Heatmap: Cluster_340 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
0.25 -0.31 -0.28 0.25 0.71 0.56 -0.19 0.13 0.01 0.71 -0.4 -0.27 0.79 1.51 0.46 1.06 -1.85 -0.77 0.09 - -2.14 - -0.62 -0.03 -0.07 -0.09 0.3 0.83 -0.81 -0.85 -1.36 -1.18
0.35 -0.0 0.21 0.04 0.17 -0.24 -0.06 0.05 0.17 0.11 0.41 0.33 0.49 1.3 0.27 0.32 -1.0 -0.33 -0.19 -4.03 -0.45 -2.61 -0.36 -0.0 -0.38 0.61 0.74 0.46 -0.78 -0.86 -0.96 -0.79

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.