Heatmap: Cluster_52 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule
Ovary
Egg cell
Pollen tricellular
Pollen
Sperm
Flower (buds)
Flower
Panicle
Milk grains
Seeds
Seedling
Seedling (12-day-old, DongJin)
Seedling (12-day-old, DongJin, mutant)
Seedling (22-days-old, 22C)
Seedling (22-days-old, 30C)
Meristem
Stems
Callus
Leaf
Leaf (Azucena)
Leaf (Kinandang puti)
Leaf (Pandan wangi)
Leaf (Tadukan)
Leaf (chilling-treatment, 4C, 33h)
Leaf (drought-stress, 1 day)
Leaf (drought-stress, 3 days)
Leaf (drought-stress, 15 min)
Leaf (drought-stress, 45 min)
Leaf (drought-stress, 90 min)
Leaf (drought-stress, 90 min, recovery 15 min)
Leaf (drought-stress, 90 min, recovery 90 min)
Leaf (drought-stress, 90 min, recovery 210 min)
Leaf (heat-stress, 15 min)
Leaf (heat-stress, 150 min)
Leaf (heat-stress, 210 min)
Leaf (heat-stress, 120 min, recovery 15 min)
Leaf (heat-stress, 120 min, recovery 60 min)
Leaf (heat-stress, 120 min, recovery 120 min)
Leaf (dry season, irrigated field)
Leaf (dry season, rainfed field)
Leaf (wet season, irrigated field)
Leaf (wet season, rainfed field)
Root
Root (heading stage)
Root (tillering stage)
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
-1.28 3.29 -3.6 -2.59 - 3.62 -3.45 - -1.94 -3.69 0.38 2.36 -0.62 0.65 -0.07 - -1.53 -0.87 - -2.4 -3.11 -4.68 -2.12 -1.34 1.63 - -1.42 - - - -1.51 0.44 - - -0.9 - - - 0.29 -4.71 -2.28 - -1.8 -1.2 0.68 0.48 0.83 0.77 -
-1.07 2.93 -2.85 1.07 3.32 2.93 0.19 0.07 -1.15 0.1 -0.16 - -0.95 0.96 - - -0.14 -1.34 - 1.14 - -3.84 -4.18 -1.35 - -1.92 - - - - - -0.76 - - - - - - - - - -4.4 - 0.03 -0.55 -0.53 1.74 1.5 -1.22
- 2.75 -3.11 1.89 3.34 3.75 -1.49 -3.07 -1.39 - - -1.31 - - 1.3 - -0.45 -0.23 - -3.36 -3.13 -3.27 -3.76 - - -0.14 - - - 2.38 0.22 0.62 - - - - - - - - -3.17 - -2.28 - - - - - -
-1.43 4.07 -0.89 0.92 - 2.66 - - - - -0.88 - 3.69 2.12 - - - 0.67 - - - - - - 1.9 - - - - - - - - - - - - - - - - - - - - - - - -
0.36 3.35 -0.25 -3.17 -0.19 4.08 -1.17 0.01 -0.14 -2.23 -0.78 -0.56 -1.47 0.36 - - 1.06 0.59 - -0.7 -3.48 -0.41 -3.24 -1.81 - 1.1 -1.11 - - - - -0.69 -0.22 - -1.65 -0.97 -2.07 -1.47 - -4.69 -2.2 - -2.1 -1.46 -0.48 -3.05 -2.1 -2.47 -2.38
-1.13 3.78 - 0.7 3.46 2.66 0.32 0.42 -0.31 - -1.58 - - 3.51 - - -0.59 - - - - - - - - - - - - - - - - - - - - - - - - - - -3.07 - - - - -
-0.03 3.02 -2.27 -1.65 0.75 4.32 0.01 -1.5 -2.85 0.0 -1.76 -3.37 -0.04 2.68 - - 0.84 -1.58 - -1.73 -4.53 -5.33 -6.11 0.96 -0.63 -2.06 -2.11 - - - - -1.83 - - - - - - - - -3.5 - -4.25 0.15 - - -2.21 -2.56 -
0.09 3.92 - - 1.12 4.44 - - - - -0.93 -0.64 - 2.5 - - - -2.37 - - -2.76 - - -0.75 - - - - - - - 0.15 - - - - - - - - -3.56 - - - - - - - -
-2.97 4.03 - - - 4.17 - 0.52 - - -3.5 - - 1.79 - - -2.76 -4.07 - -2.17 -1.79 -1.3 -2.79 -1.12 - 1.57 - - - 0.91 - - 0.71 - - - - - - -1.18 - - -1.54 -0.75 - - - - -
-0.76 3.13 - -1.95 -0.33 4.74 - - - 0.55 0.01 0.91 - - - - -3.03 -0.16 - - - - -3.42 - - - - - - - - -0.52 - - - - - - - - - - - 1.4 -0.03 - - - 1.0
0.61 4.72 -1.4 - - 3.61 -2.11 0.22 0.18 - -2.27 -0.46 - - - - -2.16 -2.81 - 0.73 -2.35 -2.31 -2.48 -2.12 - - - - - - - - - - - - - - - - -2.58 - -0.57 0.43 - - - - -
1.27 3.93 -0.74 -3.78 -1.92 4.01 - - - -3.48 -1.86 -0.29 -0.45 -1.2 - - -4.38 -2.23 1.83 -3.02 -2.23 -3.64 -2.3 -2.88 - - - - - -0.78 - 0.07 -0.77 - - -1.05 - -1.25 - -2.22 -1.85 -0.62 -0.41 -3.56 -0.54 0.32 - -1.66 -
0.49 2.43 0.22 0.26 -1.32 3.18 0.63 0.62 1.59 -1.04 -0.3 0.76 0.48 0.73 -2.52 -3.49 1.37 0.06 0.55 -3.1 -1.28 -0.27 -1.23 -0.29 -2.29 -4.0 -3.67 -1.15 -1.8 -1.08 -1.73 -1.15 -1.41 -1.77 -1.67 -1.18 -1.57 -1.09 -1.46 -2.08 -1.19 -1.5 -1.21 -1.24 -1.12 -0.29 -2.05 -0.61 0.36
0.63 4.23 0.12 -0.97 1.88 4.08 0.55 -0.94 0.63 - -7.37 - - 0.7 - - 0.27 - - - - - - - - - - - - - - - - - - - - - - - - - - -2.83 - - - - -
-0.1 4.2 - - 2.47 4.31 -0.71 -1.7 - - -5.94 - - 0.13 - - - - - -3.84 - - - -1.71 - - - - - - - - - - - - - - - - - - - -1.19 - 0.45 - - -
0.35 3.77 -3.24 - - 3.68 -1.62 -0.52 -0.84 - -3.05 - -0.83 3.11 - - -3.38 -1.08 - -2.89 - -3.16 - -2.76 1.3 - - - - - - 0.5 - - - - 0.13 - -0.16 -2.53 -3.11 - -1.39 -1.42 - - 1.31 - -
0.07 4.22 - - - 4.87 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
0.47 2.39 -1.92 2.47 3.5 3.12 1.52 1.62 1.04 - 0.26 - - 0.13 - - -2.27 -4.71 - -1.72 -4.83 -4.19 -0.06 -4.04 - -0.08 - -0.98 - - - - - - - - - - - - -3.58 -2.57 - -2.4 -0.85 - -1.32 - 0.85
0.57 2.78 0.14 -1.17 3.36 3.9 1.1 -2.8 0.44 -4.01 -2.21 -2.18 -1.55 -1.93 0.61 - -0.99 0.23 - -2.55 -4.82 -4.62 -4.75 -2.78 - -0.91 - - - - - 0.62 - - - - - - - - - - -3.26 -1.65 0.13 -0.62 -1.76 -1.04 -0.94
-3.39 3.53 -2.66 -0.14 3.15 3.21 - - 0.75 - -2.06 0.07 1.45 0.63 - - - -2.18 - -0.52 -1.98 -0.75 -4.07 -0.83 - 0.44 - - - - - 1.44 - - - - - 1.58 - -1.7 -1.56 -1.2 -2.11 -2.7 - - - - -
-0.79 3.95 -1.44 -0.18 - 3.98 -1.44 -1.84 -2.17 -0.87 -2.66 -0.81 - -1.6 - - -0.62 -3.87 - -1.04 -3.84 -4.26 -3.94 -3.04 - - 1.2 - - - - - - - - - - - - -3.54 - - - -0.92 - -0.06 1.22 1.44 1.58
0.75 3.77 0.24 - 0.04 4.22 -1.54 -0.21 - -1.19 -0.07 - - -0.7 - 2.84 -0.71 -0.49 - -1.8 -2.9 - -2.01 - - - - - - - - - - - - - - - - -2.71 - -1.88 - -2.61 - - - - -
0.76 4.07 - - 2.86 2.91 3.15 1.66 - - - - - 1.86 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-0.96 3.5 -2.11 -1.4 1.68 3.63 -0.85 -1.03 -0.47 -1.87 -1.87 -0.55 -1.47 0.55 - - - -4.0 - -0.56 -3.08 -4.14 -2.31 -3.12 2.59 0.19 - 1.19 - - - -0.96 - - - - - - - -2.4 -1.95 -3.45 -0.6 -0.03 -0.83 1.15 - - -
0.96 3.59 1.84 -1.64 -1.43 3.38 -0.33 0.09 -0.21 -0.4 0.41 - 0.6 0.28 - - 1.0 0.47 - -0.45 -1.7 - -2.23 - 0.0 - -2.38 - -2.24 - - -1.52 -1.94 - - - -1.27 -0.83 -2.37 -1.7 -1.62 -1.59 -0.96 -0.26 - -3.25 0.18 0.06 -1.58
-1.08 3.75 - -0.81 2.56 4.35 -0.83 -0.42 0.0 - -0.5 - - - - - - - - -5.23 - - - -2.48 - - - - - - - - - - 1.08 - - - - - -1.85 -1.61 -1.96 -2.52 - - - - 0.94
- 4.05 1.23 1.48 - 4.75 - - - - -1.42 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
1.23 2.46 -0.46 -3.16 0.23 3.86 -0.18 -0.71 1.15 -2.01 0.64 -1.71 - -2.2 1.86 2.39 -2.35 -0.39 2.34 -0.54 -5.55 - - - -0.81 -0.72 -1.25 - - - - - - - - - - - - - -5.33 - -4.79 -0.24 - -2.73 -1.56 - -
-2.19 2.55 - -2.56 -3.71 4.06 -1.45 -0.93 -2.86 -1.9 -0.32 -1.69 2.87 0.45 - - - -2.11 - -2.51 -0.65 - 0.47 -1.86 - - - -0.87 -1.16 -0.86 -1.38 0.32 0.07 - 1.4 - - -0.58 - -1.78 -0.79 -0.45 -0.07 0.48 -0.42 - - - -
-1.06 4.45 - - - 3.7 - 0.58 0.88 - -2.75 0.65 - - - - - - - - 0.46 - -1.43 - - - - - - - 2.52 - - - - - - - - - - - 0.11 - - - - - -
2.08 2.95 - - -1.59 4.81 -1.02 -3.89 - - -1.4 - - 0.15 - - 0.29 -2.0 - -4.44 -2.64 - - -4.38 - - - - - -0.43 - - - - - - - - - -4.22 -4.41 - - - - - - - 2.02
0.98 2.87 -3.45 - 0.6 4.07 -2.15 -2.11 1.92 -3.97 -1.41 -0.52 - 2.05 - - 0.55 -1.34 2.31 -0.14 -3.99 -3.46 -4.29 -2.76 - - - - - - - 0.14 - - - - - - - - -1.78 - - -4.44 0.35 - - -1.02 -0.93
1.67 3.09 0.09 -1.95 0.52 3.94 -0.05 -0.44 -2.06 -2.52 -0.8 -2.0 0.38 1.04 - - 0.56 -1.0 - -0.05 -4.36 -4.17 -2.93 -4.1 - -0.71 -0.9 -1.93 - - - -1.26 - - -1.7 - -1.81 - - -4.09 -2.41 -1.44 -0.86 -0.5 1.5 1.23 - -2.12 -
0.09 3.5 1.67 -1.42 0.06 4.57 - - -0.02 -1.08 -1.27 -0.78 - - - - -0.47 -5.01 - - - - - - - - - - - - - - - - - - - - - - - - - -1.89 - - - 2.26 -
0.61 3.22 - 1.21 1.58 4.09 0.09 -1.9 - - -3.63 0.16 - 0.49 - - -2.1 - - -5.64 - - - - - - - - - - - -0.61 - - - - - - - - - - - 0.88 - - 2.2 0.82 1.5
- 4.14 - - - 4.45 - - - - -0.49 - - 2.64 - - 0.93 - - - - -0.68 - - - - - - - - - - - - - - - - - - - - - - - - - - -
0.94 1.86 -1.52 -0.3 0.57 2.99 0.06 1.12 0.44 -1.94 -2.17 0.45 2.11 2.6 -0.31 - 0.21 -1.22 -0.16 0.69 -2.69 -3.6 -2.91 -3.7 - 0.5 0.18 - - -2.02 - -1.76 -2.76 -2.6 -0.87 -3.04 -1.51 - - -1.62 -2.02 -0.87 -1.14 1.15 -1.08 -1.07 -1.39 -0.55 -1.03
-3.03 3.76 - -2.19 1.15 4.71 - -1.79 - -3.62 -3.74 - - -1.55 - - - -4.11 - 0.49 - - - - - - 2.02 - - - - - - - - - - - - - - - - -1.38 - - - - -
1.72 4.56 - - - 4.46 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- 4.63 - - - 4.59 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-0.56 4.26 -1.09 - - 3.76 -0.36 -1.35 1.9 0.21 0.16 - -0.47 1.79 - - -1.95 - - -0.3 - - - -2.37 - - - - - - - - - - - - - - - - - - - - 0.56 0.14 - - -
0.23 3.69 -1.16 0.1 0.67 4.32 1.4 0.6 - - -3.19 1.48 - - - - -0.04 - - -6.25 - - - - - - - - - - - - - - - - - - - - - - - -3.16 1.44 0.02 - - -
- 4.38 - - - 4.63 - - 0.52 - - 0.53 - - - - -3.13 - - - - - - -3.11 - - - - - - - -1.8 - - - - - - - - - - - - - - - - -
-0.19 3.68 -1.04 - -0.69 4.01 0.36 0.44 - 1.24 0.8 - - 2.7 - - -2.5 -2.49 - -1.6 -3.07 - -2.3 - - - - - - - - -1.57 - - 0.28 - - - - -3.29 -1.84 -1.03 -2.69 -0.96 - - - -0.53 -
-0.91 4.38 - - -0.39 4.24 0.23 1.76 -0.24 - -4.99 - - - - - - - - -0.71 - - - -1.58 - 0.35 - - - - - - - - - - - - - - - - -1.88 - - - - - -
1.58 3.77 1.27 0.77 1.05 3.77 -0.78 -1.23 - -2.81 -1.37 - 1.04 0.37 - - 2.54 -0.53 - -3.66 - -5.06 - - - - - - - - - - - - - - - - - - -5.6 - - -3.32 -2.12 - - -0.57 -
-0.67 4.24 - -1.48 0.89 4.53 0.32 - - - -3.94 - - - - - -0.17 - - -6.33 - - - - - 0.31 - - - - - -1.25 - - - - - - - - - -1.69 - - - - - - -
0.17 4.1 - 0.76 - 4.0 0.3 - - - - - - - - - - - - - - - - - - - - - - - - - 3.57 - - - - - - - - - - - - - - - -
1.65 3.57 -0.1 -2.39 1.76 4.09 -2.27 -3.26 1.51 - -1.31 - - - - - -3.52 -4.79 - -3.85 -4.22 -3.54 - - - - - - - - 0.67 -0.96 - - - - - - - -0.69 0.82 -0.71 1.03 -2.24 - 0.27 - - -
-1.34 3.48 -1.94 -1.83 3.91 3.88 0.09 -0.95 -1.59 -1.03 -3.69 - - - - - -2.2 -3.43 - -1.5 - - - - - - - - - - - - - - - - - - - - - - - 0.7 - - - 0.59 -0.17
-1.92 3.8 -0.18 - - 3.73 - -0.24 -1.61 - -0.53 -1.43 - 3.7 - - - - - -1.81 -3.56 -2.09 -3.39 - - - - - - - - - - - - 0.16 0.26 - -0.04 -2.35 -1.1 -1.56 -1.02 - - - - - -
- 4.07 -0.65 - - 3.4 - -2.76 2.66 - -3.35 2.1 - - - - -3.4 - - -0.34 -0.19 - - 0.23 - - 1.26 - - - - 1.33 - - -2.42 - - - - - -1.92 -1.49 0.55 - - - - - -
-0.33 4.73 - 1.18 - 4.16 - - - - 0.51 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.