Heatmap: Cluster_148 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00001p00273030 (evm_27.TU.AmTr_v1.0_scaffold00001.587)
- - - - 3.11 - - - - - 3.52 - -0.27 - 0.08 - - - - - - -
AMTR_s00002p00011760 (evm_27.TU.AmTr_v1.0_scaffold00002.2)
- - - - 2.39 - - - - - 1.46 2.22 1.19 -2.21 - - 0.23 - - - - 2.51
AMTR_s00003p00116780 (evm_27.TU.AmTr_v1.0_scaffold00003.81)
0.99 - - - -1.19 - -1.75 - -0.82 -2.57 0.0 1.36 1.57 -0.42 -0.97 - 0.25 -0.42 -1.39 1.41 2.23 0.09
AMTR_s00003p00271470 (evm_27.TU.AmTr_v1.0_scaffold00003.459)
- - - - -0.31 - - - - -1.45 - - 2.54 -1.6 -0.41 - - - - - 3.66 0.34
AMTR_s00004p00269080 (evm_27.TU.AmTr_v1.0_scaffold00004.274)
- - - - 2.74 - - - - - 2.39 - 2.81 0.56 - - - - - 0.67 - -
AMTR_s00004p00270770 (evm_27.TU.AmTr_v1.0_scaffold00004.300)
- - - - 2.57 - 0.62 - 0.74 0.73 1.45 - 0.83 0.34 -0.18 - -1.66 - - 1.13 -0.87 0.57
AMTR_s00006p00023520 (evm_27.TU.AmTr_v1.0_scaffold00006.5)
- - - - 0.96 - -2.2 - -0.63 -1.33 - 1.28 2.44 -5.07 -0.66 0.71 1.26 - - -0.38 2.25 -0.47
AMTR_s00006p00179450 (evm_27.TU.AmTr_v1.0_scaffold00006.70)
- - - - 3.4 - - - - -0.79 0.85 - -0.66 -1.15 1.62 - - - - - 2.29 -
AMTR_s00006p00259600 (evm_27.TU.AmTr_v1.0_scaffold00006.218)
- - - - -2.68 - - - - - - 2.68 -0.75 -1.9 0.5 - 2.18 - - -0.54 2.91 -1.17
AMTR_s00007p00259180 (evm_27.TU.AmTr_v1.0_scaffold00007.316)
1.5 - - 0.12 -0.21 - -3.82 - -1.61 -2.07 0.27 -0.24 1.98 -0.12 0.73 - -0.26 - - -0.93 2.58 -0.58
AMTR_s00007p00268010 (evm_27.TU.AmTr_v1.0_scaffold00007.386)
-2.89 - - -3.39 -0.48 - 1.0 - 1.48 0.84 1.22 - -0.42 0.25 -0.85 - 0.94 0.5 1.26 -0.06 0.35 0.74
AMTR_s00008p00179550 (evm_27.TU.AmTr_v1.0_scaffold00008.98)
- - - - 3.43 - - - - - 3.02 - - - - - - - - - - 1.62
AMTR_s00011p00214630 (evm_27.TU.AmTr_v1.0_scaffold00011.88)
- - - - 0.21 - - - -0.29 - 1.05 3.15 0.56 - - - 0.95 - - - 2.51 -
AMTR_s00012p00056490 (evm_27.TU.AmTr_v1.0_scaffold00012.20)
- - - - 3.11 - - - - -0.79 2.67 - -0.14 -0.08 2.19 - - - - - - -
AMTR_s00014p00091300 (evm_27.TU.AmTr_v1.0_scaffold00014.30)
- - - - - - - - -2.7 - 2.37 - -0.39 -1.82 -0.25 - - - - -0.3 3.8 -
AMTR_s00014p00258050 (evm_27.TU.AmTr_v1.0_scaffold00014.152)
- - - -0.43 2.16 - -0.67 - -1.61 -0.43 3.1 - -0.39 - - - - - 2.22 - - 0.18
AMTR_s00015p00228420 (evm_27.TU.AmTr_v1.0_scaffold00015.79)
- - - -1.89 2.09 - -0.24 - -0.62 -0.0 1.81 1.72 -2.34 -1.39 -0.58 - 1.34 - -0.3 0.44 0.71 -0.74
AMTR_s00016p00058360 (evm_27.TU.AmTr_v1.0_scaffold00016.25)
- - - - 3.92 - - - - - 2.77 - - - - - - - - - - -
AMTR_s00016p00260610 (evm_27.TU.AmTr_v1.0_scaffold00016.382)
2.01 - - 1.08 0.5 - - - - -3.01 0.64 - 1.74 -3.22 -1.16 - -0.6 - -12.21 -0.42 2.62 0.39
AMTR_s00017p00213920 (evm_27.TU.AmTr_v1.0_scaffold00017.139)
- - - - 3.45 - - - - 0.23 2.91 - - - 1.25 - - - - - - -
AMTR_s00021p00248540 (evm_27.TU.AmTr_v1.0_scaffold00021.275)
- - - - 3.3 - - - -1.79 0.75 3.34 - - -3.17 - - - - - - - -
AMTR_s00024p00057560 (evm_27.TU.AmTr_v1.0_scaffold00024.22)
- - - - 1.25 - - - -2.1 -2.62 1.67 0.1 1.11 0.07 -0.35 - -1.4 0.91 1.27 0.33 2.07 -0.22
AMTR_s00026p00151330 (evm_27.TU.AmTr_v1.0_scaffold00026.74)
- - - 0.38 3.09 - 0.25 - 1.13 -1.8 1.72 - -0.31 -0.57 1.62 - - - - - - -0.54
AMTR_s00030p00089450 (evm_27.TU.AmTr_v1.0_scaffold00030.36)
- - - - 2.72 - - - - -0.93 3.2 - -0.28 -0.21 1.99 - - - - - - -
AMTR_s00031p00215140 (evm_27.TU.AmTr_v1.0_scaffold00031.106)
- - - - 2.05 - - - - - - - -1.23 - 1.42 - 1.55 - - 0.8 3.34 -
AMTR_s00032p00171360 (evm_27.TU.AmTr_v1.0_scaffold00032.143)
- - - - 4.1 - - - - - 2.04 - - -1.96 - - - - - -1.13 - -
AMTR_s00033p00217360 (evm_27.TU.AmTr_v1.0_scaffold00033.193)
- - 0.85 - 2.03 - - - - - 2.01 - - - - - - - - 0.3 3.44 -
AMTR_s00033p00244230 (evm_27.TU.AmTr_v1.0_scaffold00033.269)
- - - - 2.46 - - - - - - - 0.3 -0.08 1.8 - - - - 2.08 - 2.72
AMTR_s00034p00240950 (evm_27.TU.AmTr_v1.0_scaffold00034.129)
- - - - 3.54 - -0.79 - - 1.73 1.86 - - 0.06 0.06 - - - - -0.33 - -
AMTR_s00036p00211050 (evm_27.TU.AmTr_v1.0_scaffold00036.132)
- - -1.02 - 1.09 - - - -1.27 -0.25 0.6 - -1.16 -0.31 -3.47 0.82 -0.76 - 1.21 0.28 3.18 -1.62
AMTR_s00041p00091400 (evm_27.TU.AmTr_v1.0_scaffold00041.58)
- - - - 2.89 - - - -1.05 - 3.57 - -0.59 - -0.89 - - - - 0.08 - -
AMTR_s00043p00045130 (evm_27.TU.AmTr_v1.0_scaffold00043.8)
- - - - -2.78 - 1.62 - 1.12 0.21 1.74 2.53 -1.31 0.98 -2.5 - - - - - - 1.92
AMTR_s00044p00135770 (evm_27.TU.AmTr_v1.0_scaffold00044.125)
- - - - 2.15 - - - -2.59 - 0.03 1.77 -1.74 -2.67 0.69 - 0.79 1.58 - - - 2.63
AMTR_s00046p00094180 (evm_27.TU.AmTr_v1.0_scaffold00046.52)
- - - - 0.49 - -2.05 - -2.27 -1.54 -0.23 1.65 1.66 0.19 -1.61 - 1.59 - 1.48 - 2.3 -1.1
AMTR_s00046p00166080 (evm_27.TU.AmTr_v1.0_scaffold00046.88)
- - - - -0.43 - -1.79 - -0.84 -0.58 - 1.88 0.95 -0.37 0.15 - 1.82 - - 0.58 2.53 0.56
AMTR_s00047p00096140 (evm_27.TU.AmTr_v1.0_scaffold00047.38)
- - - - -0.05 - -5.63 - -2.02 -2.78 0.72 1.41 -0.87 -1.0 -1.57 - 2.03 1.21 -1.09 -2.1 2.82 -0.38
AMTR_s00049p00012970 (evm_27.TU.AmTr_v1.0_scaffold00049.3)
- - - - 2.62 - -1.78 - -0.98 -0.74 2.79 - -0.62 -3.4 -1.25 0.76 - - - -1.2 1.98 -1.56
AMTR_s00050p00191240 (evm_27.TU.AmTr_v1.0_scaffold00050.55)
- - - - 0.32 - - - - - 1.3 - -0.73 -0.56 0.87 - 0.94 - - - 3.73 -
AMTR_s00050p00220790 (evm_27.TU.AmTr_v1.0_scaffold00050.86)
- - - - 3.49 - -0.59 - -0.45 - 2.57 - - -0.51 1.44 - - - - - - -
AMTR_s00050p00226750 (evm_27.TU.AmTr_v1.0_scaffold00050.99)
- - - - 0.21 - 0.23 - -1.03 -0.36 0.43 - 1.57 0.52 0.39 - 1.23 - - 0.15 2.86 -0.65
AMTR_s00053p00206200 (evm_27.TU.AmTr_v1.0_scaffold00053.157)
- - - - 3.52 - - - -1.33 -2.07 1.64 1.51 -1.77 0.22 -1.55 0.95 - - - -2.47 - -
AMTR_s00056p00028730 (evm_27.TU.AmTr_v1.0_scaffold00056.14)
- - - - - - 2.82 - -0.77 0.65 2.83 - 0.05 0.47 - - - - - 1.72 - -
AMTR_s00056p00190120 (evm_27.TU.AmTr_v1.0_scaffold00056.175)
- - - - 2.73 - -1.69 - -1.27 -0.46 2.19 0.33 0.85 -2.55 -0.32 -0.23 -0.17 1.14 -0.84 -1.49 - -1.13
AMTR_s00057p00034960 (evm_27.TU.AmTr_v1.0_scaffold00057.13)
- - - - - - 0.31 - - - - - - - 1.54 - 1.88 - - 0.57 3.67 -
AMTR_s00057p00198180 (evm_27.TU.AmTr_v1.0_scaffold00057.227)
- - - - 3.39 - -2.2 - -3.13 -1.72 2.31 1.38 -0.05 -1.11 0.38 - - - - -1.29 - -2.33
AMTR_s00060p00126750 (evm_27.TU.AmTr_v1.0_scaffold00060.65)
- - - - 2.2 - - - -0.61 - 2.43 - -0.27 0.35 2.12 - 1.32 - - 1.26 - -
AMTR_s00062p00088000 (evm_27.TU.AmTr_v1.0_scaffold00062.57)
- - - - 1.51 - 2.05 - 1.2 1.29 2.24 - 0.92 0.39 -1.27 - - - - - - 0.92
AMTR_s00062p00091630 (evm_27.TU.AmTr_v1.0_scaffold00062.63)
0.05 - - - 1.97 - -1.38 - -1.02 -0.86 1.44 1.21 0.16 -2.52 0.55 - - 1.04 - -1.52 - 2.45
AMTR_s00062p00138120 (evm_27.TU.AmTr_v1.0_scaffold00062.123)
- - - - 3.62 - - - - - 2.32 - - - -0.88 - - - - - - 2.05
AMTR_s00064p00154150 (evm_27.TU.AmTr_v1.0_scaffold00064.63)
- - - - 1.12 - - - - - - - -0.55 - -1.36 - 2.72 - - -0.34 3.51 -
AMTR_s00070p00032880 (evm_27.TU.AmTr_v1.0_scaffold00070.9)
- - - - -1.03 - - - -0.85 -0.09 - - 0.72 0.4 1.27 - 2.1 - - -0.05 2.81 1.23
AMTR_s00073p00146090 (evm_27.TU.AmTr_v1.0_scaffold00073.37)
- - - - 2.74 - -0.6 - -0.76 0.01 0.83 2.61 - - -2.59 - 2.06 - - - - -0.26
- - - - 1.88 - - - - - - - -2.69 - -3.02 - - - 0.84 1.85 3.66 -
AMTR_s00080p00079830 (evm_27.TU.AmTr_v1.0_scaffold00080.25)
- - - - 3.52 - - - - 0.3 3.05 - - -0.02 - - - - - - - -
AMTR_s00080p00096310 (evm_27.TU.AmTr_v1.0_scaffold00080.35)
- - - - 0.96 - -3.26 - - -3.54 1.38 1.54 1.71 - -0.28 - 1.83 - - 1.1 2.19 -
AMTR_s00082p00137060 (evm_27.TU.AmTr_v1.0_scaffold00082.33)
- - - 0.46 -4.72 - - - -3.97 - 1.91 0.71 0.1 -1.64 -4.27 -0.85 0.52 0.52 -1.46 - 3.17 -0.18
AMTR_s00086p00037750 (evm_27.TU.AmTr_v1.0_scaffold00086.15)
- - - - 3.31 - - - - - 3.59 - - - - - - - - - - -
AMTR_s00086p00144610 (evm_27.TU.AmTr_v1.0_scaffold00086.84)
- - - - 1.43 - -0.17 - -1.88 -0.27 0.55 2.32 -0.19 -2.75 -0.07 - 1.32 0.13 - -1.28 - 2.28
AMTR_s00088p00120260 (evm_27.TU.AmTr_v1.0_scaffold00088.85)
-8.66 -9.4 - 1.58 2.67 - -25.68 - - - 1.78 - 1.15 -1.38 -0.81 - 2.15 - - -10.03 0.63 -19.27
- - - - 3.63 - - - - - 3.0 - - - -1.21 - - - - - - 0.21
AMTR_s00090p00147630 (evm_27.TU.AmTr_v1.0_scaffold00090.81)
- - - 1.8 2.69 - -1.96 - -1.06 -1.74 2.07 - -1.92 - 0.87 - - - - 1.39 - 1.07
AMTR_s00090p00174240 (evm_27.TU.AmTr_v1.0_scaffold00090.106)
- - - - 3.5 - -0.67 - -3.37 - 3.12 - - - 0.38 - - - - - - -
AMTR_s00096p00097880 (evm_27.TU.AmTr_v1.0_scaffold00096.46)
- - - - 2.25 - -2.08 - -2.04 0.51 0.88 - 0.9 -0.22 1.09 - 1.64 - - -1.6 - 2.37
AMTR_s00096p00169300 (evm_27.TU.AmTr_v1.0_scaffold00096.114)
- - - - 2.93 - - - - 2.06 3.23 - - -0.17 - - - - - - - -
AMTR_s00098p00028470 (evm_27.TU.AmTr_v1.0_scaffold00098.3)
- - - - -0.2 - - - -2.11 -3.1 -0.06 1.72 -1.06 -1.06 -0.78 - -0.42 1.53 - 0.04 3.37 -
AMTR_s00098p00121330 (evm_27.TU.AmTr_v1.0_scaffold00098.32)
- - - - - - - - -1.41 -0.57 1.51 - 1.91 1.46 1.63 - - - - -0.29 2.94 -
AMTR_s00101p00058510 (evm_27.TU.AmTr_v1.0_scaffold00101.30)
- - - - 2.97 - - - - - 2.02 - 1.14 - - - - - - - - 2.98
- - - 1.05 0.81 - - - - - 1.98 -3.91 - - -1.26 - - - - 0.12 3.66 -
AMTR_s00102p00123170 (evm_27.TU.AmTr_v1.0_scaffold00102.71)
- - - - 3.02 - - - - - 2.49 - - 1.93 2.16 - - - - - - -
AMTR_s00106p00119040 (evm_27.TU.AmTr_v1.0_scaffold00106.90)
- - - - 0.55 - -2.67 - -2.43 - 2.29 - 2.33 -0.28 -0.19 - - - - 1.82 2.14 -0.74
AMTR_s00112p00048590 (evm_27.TU.AmTr_v1.0_scaffold00112.12)
- - - - 3.22 - -3.35 - -2.54 -1.84 1.79 - 0.38 -2.56 -0.07 - -0.9 - - -1.94 2.32 -1.06
AMTR_s00121p00130060 (evm_27.TU.AmTr_v1.0_scaffold00121.37)
- - - - 1.93 - - - -1.86 -2.77 0.17 - 0.03 -2.3 -0.09 - 2.17 - 0.6 0.31 2.61 0.19
AMTR_s00131p00020490 (evm_27.TU.AmTr_v1.0_scaffold00131.3)
- - - -0.41 -1.16 - -2.06 - -0.65 -3.05 0.81 1.6 0.18 -1.29 -0.95 - - - - -1.99 3.57 -0.27
AMTR_s00137p00056870 (evm_27.TU.AmTr_v1.0_scaffold00137.22)
- - - - 1.89 - - - 0.9 1.13 - - 1.49 -0.12 - - - - 1.44 1.26 2.44 -
AMTR_s00142p00106070 (evm_27.TU.AmTr_v1.0_scaffold00142.70)
- - - - 2.8 - - - - - 2.15 - -0.0 - 1.15 2.46 0.89 - - - - -
AMTR_s00143p00108380 (evm_27.TU.AmTr_v1.0_scaffold00143.29)
- - - - 0.19 - - - - - - - - - -1.73 - 2.91 - - - 3.7 -
AMTR_s00145p00026210 (evm_27.TU.AmTr_v1.0_scaffold00145.6)
-1.85 -1.21 - -5.01 1.94 - -3.12 0.22 -2.11 -2.87 2.33 -0.78 -1.55 -1.33 -2.41 - 1.42 0.03 -1.13 -0.38 1.99 -1.58
AMTR_s00145p00034190 (evm_27.TU.AmTr_v1.0_scaffold00145.9)
- - - -3.88 2.19 - -4.77 - -2.46 -2.23 2.72 0.25 -0.51 -0.93 -0.71 - 0.53 0.06 -1.92 -1.39 1.91 -1.1
AMTR_s00148p00095340 (evm_27.TU.AmTr_v1.0_scaffold00148.65)
- - - - 0.53 - - - -1.31 -1.18 0.96 - 0.74 -0.76 1.54 - -0.24 - - -1.83 3.4 -0.12
AMTR_s00160p00035040 (evm_27.TU.AmTr_v1.0_scaffold00160.7)
- - - - 3.51 - - - - - 2.57 - - - - - 2.22 - - - - -
AMTR_s00162p00044560 (evm_27.TU.AmTr_v1.0_scaffold00162.18)
- - - - -0.01 - - - - - 1.57 - 0.17 - -1.73 - - - - -0.65 4.0 -
AMTR_s00173p00057550 (evm_27.TU.AmTr_v1.0_scaffold00173.12)
- - - - -0.12 - -3.75 - -1.16 -0.88 1.44 1.54 -0.12 -0.46 0.06 0.22 - 0.6 0.62 - 2.91 -
AMTR_s00175p00056760 (evm_27.TU.AmTr_v1.0_scaffold00175.28)
- - - - 1.51 - -3.99 - -1.78 -2.84 1.91 - -0.84 -0.57 -0.57 0.36 0.48 0.74 1.16 -1.64 2.58 -3.19
AMTR_s00186p00028360 (evm_27.TU.AmTr_v1.0_scaffold00186.9)
- - - - 1.75 - - - - - - - -0.68 - - - 2.72 - - - 3.51 -
AMTR_s00206p00032630 (evm_27.TU.AmTr_v1.0_scaffold00206.6)
- - - - 2.66 - - - - - 2.54 - -1.6 - -0.02 - - - 1.63 - 2.45 -
AMTR_s00244p00011780 (evm_27.TU.AmTr_v1.0_scaffold00244.1)
-0.81 -2.24 -0.9 - 0.36 - -2.86 - -4.83 -3.12 0.22 -0.36 2.13 -2.89 -3.09 0.08 1.52 1.04 1.58 -1.33 1.61 -3.1
AMTR_s04525p00001750 (evm_27.TU.AmTr_v1.0_scaffold04525.1)
1.56 - - - 1.5 - - - -0.66 0.12 0.49 - 0.18 - -2.52 - 1.38 - 1.59 0.21 2.2 -1.28

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.