 0.91 - - - -3.87 - -0.98 - - - -0.48 - - - - - - - - - - - - - - - - - 0.26 - - - - 1.63 2.53 -
-2.77 2.77 0.0 - - 3.01 - - -0.73 -2.59 -2.73 -2.76 - 4.58 - - -2.98 -2.09 - -2.98 -2.29 -1.64 -1.6 -0.04 0.47 - - - - -7.2 - 0.46 - - - - -0.22 - - -2.55 -2.0 -3.96 -1.83 -4.38 -1.75 -0.81 -1.43 - -
0.87 4.4 - - - 4.0 - - - -0.74 -2.36 - - - - - - -0.77 - - - - -1.11 - - - - - - - - 2.38 - - - - - - - - -1.2 - 1.35 - - - - - -
- 4.58 - - - 4.65 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-3.4 5.08 - - 0.75 3.37 - - -0.52 - -7.07 - - - - - -2.03 0.95 - - - - - - - - - - - - - - - - - - - - - - - - - -2.52 - - - - -
-4.08 4.4 -3.32 1.75 3.41 1.92 - -1.22 1.03 -4.27 -3.89 - -0.97 0.0 0.35 - -3.29 -0.39 - -1.57 - -4.59 -4.63 -2.77 - -0.91 - - - - - - -0.57 - - - - - - - - - - -5.1 -1.02 0.53 - - -
-1.8 4.32 - 1.91 - 3.42 1.62 2.97 - - -3.75 0.47 - - - - - -3.76 - -1.53 - - - - - - - - - - - 0.12 - - - - - - - - - - - -1.21 - - - - -
-0.87 4.96 - - - 3.4 2.38 - - - - - - - - - - - - - 0.56 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- 4.74 - - - 4.36 - - - -0.49 -0.04 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- 4.79 - - - 4.42 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- 4.71 - - - 3.69 - - - - - - - 3.3 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-1.1 4.98 - 0.4 - 2.15 1.91 - -0.19 - -0.45 - - - - - - -1.33 - - - - - -0.46 - - - - - 1.75 - - - - - - - - - - -0.82 - -0.82 -2.15 - - - - -
0.21 4.37 - 1.43 - 4.1 - - 2.87 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-0.18 5.21 - - - 2.49 - - - - - - - - - - - - - - - - - -0.12 - - - - - - - 2.19 - - - - - - - - - - - - - - - - -
-0.02 4.85 - - -0.17 3.73 - - - -1.02 -2.97 - 1.44 - - - -0.82 -0.27 - -4.51 - - - - - - - - - - - - - - - - - - - - - - - -1.85 - - - - -
- 4.97 -0.74 - - 3.49 - - -0.42 - - - 1.58 - - - - - - - -1.97 - - - - 0.82 - - - - - - - - - - - - - - - - - - - - - - -
0.13 4.49 - 1.91 1.08 3.08 - - - - -2.26 - - - - - - -3.11 - - - - - 1.05 - - - - - - - 0.77 - - - - 2.81 - - - - - - - - - - - -
0.31 4.48 0.74 1.6 2.39 3.45 -3.98 -2.81 - -2.03 -1.97 - -1.18 -0.9 - - -0.04 -1.32 - -3.27 - - - - - -3.17 -1.37 - - - - - - - - - - - - - - - - -2.48 -1.48 -1.8 - - -
- 4.94 - - - 3.61 - - 2.62 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-0.38 5.22 - - - 3.39 - - - - -1.08 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- 4.64 - - - 4.04 - - 0.67 - - - - - - - - - - - -1.22 - - - - - - - - - - 2.08 - - - - - - - - -0.94 - -0.34 - - - - - -
1.4 5.28 - - - - - - 2.7 - -0.17 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-0.79 3.45 - -0.48 -0.24 3.83 - - - - -4.24 - - 3.91 - - -1.98 -1.06 - -0.74 - -1.31 - -1.08 - 1.58 0.17 - - - - - - - - - - - - - -3.64 - -2.25 - - - - - -
0.07 4.54 - - - 4.27 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 2.41 - - - - - -
- 3.43 - 0.51 0.92 3.04 -0.12 -0.14 - - -3.18 - - 3.94 - - - - - - - - - - 3.12 - - - - - - - - - - - - - - - -1.84 - -1.09 - - - - - -
- 4.42 - 0.67 - 3.87 - - - - - - - - - - - - - - 0.34 -0.8 - - - - - - - - - - 3.27 - - - - - - - - - - - - - - - -
-1.72 4.83 -2.57 -2.03 - 2.81 - - - - -1.6 0.34 - 1.86 - - 0.2 -1.23 - -2.07 - - - - - 2.25 - - - - - - - - - - - - - - - - - - 0.04 - - - -
1.11 4.66 - - - 3.39 - - - - -0.21 1.86 - - - - - - - - - - 0.38 - - - - - - - - 2.09 - - - - - - - - 0.14 - - - - - - - -
-0.89 4.09 - 0.39 - 3.72 - - - - -1.89 - - - - - - -1.14 - -5.54 - - - - 3.69 - - - - - - - - - - - - - - - - -0.37 - -0.25 - 0.69 - - -
-0.31 4.52 -1.48 0.37 -1.58 2.83 - -2.19 -1.04 - -0.43 - - -0.36 - - - -2.16 - -2.03 - - -2.42 - 3.26 - - - - - - -0.89 - - - - - - - -2.57 -1.27 - - -0.27 0.82 - - - -
-1.31 4.84 - - - 3.89 - - - - -0.74 - - - - - - - - - - - - 0.38 - - - - - - - 1.69 - - - - - - - - - - - - - - - - -
-0.51 4.18 - - 3.8 3.83 - - - - - - - - - - 0.97 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
0.17 4.69 - - - 4.47 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
1.19 4.56 - - - 4.14 - 0.54 2.0 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- 4.44 - 3.83 - 3.72 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- 5.12 - - - 3.7 - - - - 0.27 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-0.17 5.23 - -0.35 - 2.06 - - - 0.54 1.95 - - - - - - -3.83 - - - - - - - - - - - - - - - - - - - - - - - - - -2.62 - - - - -
1.36 4.62 - - - 3.09 - - - - -0.59 - - - - - 0.28 - - - - - - - - - - - - - - - - - - - - - 3.52 - - - - - - - - - -
-2.14 5.25 - - - 2.93 - - - - -13.18 - - 1.61 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-2.68 4.85 - -0.28 - 4.0 - -1.12 - -0.37 -0.22 - - - - - -1.28 - - -2.12 - - - - - - - - - - - - - - - - - - - - - - - -1.16 - - - - -
-4.15 4.35 -1.84 - - 3.68 - - 1.1 - -5.14 - 0.17 - - - - -1.9 - - -3.45 -1.19 -3.73 0.41 - -0.64 - - - 0.78 - 0.11 - - - - - - 0.36 - -2.71 -0.51 -1.6 -3.69 1.64 -0.34 - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.