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Heatmap: Cluster_73 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
3.89 6.87 9.32 7.58 5.47 6.48 6.27 4.15 3.85 5.89 2.9 2.52 0.24 0.07 0.09 0.0 0.93 0.07 0.25 0.0 0.0 0.0 1.63 1.75 4.0 0.7 1.98 2.49 1.17 0.77 0.65 0.53
15.39 16.73 16.47 16.78 13.36 14.12 10.86 9.81 13.42 13.73 14.81 16.22 0.15 1.33 0.65 0.81 0.8 1.3 2.11 0.0 0.0 0.0 1.9 1.04 2.38 3.99 7.16 5.63 1.09 1.65 1.25 0.51
14.64 26.88 30.99 22.43 19.71 21.91 23.47 19.9 21.6 19.54 19.34 16.6 0.0 0.0 0.0 0.26 0.19 0.05 1.46 0.0 0.0 0.0 0.0 0.68 4.88 14.58 11.41 12.59 0.25 0.56 0.12 0.17
3.04 3.09 2.91 2.65 2.57 2.92 2.8 2.9 3.26 3.83 3.42 3.41 0.94 0.69 1.83 2.29 1.04 0.87 1.31 1.7 1.51 1.4 1.34 1.23 0.44 1.43 1.3 1.33 1.19 1.21 1.57 1.77
4.49 6.12 7.0 5.91 4.47 6.7 7.28 5.64 6.39 4.57 6.61 4.25 0.02 0.0 0.0 0.08 3.19 1.99 4.63 0.0 0.0 0.79 0.4 0.43 2.85 2.45 3.48 4.1 1.31 1.66 0.95 0.56
50.05 67.05 76.53 50.09 45.44 54.49 35.53 37.35 40.01 38.91 39.18 30.53 0.0 0.01 0.01 0.24 0.15 4.22 0.95 0.0 0.0 0.0 1.9 9.92 9.31 6.19 6.56 10.55 1.37 3.06 1.05 1.34
26.51 30.66 29.99 28.31 18.56 30.87 24.08 15.97 27.46 17.18 20.99 22.72 0.0 0.0 0.06 0.06 1.94 2.83 0.58 0.0 5.13 0.0 0.06 0.0 9.84 2.3 9.64 6.96 1.1 2.68 3.74 1.27
14.54 14.97 16.16 15.25 12.78 14.92 14.68 13.4 18.28 17.11 15.72 13.02 7.41 5.37 8.91 6.74 6.28 5.19 4.36 6.54 1.87 1.83 6.48 6.46 2.16 4.71 5.38 6.54 5.18 6.11 5.69 5.96
4.13 9.02 7.43 7.05 3.97 8.18 8.56 8.33 12.43 11.6 7.4 9.58 0.0 0.09 0.12 0.0 0.0 0.14 0.0 5.66 2.82 3.39 0.0 0.0 0.8 2.36 1.44 2.26 0.0 0.0 0.0 0.0
6.7 8.48 8.16 8.21 9.35 9.19 7.82 6.74 7.7 6.97 7.39 5.26 0.02 0.01 0.0 0.15 1.37 0.58 2.32 0.0 0.0 0.0 0.62 0.64 3.83 3.08 4.01 5.85 0.74 1.41 0.42 0.5
181.03 326.67 487.99 397.57 297.76 292.2 376.99 258.46 432.92 226.71 263.25 152.21 0.29 0.03 0.0 2.65 49.62 21.59 93.9 7.69 12.15 0.37 17.38 26.36 37.83 42.49 271.93 351.0 49.77 67.9 15.59 8.56
52.55 58.17 60.55 63.1 68.14 76.97 66.02 66.16 71.04 64.55 59.89 56.46 40.45 24.92 26.83 40.41 25.03 33.9 38.45 36.48 42.07 48.04 33.06 32.8 39.09 37.89 30.03 29.15 26.42 23.13 24.88 24.01
221.27 320.6 534.2 489.92 438.78 446.95 595.14 379.56 647.85 334.44 378.08 217.95 0.51 0.02 0.07 5.59 164.61 76.46 206.33 34.93 75.58 1.13 39.84 57.59 123.83 83.77 542.03 698.46 143.64 187.88 58.22 32.5
4.63 4.94 7.62 5.79 5.54 5.04 6.93 4.73 5.63 5.88 6.05 5.05 0.64 0.64 1.47 0.54 4.27 2.13 2.69 1.33 0.0 0.0 2.02 1.2 1.1 4.66 8.4 8.23 2.77 2.62 3.34 3.15
287.87 438.75 752.3 752.83 604.83 479.76 867.97 480.19 1144.43 703.29 677.69 333.61 0.79 0.05 0.42 6.08 326.34 117.0 579.14 33.53 463.22 11.73 86.23 51.23 163.32 37.39 338.38 328.49 237.5 316.22 155.39 226.97
50.19 66.16 77.57 67.66 61.35 70.82 63.53 50.2 63.55 51.12 51.28 44.77 0.29 0.04 0.11 1.95 1.19 2.02 6.96 0.0 0.0 0.0 2.07 8.67 33.23 20.36 21.3 22.59 3.18 4.72 3.39 4.38
1.63 1.24 1.12 1.78 0.71 1.75 0.94 0.48 1.09 1.16 1.12 1.28 0.0 0.18 0.2 0.08 0.09 0.02 0.02 0.03 0.0 0.28 0.0 0.0 0.0 0.19 0.17 0.72 0.05 0.04 0.0 0.02
21.36 34.66 36.02 18.25 23.92 21.29 17.65 15.67 18.18 15.78 19.74 11.24 0.06 0.03 0.0 0.35 0.17 1.1 0.66 0.05 0.0 0.12 0.57 2.85 3.41 2.04 2.21 5.57 0.73 0.64 0.52 0.45
1.08 2.17 3.69 2.37 2.93 2.91 2.82 1.54 2.5 3.44 1.73 1.36 1.05 0.56 1.64 2.71 1.77 0.38 1.31 0.0 0.34 0.0 2.18 1.6 1.47 1.23 1.71 2.44 1.87 1.69 1.64 0.86
8.68 10.85 10.33 10.24 9.03 10.21 9.28 9.12 10.8 10.99 9.56 9.32 5.42 4.05 5.98 5.44 5.15 3.21 4.68 1.21 6.33 6.88 5.56 5.49 2.5 3.68 3.62 5.06 4.6 5.44 4.77 5.48
331.2 407.37 460.65 462.57 350.31 471.22 391.15 211.3 373.44 345.87 308.74 320.73 0.58 0.12 0.0 0.22 1.14 0.0 0.59 2.09 0.0 0.0 0.0 0.19 48.27 9.89 27.75 43.85 2.39 4.7 1.52 1.01
20.49 30.78 32.15 35.26 35.75 31.42 26.0 34.56 31.61 35.35 22.73 24.37 7.45 0.9 0.9 5.23 3.42 9.02 2.68 0.05 0.11 0.13 7.1 4.07 0.0 7.08 4.16 3.17 3.23 3.85 4.34 3.51
5.82 6.97 7.41 5.64 7.06 7.7 7.33 5.94 6.79 6.01 5.44 5.24 0.0 0.0 0.0 0.05 1.27 1.36 1.12 0.0 0.0 0.26 0.69 0.32 3.1 3.28 6.29 5.93 0.81 1.14 0.89 0.93
44.68 57.28 60.61 51.73 49.04 61.18 45.48 38.38 47.79 38.51 39.76 31.95 10.47 5.34 4.5 9.15 6.8 4.09 8.02 25.55 4.01 12.77 8.02 9.59 27.29 25.26 21.83 26.63 6.11 6.7 6.76 6.17
12.2 19.77 18.14 17.14 17.0 18.24 20.01 7.62 15.23 13.52 10.44 11.89 0.0 0.0 0.0 0.07 0.12 0.0 0.0 0.0 0.0 0.0 0.0 0.0 3.15 0.58 1.2 3.79 0.13 0.38 0.12 0.06
13.1 21.01 27.91 24.11 21.97 23.31 22.6 16.88 28.59 14.03 17.47 14.33 0.04 0.0 0.0 0.0 0.2 0.0 0.24 0.0 0.0 0.0 0.0 0.0 12.25 8.24 16.07 15.22 0.27 0.89 0.4 0.34
2.88 2.81 2.85 2.78 2.8 2.29 2.65 2.94 3.16 3.89 3.14 3.03 0.95 0.94 1.65 3.05 1.0 1.08 1.43 1.76 1.02 0.49 1.35 1.26 0.93 1.74 1.68 1.46 1.25 1.32 1.69 1.77
20.23 30.72 42.97 30.76 39.12 35.8 23.24 21.77 35.36 20.88 23.55 18.61 0.0 0.0 0.0 0.0 0.07 2.53 0.37 0.0 0.0 0.0 0.0 0.23 0.0 2.85 2.26 0.95 0.07 0.23 0.37 0.14
16.99 18.91 22.06 22.82 19.55 22.15 25.09 25.22 27.94 24.0 20.55 17.37 0.0 0.0 0.02 0.0 3.0 0.47 0.04 0.1 0.09 0.0 0.29 0.02 0.23 1.02 3.43 3.68 1.63 1.59 0.6 0.47
3.53 4.98 3.4 5.41 3.62 3.41 2.55 2.61 5.6 5.16 5.44 4.74 0.3 0.27 0.32 0.67 0.07 0.04 0.86 1.52 0.23 0.0 0.0 0.06 0.0 0.16 0.41 0.15 0.14 0.08 0.08 0.01
68.66 106.11 128.61 108.22 102.68 107.27 90.67 89.8 106.17 83.97 78.19 69.81 0.1 0.0 0.0 0.34 0.86 0.79 0.37 0.0 0.0 0.0 0.39 3.18 59.16 25.72 46.91 52.2 1.5 3.66 0.98 0.96
14.12 24.7 20.22 19.27 10.55 13.29 7.94 7.35 10.84 11.46 12.08 14.39 0.0 0.53 0.02 0.0 0.85 0.31 2.54 0.0 0.0 0.0 0.04 0.0 0.38 0.45 3.7 2.81 0.4 0.4 0.21 0.3
3.37 3.39 4.24 2.71 2.79 3.15 2.29 3.13 2.65 2.6 2.86 2.42 0.0 0.0 0.0 0.13 0.81 0.36 0.9 0.0 1.71 0.0 0.71 0.4 1.11 1.69 0.83 1.74 0.55 0.52 0.28 0.2
4.21 4.75 5.17 4.9 4.63 4.54 4.41 5.18 4.43 3.58 4.91 3.81 0.24 1.31 1.45 0.23 0.22 0.29 0.36 0.0 0.0 0.16 0.31 0.27 0.52 1.53 1.15 1.73 0.19 0.27 0.23 0.27
7.34 12.08 13.4 11.5 11.02 13.4 12.68 8.52 12.64 8.67 10.59 6.81 0.79 0.49 0.26 1.09 0.93 1.35 1.32 0.0 0.0 0.0 0.21 0.29 2.96 5.65 3.79 5.92 0.7 1.54 0.83 0.42
423.04 453.26 526.23 558.84 509.4 532.87 393.27 329.69 419.63 409.68 509.93 447.41 21.11 202.1 90.5 25.92 12.72 10.72 14.66 0.37 2.48 0.0 9.6 7.56 3.91 55.29 114.81 96.42 18.34 17.71 14.24 13.13
90.39 128.13 185.34 147.36 143.81 179.35 156.34 82.17 124.03 68.78 106.6 70.36 9.19 4.37 6.62 9.08 10.62 12.02 14.73 7.93 17.37 20.08 10.43 15.52 20.64 13.45 30.82 31.24 10.54 17.04 17.95 15.16
3.74 8.01 12.28 9.15 17.68 10.51 9.14 11.49 19.52 16.03 8.3 4.8 0.49 0.16 0.03 0.28 2.61 2.27 2.18 0.0 0.0 0.0 1.63 1.29 2.49 5.57 2.29 1.83 3.04 2.05 3.45 2.71
5.97 7.99 11.72 9.42 6.29 10.97 9.68 7.99 10.3 7.38 6.96 5.39 0.26 0.37 0.75 0.3 0.15 0.3 0.53 1.3 0.1 0.17 0.26 0.39 4.57 1.49 5.13 3.59 0.19 0.22 0.23 0.26
9.31 11.42 12.66 11.81 10.66 12.92 11.84 12.86 16.54 11.77 10.05 9.64 0.28 4.68 3.99 0.69 0.23 0.09 0.0 1.0 1.31 2.33 0.21 0.44 1.24 2.39 1.15 4.41 0.32 0.24 0.0 0.06
342.64 371.76 478.61 477.83 364.18 504.65 426.46 282.19 508.3 342.33 379.07 312.53 0.22 0.07 0.48 0.74 3.05 0.79 1.11 0.0 38.71 0.0 0.58 0.93 35.39 4.45 10.91 16.84 4.48 5.04 2.38 3.61
6.26 8.25 12.64 9.8 7.09 6.28 8.71 11.36 9.16 12.42 9.59 6.35 0.78 1.09 1.87 0.85 0.68 0.2 0.27 4.93 3.33 1.48 0.47 0.32 1.4 0.68 2.45 1.64 0.53 0.28 0.12 0.2
42.82 47.9 56.08 38.34 64.94 49.92 62.38 26.62 69.85 38.76 61.84 47.57 0.0 0.0 0.0 1.26 1.12 0.0 1.07 0.0 0.0 0.0 0.0 0.0 0.92 23.09 16.26 18.39 0.92 1.56 0.4 0.59
51.35 70.05 85.67 66.58 71.03 73.21 92.18 52.23 76.69 63.02 77.36 49.52 0.08 0.0 0.0 1.63 2.77 4.7 1.83 0.0 0.0 0.0 7.0 3.15 0.38 47.48 45.87 68.69 3.7 4.87 4.33 1.13
65.35 94.54 116.48 100.17 91.83 113.36 109.22 63.15 88.72 57.03 74.71 50.42 0.11 0.0 0.0 2.34 0.77 0.57 1.53 0.0 0.0 0.0 0.0 2.04 0.79 87.24 97.38 171.73 0.81 2.14 0.13 0.25
48.58 69.22 71.85 60.21 46.17 66.45 51.22 33.85 58.86 42.69 52.45 45.47 0.0 0.0 0.0 0.05 0.09 0.14 0.0 0.0 0.0 0.0 0.0 0.0 0.18 1.19 7.65 22.43 0.0 0.0 0.0 0.0
155.96 264.46 260.94 160.34 151.77 146.42 79.57 135.14 185.44 174.37 158.49 183.02 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 57.2 0.0 0.0 0.0 0.0 0.0 0.0 0.0
7.91 11.47 13.98 12.37 10.42 10.17 10.75 12.07 9.72 11.61 9.79 8.49 0.0 0.0 0.0 0.03 0.36 0.15 0.05 0.0 0.0 0.0 0.03 0.29 9.38 1.71 1.21 1.17 0.16 0.5 0.19 0.05
73.39 103.7 125.51 116.71 98.22 113.94 97.42 61.36 91.91 76.63 79.91 71.58 0.24 0.02 0.01 0.76 5.13 5.97 4.21 0.7 1.61 0.0 5.45 4.88 11.23 20.42 26.94 26.76 6.14 6.96 7.51 6.73
33.87 49.73 61.1 49.01 50.23 52.45 63.53 32.48 51.77 31.72 47.71 31.76 0.0 0.0 0.03 0.4 0.42 0.18 0.55 0.0 0.0 0.0 0.0 0.09 0.12 26.58 32.01 55.96 0.61 1.21 0.29 0.12
1.74 2.6 2.74 3.77 2.1 2.78 3.15 2.51 4.1 2.46 2.7 2.34 0.0 0.0 0.0 0.0 0.16 0.17 0.03 0.0 0.0 0.0 0.0 0.0 1.29 1.1 1.48 1.66 0.09 0.31 0.26 0.18
15.28 17.76 20.34 18.6 22.42 23.49 25.67 25.09 21.68 22.02 18.62 17.26 14.27 9.79 13.48 10.89 9.14 6.83 8.31 6.5 14.22 16.36 13.78 12.46 5.56 7.95 11.57 10.39 9.37 9.17 10.79 11.46

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)