- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Aerial tissue - Light - ZT1 | Aerial tissue - Light - ZT3 | Aerial tissue - Light - ZT5 | Aerial tissue - Light - ZT7 | Aerial tissue - Light - ZT9 | Aerial tissue - Light - ZT11 | Aerial tissue - Dark - ZT1 | Aerial tissue - Dark - ZT3 | Aerial tissue - Dark - ZT5 | Aerial tissue - Dark - ZT7 | Aerial tissue - Dark - ZT9 | Aerial tissue - Dark - ZT11 | Roots | Root elongation and differentiation zone | Root meristematic zone | Aerial roots and rhizophores | Shoot tips | Microphyll | Strobili | Shoot apical meristem - AC | Shoot apical meristem - Core | Shoot apical meristem - P1 | Stem - Top | Stem - Bottom | Whole plant | Aerial tissue - Stress - Dark | Aerial tissue - Stress - High light | Aerial tissue - Stress - Cont | Aerial tissue - Stress - 37C 1h | Aerial tissue - Stress - 37C 3h | Aerial tissue - Stress - 4C 1h | Aerial tissue - Stress - 4C 3h |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| -0.97 | - | -2.37 | -2.57 | -3.77 | -3.59 | -3.32 | -1.48 | -1.75 | -1.42 | -1.44 | -1.69 | - | - | -4.27 | -1.73 | -3.96 | -3.44 | 4.06 | - | -0.83 | - | -2.79 | -0.64 | 0.98 | 2.38 | -0.24 | - | -0.11 | -1.07 | -0.43 | -1.06 | |
| -1.46 | - | -3.4 | - | -3.84 | -2.67 | - | -3.6 | -3.01 | - | - | - | - | - | - | -3.8 | -2.63 | -0.29 | 4.04 | - | - | - | -3.71 | 0.43 | 2.26 | 2.18 | 0.14 | - | -1.6 | -0.29 | -0.73 | - | |
| -2.01 | -2.49 | -5.21 | -4.09 | - | -2.87 | -2.72 | -2.33 | -4.27 | -1.53 | -1.97 | -3.25 | -5.92 | - | -4.16 | -2.93 | -1.81 | -0.85 | 3.75 | -3.87 | 1.03 | 0.67 | -2.09 | -1.12 | 2.02 | 1.78 | 0.26 | -0.3 | -0.81 | -1.61 | -1.09 | -1.09 | |
| -1.15 | -0.77 | 0.11 | 0.29 | -0.03 | -2.51 | -1.41 | 0.96 | -0.2 | -0.4 | -0.48 | -0.51 | - | - | -5.21 | -2.95 | -3.17 | -0.76 | 3.67 | - | - | - | -5.37 | -2.07 | 2.51 | 0.46 | 0.07 | -13.75 | - | - | -2.69 | - |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.