Heatmap: Cluster_73 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
0.59 1.41 1.85 1.56 1.09 1.33 1.28 0.69 0.58 1.19 0.17 -0.03 -3.43 -5.23 -4.89 - -1.47 -5.28 -3.35 - - - -0.67 -0.56 0.63 -1.89 -0.38 -0.05 -1.14 -1.74 -1.99 -2.29
1.26 1.38 1.36 1.39 1.06 1.14 0.76 0.61 1.06 1.1 1.21 1.34 -5.47 -2.28 -3.3 -2.99 -3.0 -2.3 -1.61 - - - -1.76 -2.62 -1.43 -0.69 0.16 -0.19 -2.56 -1.96 -2.36 -3.65
0.62 1.5 1.7 1.24 1.05 1.2 1.3 1.07 1.18 1.04 1.02 0.8 - - - -5.21 -5.67 -7.46 -2.7 - - - - -3.8 -0.96 0.62 0.26 0.41 -5.22 -4.08 -6.29 -5.83
0.62 0.64 0.56 0.42 0.38 0.57 0.5 0.56 0.72 0.95 0.79 0.79 -1.07 -1.51 -0.11 0.21 -0.92 -1.18 -0.59 -0.22 -0.39 -0.49 -0.56 -0.68 -2.16 -0.47 -0.6 -0.57 -0.73 -0.7 -0.33 -0.16
0.55 0.99 1.19 0.94 0.54 1.13 1.25 0.88 1.06 0.57 1.1 0.47 -7.26 - - -5.26 0.06 -0.63 0.59 - - -1.95 -2.94 -2.84 -0.11 -0.32 0.18 0.42 -1.23 -0.89 -1.7 -2.47
1.36 1.79 1.98 1.37 1.23 1.49 0.87 0.94 1.04 1.0 1.01 0.65 - -10.48 -11.09 -6.32 -7.03 -2.21 -4.35 - - - -3.35 -0.97 -1.06 -1.65 -1.57 -0.88 -3.83 -2.67 -4.21 -3.86
1.31 1.52 1.49 1.41 0.8 1.53 1.17 0.58 1.36 0.69 0.98 1.09 - - -7.59 -7.5 -2.46 -1.91 -4.2 - -1.06 - -7.52 - -0.12 -2.21 -0.15 -0.62 -3.28 -1.99 -1.51 -3.08
0.68 0.72 0.83 0.75 0.5 0.72 0.7 0.56 1.01 0.92 0.79 0.52 -0.29 -0.75 -0.02 -0.43 -0.53 -0.8 -1.05 -0.47 -2.27 -2.31 -0.48 -0.49 -2.07 -0.94 -0.75 -0.47 -0.81 -0.57 -0.67 -0.6
0.18 1.31 1.03 0.95 0.12 1.17 1.23 1.19 1.77 1.67 1.02 1.39 - -5.34 -4.94 - - -4.67 - 0.63 -0.37 -0.11 - - -2.19 -0.63 -1.34 -0.69 - - - -
0.87 1.21 1.15 1.16 1.35 1.32 1.09 0.88 1.07 0.92 1.01 0.52 -7.62 -8.05 - -4.61 -1.42 -2.66 -0.66 - - - -2.57 -2.51 0.06 -0.26 0.13 0.67 -2.32 -1.38 -3.12 -2.88
0.28 1.13 1.71 1.42 1.0 0.97 1.34 0.79 1.54 0.6 0.82 0.03 -9.0 -12.06 - -5.81 -1.59 -2.79 -0.67 -4.28 -3.62 -8.64 -3.1 -2.5 -1.98 -1.81 0.87 1.24 -1.58 -1.13 -3.26 -4.12
0.24 0.39 0.45 0.51 0.62 0.79 0.57 0.58 0.68 0.54 0.43 0.35 -0.13 -0.83 -0.73 -0.14 -0.83 -0.39 -0.21 -0.28 -0.08 0.11 -0.43 -0.44 -0.18 -0.23 -0.56 -0.61 -0.75 -0.94 -0.84 -0.89
-0.09 0.44 1.18 1.06 0.9 0.92 1.34 0.69 1.46 0.51 0.68 -0.11 -8.86 -13.24 -11.65 -5.4 -0.52 -1.62 -0.19 -2.75 -1.64 -7.7 -2.56 -2.03 -0.93 -1.49 1.2 1.57 -0.71 -0.33 -2.02 -2.86
0.32 0.41 1.04 0.64 0.58 0.44 0.9 0.35 0.6 0.66 0.7 0.44 -2.53 -2.53 -1.34 -2.79 0.2 -0.8 -0.47 -1.48 - - -0.88 -1.63 -1.76 0.33 1.18 1.15 -0.43 -0.51 -0.16 -0.24
-0.26 0.35 1.13 1.13 0.81 0.48 1.34 0.48 1.73 1.03 0.98 -0.04 -8.77 -12.64 -9.69 -5.82 -0.08 -1.56 0.75 -3.36 0.43 -4.87 -2.0 -2.75 -1.07 -3.2 -0.02 -0.07 -0.53 -0.12 -1.15 -0.6
0.91 1.31 1.54 1.34 1.2 1.41 1.25 0.91 1.25 0.94 0.94 0.75 -6.52 -9.42 -7.91 -3.78 -4.49 -3.72 -1.94 - - - -3.69 -1.62 0.32 -0.39 -0.33 -0.24 -3.07 -2.5 -2.98 -2.61
1.67 1.27 1.13 1.79 0.48 1.78 0.88 -0.1 1.09 1.18 1.13 1.32 - -1.51 -1.36 -2.75 -2.53 -4.93 -4.55 -4.12 - -0.88 - - - -1.4 -1.57 0.5 -3.28 -3.54 - -4.69
1.31 2.01 2.07 1.09 1.48 1.31 1.04 0.87 1.08 0.88 1.2 0.39 -7.11 -7.95 - -4.61 -5.7 -2.97 -3.7 -7.34 - -6.13 -3.92 -1.59 -1.34 -2.07 -1.96 -0.63 -3.56 -3.76 -4.06 -4.27
-0.67 0.34 1.1 0.46 0.77 0.76 0.71 -0.15 0.54 1.0 0.01 -0.33 -0.71 -1.61 -0.07 0.66 0.05 -2.19 -0.39 - -2.32 - 0.34 -0.1 -0.23 -0.48 -0.01 0.51 0.12 -0.02 -0.07 -1.01
0.38 0.71 0.63 0.62 0.44 0.62 0.48 0.45 0.7 0.72 0.52 0.49 -0.29 -0.72 -0.15 -0.29 -0.37 -1.05 -0.51 -2.46 -0.07 0.05 -0.26 -0.28 -1.41 -0.85 -0.88 -0.4 -0.53 -0.29 -0.48 -0.28
1.21 1.51 1.69 1.69 1.29 1.72 1.45 0.56 1.38 1.27 1.11 1.16 -7.95 -10.22 - -9.35 -6.98 - -7.92 -6.1 - - - -9.53 -1.57 -3.86 -2.37 -1.71 -5.9 -4.93 -6.56 -7.15
0.61 1.19 1.26 1.39 1.41 1.22 0.95 1.36 1.23 1.39 0.76 0.86 -0.85 -3.9 -3.9 -1.36 -1.98 -0.58 -2.33 -8.04 -6.9 -6.68 -0.92 -1.73 - -0.93 -1.69 -2.09 -2.06 -1.8 -1.63 -1.94
0.83 1.09 1.18 0.78 1.11 1.23 1.16 0.86 1.05 0.88 0.73 0.68 - - - -5.94 -1.37 -1.26 -1.55 - - -3.65 -2.25 -3.37 -0.08 0.0 0.94 0.86 -2.02 -1.53 -1.88 -1.81
0.84 1.19 1.28 1.05 0.97 1.29 0.86 0.62 0.93 0.62 0.67 0.35 -1.26 -2.23 -2.48 -1.45 -1.88 -2.61 -1.64 0.03 -2.64 -0.97 -1.64 -1.38 0.12 0.01 -0.2 0.09 -2.04 -1.9 -1.89 -2.02
1.03 1.73 1.61 1.52 1.51 1.61 1.75 0.35 1.35 1.18 0.81 1.0 - - - -6.42 -5.58 - - - - - - - -0.92 -3.36 -2.31 -0.65 -5.53 -3.96 -5.58 -6.64
0.49 1.17 1.58 1.37 1.23 1.32 1.27 0.85 1.61 0.58 0.9 0.61 -7.75 - - - -5.55 - -5.28 - - - - - 0.39 -0.18 0.78 0.7 -5.13 -3.4 -4.56 -4.78
0.55 0.51 0.53 0.5 0.5 0.22 0.43 0.58 0.68 0.98 0.67 0.62 -1.05 -1.07 -0.26 0.63 -0.97 -0.87 -0.46 -0.17 -0.95 -2.01 -0.54 -0.64 -1.08 -0.18 -0.23 -0.43 -0.66 -0.58 -0.22 -0.16
0.87 1.48 1.96 1.48 1.83 1.7 1.07 0.98 1.68 0.92 1.09 0.75 - - - - -7.23 -2.13 -4.91 - - - - -5.59 - -1.96 -2.29 -3.54 -7.23 -5.6 -4.89 -6.27
0.96 1.12 1.34 1.39 1.16 1.34 1.52 1.53 1.68 1.46 1.24 0.99 - - -9.04 - -1.54 -4.2 -7.85 -6.42 -6.55 - -4.92 -8.92 -5.25 -3.09 -1.35 -1.25 -2.42 -2.45 -3.86 -4.22
1.02 1.51 0.96 1.63 1.06 0.97 0.55 0.58 1.68 1.57 1.64 1.44 -2.54 -2.71 -2.45 -1.38 -4.71 -5.43 -1.01 -0.19 -2.9 - - -4.76 - -3.47 -2.09 -3.59 -3.63 -4.45 -4.49 -6.89
0.72 1.34 1.62 1.37 1.3 1.36 1.12 1.1 1.35 1.01 0.9 0.74 -8.69 - - -6.93 -5.6 -5.72 -6.8 - - - -6.75 -3.72 0.5 -0.7 0.17 0.32 -4.8 -3.51 -5.42 -5.44
1.33 2.14 1.85 1.78 0.91 1.25 0.5 0.39 0.95 1.03 1.11 1.36 - -3.39 -7.94 - -2.73 -4.19 -1.14 - - - -6.97 - -3.86 -3.63 -0.6 -0.99 -3.81 -3.82 -4.73 -4.2
1.18 1.19 1.51 0.87 0.91 1.08 0.63 1.08 0.83 0.81 0.95 0.7 - - - -3.5 -0.88 -2.05 -0.73 - 0.2 - -1.06 -1.88 -0.42 0.19 -0.83 0.23 -1.44 -1.51 -2.42 -2.9
1.05 1.22 1.34 1.26 1.18 1.15 1.11 1.35 1.12 0.81 1.27 0.9 -3.08 -0.64 -0.49 -3.12 -3.2 -2.81 -2.5 - - -3.68 -2.72 -2.9 -1.98 -0.42 -0.82 -0.23 -3.41 -2.91 -3.15 -2.92
0.58 1.3 1.45 1.23 1.17 1.45 1.37 0.8 1.36 0.82 1.11 0.47 -2.64 -3.32 -4.25 -2.18 -2.41 -1.86 -1.89 - - - -4.56 -4.08 -0.73 0.2 -0.38 0.27 -2.82 -1.67 -2.57 -3.56
1.12 1.22 1.43 1.52 1.38 1.45 1.01 0.76 1.1 1.07 1.39 1.2 -3.21 0.05 -1.11 -2.91 -3.94 -4.19 -3.73 -9.05 -6.3 - -4.35 -4.69 -5.64 -1.82 -0.77 -1.02 -3.41 -3.46 -3.78 -3.89
0.7 1.21 1.74 1.41 1.37 1.69 1.49 0.56 1.16 0.31 0.94 0.34 -2.6 -3.67 -3.07 -2.61 -2.39 -2.21 -1.91 -2.81 -1.68 -1.47 -2.41 -1.84 -1.43 -2.05 -0.85 -0.83 -2.4 -1.7 -1.63 -1.87
-0.46 0.64 1.25 0.83 1.78 1.03 0.83 1.16 1.92 1.64 0.69 -0.1 -3.39 -5.01 -7.6 -4.21 -0.98 -1.18 -1.24 - - - -1.66 -2.0 -1.05 0.11 -1.17 -1.5 -0.76 -1.33 -0.58 -0.93
0.66 1.08 1.64 1.32 0.74 1.54 1.36 1.08 1.45 0.97 0.88 0.52 -3.84 -3.34 -2.34 -3.67 -4.68 -3.63 -2.83 -1.54 -5.28 -4.43 -3.84 -3.27 0.28 -1.34 0.44 -0.07 -4.3 -4.11 -4.02 -3.85
0.84 1.13 1.28 1.18 1.03 1.31 1.19 1.31 1.67 1.18 0.95 0.89 -4.2 -0.15 -0.38 -2.91 -4.51 -5.89 - -2.37 -1.99 -1.16 -4.65 -3.57 -2.07 -1.12 -2.17 -0.24 -4.03 -4.47 - -6.34
1.16 1.27 1.64 1.64 1.24 1.71 1.47 0.88 1.73 1.15 1.3 1.02 -9.48 -11.18 -8.31 -7.7 -5.66 -7.61 -7.11 - -1.99 - -8.05 -7.37 -2.12 -5.11 -3.82 -3.19 -5.1 -4.93 -6.01 -5.41
0.61 1.01 1.62 1.25 0.79 0.61 1.08 1.47 1.16 1.6 1.22 0.63 -2.4 -1.91 -1.13 -2.27 -2.59 -4.33 -3.92 0.26 -0.3 -1.47 -3.11 -3.7 -1.55 -2.59 -0.75 -1.33 -2.95 -3.88 -5.06 -4.35
1.03 1.19 1.42 0.87 1.63 1.25 1.57 0.34 1.73 0.88 1.56 1.18 - - - -4.06 -4.23 - -4.3 - - - - - -4.52 0.14 -0.37 -0.19 -4.52 -3.75 -5.71 -5.16
0.68 1.13 1.42 1.05 1.15 1.19 1.52 0.7 1.26 0.97 1.27 0.63 -8.67 - - -4.3 -3.53 -2.77 -4.13 - - - -2.2 -3.35 -6.38 0.57 0.52 1.1 -3.12 -2.72 -2.89 -4.82
0.59 1.12 1.42 1.2 1.08 1.38 1.33 0.54 1.03 0.39 0.78 0.21 -8.61 - - -4.22 -5.83 -6.24 -4.83 - - - - -4.42 -5.78 1.0 1.16 1.98 -5.74 -4.35 -8.38 -7.44
1.2 1.71 1.76 1.51 1.12 1.65 1.27 0.67 1.47 1.01 1.31 1.1 - - - -8.8 -7.96 -7.29 - - - - - - -6.88 -4.15 -1.47 0.08 - - - -
1.24 2.0 1.98 1.28 1.2 1.15 0.27 1.03 1.49 1.4 1.26 1.47 - - - - - - - - - - - - -0.21 - - - - - - -
0.81 1.35 1.64 1.46 1.21 1.18 1.26 1.42 1.11 1.37 1.12 0.92 - - - -7.33 -3.63 -4.95 -6.47 - - - -7.1 -3.94 1.06 -1.4 -1.89 -1.94 -4.85 -3.18 -4.54 -6.5
0.91 1.41 1.68 1.58 1.33 1.54 1.32 0.65 1.23 0.97 1.03 0.87 -7.37 -10.76 -11.75 -5.69 -2.93 -2.71 -3.22 -5.81 -4.6 - -2.84 -3.0 -1.8 -0.94 -0.54 -0.55 -2.67 -2.49 -2.38 -2.54
0.69 1.24 1.54 1.22 1.25 1.32 1.59 0.62 1.3 0.59 1.18 0.59 - - -9.49 -5.7 -5.65 -6.85 -5.25 - - - - -7.91 -7.45 0.34 0.6 1.41 -5.11 -4.12 -6.19 -7.52
0.49 1.07 1.14 1.6 0.76 1.17 1.34 1.02 1.72 0.99 1.12 0.91 - - - - -3.0 -2.89 -5.41 - - - - - 0.06 -0.18 0.26 0.42 -3.73 -2.01 -2.28 -2.81
0.09 0.3 0.5 0.37 0.64 0.71 0.83 0.8 0.59 0.61 0.37 0.26 -0.01 -0.56 -0.09 -0.4 -0.66 -1.08 -0.79 -1.15 -0.02 0.18 -0.06 -0.21 -1.37 -0.86 -0.31 -0.47 -0.62 -0.65 -0.42 -0.33

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.