- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Aerial tissue - Light - ZT1 | Aerial tissue - Light - ZT3 | Aerial tissue - Light - ZT5 | Aerial tissue - Light - ZT7 | Aerial tissue - Light - ZT9 | Aerial tissue - Light - ZT11 | Aerial tissue - Dark - ZT1 | Aerial tissue - Dark - ZT3 | Aerial tissue - Dark - ZT5 | Aerial tissue - Dark - ZT7 | Aerial tissue - Dark - ZT9 | Aerial tissue - Dark - ZT11 | Roots | Root elongation and differentiation zone | Root meristematic zone | Aerial roots and rhizophores | Shoot tips | Microphyll | Strobili | Shoot apical meristem - AC | Shoot apical meristem - Core | Shoot apical meristem - P1 | Stem - Top | Stem - Bottom | Whole plant | Aerial tissue - Stress - Dark | Aerial tissue - Stress - High light | Aerial tissue - Stress - Cont | Aerial tissue - Stress - 37C 1h | Aerial tissue - Stress - 37C 3h | Aerial tissue - Stress - 4C 1h | Aerial tissue - Stress - 4C 3h |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| -0.2 | -0.35 | 0.07 | 0.27 | -0.2 | 0.48 | 0.34 | 0.38 | 0.67 | 0.44 | 0.07 | -0.14 | -0.75 | 0.37 | 0.7 | -1.04 | -0.09 | 1.38 | 0.44 | -2.46 | -0.3 | -1.75 | -0.53 | -0.42 | -0.22 | -0.08 | -0.07 | -0.26 | 0.18 | -0.38 | -0.65 | -0.71 | |
| -0.78 | -1.75 | 0.37 | 1.06 | 0.51 | 1.21 | 1.59 | 0.75 | 0.78 | 0.2 | 0.45 | 0.81 | -3.45 | 1.2 | 1.26 | -3.45 | -1.54 | 1.18 | -1.61 | - | - | - | - | -3.53 | - | 0.94 | 1.15 | -0.46 | -1.64 | - | -2.03 | - | |
| -0.25 | -1.22 | -0.58 | 0.05 | 1.36 | 0.82 | 1.42 | 0.8 | 0.64 | 0.87 | 0.09 | 0.22 | -2.49 | -2.98 | -0.84 | -2.01 | -0.14 | 2.05 | -0.75 | - | 0.59 | -2.48 | -1.61 | -1.89 | -1.22 | -1.97 | -0.45 | -0.22 | -0.09 | -0.16 | -0.09 | -0.77 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.