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Heatmap: Cluster_136 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
-0.66 0.02 -2.31 0.45 -3.78 1.27 1.1 -0.52 -0.69 1.28 -0.21 -0.23 -0.66 -1.37 - 0.08 -1.2 1.1 1.59 - - - 0.18 -0.17 - 0.34 0.75 1.08 -0.16 0.37 0.43 -1.32
0.25 1.62 - - - 1.83 - 2.48 1.69 - - - - - 2.65 - - - - - - - - - - - 3.19 - - - - -
1.39 - - - 1.98 1.84 - - - - 1.67 - -0.24 0.43 - - 0.24 - 2.62 - - - 0.08 - - - - - 1.6 -1.78 1.9 0.06
-0.53 -1.27 1.76 0.6 0.76 1.99 0.72 -0.01 -0.6 0.83 2.65 -0.2 - 0.19 -0.96 -0.53 - 0.82 1.37 - - - -2.09 -0.62 - - - - -1.69 -2.27 - -
-1.54 -2.68 -0.3 -1.52 -0.02 2.16 1.19 -0.14 0.22 1.81 -0.16 - - -1.93 -0.42 1.07 -2.35 -0.52 1.55 - - - -1.34 -1.7 - 0.6 0.49 -0.2 0.11 1.86 - -
- - - - - - 0.8 2.23 - - - - 0.8 - - - - - - - - - - - - - - 3.17 - - 3.33 2.26
- - - - - - - 3.51 - - - - - - - - - - 4.36 - - - - - - - - - - - - -
- - - - - - - 5.0 - - - - - - - - - - - - - - - - - - - - - - - -
-0.83 -1.04 -0.81 -0.17 -1.79 -0.56 0.44 0.42 0.15 1.21 0.37 -0.38 -1.84 -2.43 -0.55 -1.02 -0.01 0.26 0.02 - - - -0.17 -1.57 1.69 0.78 0.96 1.97 -0.06 0.48 -0.53 -1.29
0.9 - 0.52 2.1 -0.63 0.43 -0.75 1.09 -0.71 0.93 1.26 2.16 - - - - - - - - - - - - - - 2.34 2.39 - - - -
-2.59 -0.61 -1.21 0.73 -2.33 0.21 0.29 0.77 -0.88 -2.64 - -2.5 -1.25 -2.47 -1.5 0.42 -0.68 0.05 2.68 - -0.05 - 0.65 0.76 - 0.62 0.83 1.43 0.73 -2.38 -1.42 0.11
0.01 - - - - 3.04 - - - - 1.21 - - - 0.79 - - 2.91 2.5 - - - - - - - - - - - 1.49 1.43
0.33 -0.36 - 0.76 - -0.12 1.23 2.54 - - 1.24 1.24 - - - 0.29 -0.38 0.46 1.6 - - - - - - 0.83 1.24 - 0.31 0.81 - -0.13
- - - - - - - - - - - 3.3 3.53 - - - - - 3.41 - - - - - - - - - - - - -
0.72 - 0.69 2.73 - 1.22 - 2.4 - -0.31 2.25 1.84 - - - 0.11 - - - - - - - - - - 1.27 - - - - 0.89
- - - - - - - 3.34 1.66 - - - - 2.97 - - - 3.44 - - - - - - - - - - - - - -
- - - - - - - - - - - 5.0 - - - - - - - - - - - - - - - - - - - -
- - 1.86 2.56 - - - 3.98 1.89 - - - - - 1.6 - - - - - - - - - - - - - - - - -
- - - - - - - 4.24 - - - 3.72 - - - - - - - - - - - - - - - - - - - -
- - - - - - - 5.0 - - - - - - - - - - - - - - - - - - - - - - - -
- - - 0.13 - 0.7 - 1.34 - - 0.48 2.55 - 0.55 -0.05 - 0.65 1.32 0.64 - - - 1.79 - - - 1.86 - 1.53 - - 0.55
- - - - - - - 2.41 - - - - - - - - - 3.06 3.56 - - - 2.72 - - - - - - - - -
- - - - - 2.78 0.13 2.79 2.05 2.59 - - - - - - 0.01 - - - - - 1.07 - - - 1.49 - - - 0.08 -
- -0.28 0.56 0.87 - 2.15 -0.21 - - - -0.23 1.41 1.03 - - - - 0.1 2.89 - - - 0.94 2.25 - - - - - -0.09 - -0.18
- - - - - - - 3.78 - - - - - - - - - 1.81 3.89 - - - - - - - - - - - - -
- - - - - - - 5.0 - - - - - - - - - - - - - - - - - - - - - - - -
2.21 - - - - - - - - - 3.06 3.27 - - - - - - - - - - - - - - - - - - - 3.23
0.6 - - 0.58 - - -0.91 0.93 -0.89 - - 2.38 -0.64 1.43 - - -0.67 -0.13 -0.8 - - - -0.66 -0.86 - 1.2 2.86 - 0.76 0.22 0.3 -0.89
- - - - - - - - - - - 3.95 - - - - - - 4.05 - - - - - - - - - - - - -
- - - - - - - - - - - 4.25 2.79 - - - - - - - - - - - - - - - 2.6 - - -
- - - - - - - - - - - 5.0 - - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - 5.0 - - - - - - - - - - - - - - - - - - - -
1.26 - - 0.75 2.49 2.83 -0.27 0.53 - - 2.03 - 0.19 -0.13 0.27 - - - 1.24 -6.68 1.69 - - - - - - - - - - -
- - - - - 2.99 - 2.21 - - - - - 1.7 - - - 3.39 2.52 - - - - - - - - - - - - -
- - - - - 0.39 0.16 - 1.95 - - - 0.42 - 1.32 - - 1.55 - - - - - - - - 2.56 3.57 - - 0.27 -
- - - - - - - 2.69 1.91 1.59 - - 2.03 - - - - - 2.88 - - - 1.83 - - - - - - 1.91 - -
- - - - - - - 4.54 - - - - - - 3.14 - - - - - - - - - - - - - - - - -
- - - -1.51 - - 1.5 2.11 1.71 -0.02 -0.07 - - - 0.79 - - - - - - - - - - - 1.77 3.82 - - - -
- - - - - - 2.92 2.8 - - - - - - - - - 4.13 - - - - - - - - - - - - - -
0.68 1.86 - - - - 0.99 - 1.74 - - 3.25 - 1.98 2.49 1.24 - - - - - - - - - - - - - - - -
0.86 0.14 1.19 - - - 0.36 2.15 2.06 - - - - - - - - 1.21 - - - - 1.08 - 2.52 1.27 - - -0.3 1.8 - -
0.29 - - - - - - 0.8 1.87 - - 2.68 1.05 - 0.8 1.04 - - - - - - - 0.97 3.07 - - - 1.46 - - -
1.7 - - 2.68 - - - 4.48 - - - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - 3.7 - - - - - - - 4.25 - - - - - - - - - - - - - - - -
-0.05 - - - - - 1.27 3.91 - - - - - 1.36 - - - 1.53 1.44 - - - - - - - - - - - 2.43 -
0.65 -0.04 - 1.39 -27.64 -0.57 0.42 3.08 0.59 -0.2 2.79 2.03 - -0.05 -1.96 - - -21.19 0.35 - -24.33 - - - -1.05 - - - - -17.29 - -
- - 0.75 0.59 - - - 1.83 - - - - - - - - - 1.08 2.74 - - - - - - - 2.59 3.39 - - - -
0.52 -0.84 -0.99 1.42 -0.62 1.03 -0.19 0.45 -0.15 -0.04 -0.37 -0.03 0.63 -2.93 0.55 - 0.6 -2.68 -0.33 - - - -2.7 -0.37 - 1.06 0.27 1.91 0.73 0.35 0.14 -0.67
- - - - - - 2.46 3.34 - - - - - - - - - 3.21 - 2.83 - - - - - - - - - - - -
0.96 0.87 -0.33 -0.47 - - -0.13 2.2 - 1.58 -0.2 - - -0.21 0.09 - - - - - - - - - 1.88 - 1.35 3.2 - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.