1. Home
  2. Tools
  3. Expression Heatmap
  4. Results

Heatmap: Cluster_179 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

 Transpose table  Download table
Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
0.54 0.39 0.43 0.4 0.35 0.31 0.39 0.52 0.46 0.63 0.45 0.53 0.03 -0.23 -0.68 0.08 -0.31 -0.87 0.28 -8.88 -6.26 -8.55 0.09 -0.04 -4.0 -0.07 -0.18 -0.03 0.27 0.3 0.09 0.01
0.23 0.38 0.42 0.39 0.5 0.63 0.68 0.66 0.63 0.75 0.39 0.26 -0.67 -0.66 -0.34 -0.47 -0.46 -1.05 -0.47 -1.19 -0.47 -1.32 -0.41 -0.29 -0.96 -0.19 0.53 0.68 -0.36 -0.19 -0.91 -0.95
0.27 0.44 0.75 0.59 0.66 0.83 0.88 0.94 0.76 0.86 0.82 0.57 -0.71 -0.27 -0.16 -0.66 -0.45 -2.2 -0.59 -4.8 -2.06 -0.93 -0.46 -0.46 -2.96 -0.2 -0.1 0.18 -0.33 -0.33 -1.23 -1.12
0.76 0.78 0.44 0.62 0.54 0.62 0.47 0.37 0.46 0.65 0.39 0.52 0.13 -0.44 0.23 0.2 -0.38 -0.17 0.17 -3.11 -4.04 -2.74 -0.52 -0.62 -3.34 -0.61 -0.36 -0.3 -0.33 -0.1 -0.19 -0.38
0.6 0.54 0.36 0.64 0.28 0.67 0.71 0.76 0.99 0.94 0.52 0.74 -0.89 -0.2 -0.2 -0.38 -0.09 -0.47 -0.23 -5.61 -2.45 -2.25 -0.8 -0.81 -1.81 -0.48 -0.11 0.17 -0.14 -0.12 -0.92 -0.94
0.14 0.31 0.4 0.37 0.32 0.21 0.29 0.53 0.45 0.53 0.5 0.35 0.91 0.03 -0.79 0.54 -0.39 -0.67 0.06 -3.0 -2.58 -3.29 0.21 0.48 -1.76 0.45 -0.55 -0.41 -0.22 -0.16 -0.56 -0.68
0.6 0.51 0.68 0.52 0.48 0.53 0.46 0.43 0.51 0.77 0.7 0.62 -0.05 -1.08 -0.73 0.14 0.04 -0.53 0.07 -2.77 -7.0 -1.99 -0.09 -0.23 -4.8 -0.6 -0.7 -0.75 0.16 0.3 -0.18 -0.13
0.67 0.4 0.35 0.32 0.27 0.17 0.18 0.34 0.35 0.46 0.47 0.4 0.12 0.32 -0.39 0.44 -0.53 -1.45 0.3 -5.24 -4.07 -3.55 -0.07 0.06 -2.33 0.38 0.16 0.25 0.01 0.12 -0.21 -0.29
0.38 0.52 0.56 0.45 0.37 0.54 0.39 0.29 0.4 0.36 0.27 0.15 0.01 -0.12 -0.04 0.0 -0.29 -0.38 -0.22 -2.29 -1.93 -3.81 -0.02 -0.1 -1.19 -0.36 0.13 0.32 -0.06 0.14 -0.16 -0.12
0.35 0.35 0.49 0.46 0.55 0.48 0.6 0.49 0.51 0.59 0.43 0.41 -0.13 -0.43 0.13 -0.0 -0.41 -0.52 0.12 -3.4 -1.89 -3.66 -0.45 -0.55 -2.11 0.2 0.17 0.29 -0.37 -0.24 -0.16 -0.17
0.48 0.54 0.43 0.33 0.39 0.41 0.37 0.36 0.32 0.53 0.39 0.41 0.15 -0.31 -0.16 0.42 -0.46 -0.51 0.21 -0.92 -2.8 -1.93 -0.32 -0.33 -2.18 0.11 -0.09 0.05 -0.21 -0.09 -0.35 -0.21
0.4 0.51 0.42 0.52 0.49 0.65 0.48 0.34 0.5 0.48 0.31 0.47 -0.51 -0.13 -0.35 -0.39 0.14 0.21 -0.26 -2.83 -1.47 -2.48 0.23 0.26 -1.29 -1.0 -0.21 -0.11 -0.11 -0.09 -0.36 -0.42
0.54 0.46 0.52 0.41 0.49 0.49 0.55 0.59 0.79 0.91 0.67 0.52 -0.34 -1.1 -1.75 -0.29 -0.14 -0.74 -0.02 - -6.71 - 0.16 -0.01 -6.75 0.15 -0.44 -0.26 0.34 0.31 0.04 -0.31
0.31 0.38 0.37 0.3 0.38 0.48 0.41 0.32 0.33 0.43 0.29 0.17 -0.24 -0.29 0.07 0.02 -0.55 -0.74 0.04 -1.1 -1.1 -2.46 -0.24 -0.29 -1.3 0.12 0.62 0.66 -0.38 -0.35 -0.19 -0.21
0.63 0.45 0.42 0.31 0.38 0.12 0.24 0.23 0.22 0.35 0.37 0.35 -0.03 0.17 -0.77 0.35 -0.45 -0.73 0.3 -7.15 -6.26 -6.95 -0.39 -0.38 -3.58 0.87 0.5 0.48 -0.13 -0.11 0.16 0.01
0.38 0.46 0.56 0.44 0.52 0.45 0.66 0.66 0.76 0.83 0.7 0.57 -0.32 -0.56 -0.7 -0.13 -0.08 -0.27 0.15 -4.12 -2.91 -4.67 0.06 0.13 -4.39 -0.18 -0.58 -0.39 -0.01 0.04 -0.67 -0.56
0.59 0.9 1.06 0.93 0.48 0.39 0.63 0.4 0.52 0.66 0.53 0.59 -0.55 0.12 -0.07 -0.21 -0.32 -0.52 -0.98 - - - -0.06 -0.19 - -0.77 -1.24 -1.08 0.02 0.11 0.2 -0.1
-0.07 0.58 0.4 0.2 0.3 0.31 0.24 0.27 0.22 0.31 0.29 0.15 0.55 -0.12 -0.66 0.51 -0.57 -0.64 0.29 -2.26 -1.52 -3.8 0.19 0.37 -0.99 0.9 -0.08 0.15 -0.28 -0.1 -0.58 -0.71
-0.05 0.61 0.74 0.61 0.44 0.32 0.67 0.36 0.7 0.64 0.61 0.34 0.21 0.05 -0.26 0.51 -0.58 -0.81 -0.16 -3.86 -4.37 -6.58 -0.56 -0.74 -4.13 0.2 -0.62 -0.58 -0.02 0.18 0.15 0.1
0.49 0.61 0.5 0.34 0.25 0.61 0.21 0.3 0.14 0.29 0.11 0.01 0.1 -0.45 -0.02 0.2 -0.22 0.06 0.38 -1.01 -3.85 -3.62 -0.03 -0.08 -0.83 -0.3 0.2 0.24 -0.19 -0.03 -0.36 -0.31
0.57 0.59 0.72 0.73 1.03 0.63 0.82 0.69 0.66 0.79 0.67 0.57 -0.48 -1.78 -1.13 -0.13 0.2 -0.63 0.01 - -5.82 - -0.25 -0.8 - -0.84 -0.61 -0.63 0.15 -0.0 -0.08 -0.23
0.41 0.82 0.93 0.75 0.51 0.39 0.59 0.42 0.3 0.4 0.58 0.64 -0.95 -0.27 -0.82 -0.8 -0.02 -0.35 -0.77 -3.78 -2.05 -4.42 -0.43 -0.43 -1.56 -0.42 0.29 0.14 -0.48 -0.75 0.42 0.48
0.07 0.21 0.41 0.36 0.36 0.3 0.33 0.42 0.44 0.39 0.29 0.09 0.81 -0.11 -0.57 0.44 -0.92 -1.08 -0.04 -3.77 -4.05 -4.38 0.61 0.33 -3.21 1.02 0.22 0.14 -0.49 -0.46 -0.51 -0.11
0.55 0.64 0.86 0.72 0.6 0.73 0.59 0.67 0.56 0.6 0.43 0.32 -0.56 -0.01 -2.64 0.32 0.1 0.2 -0.69 - -4.01 - -0.51 -0.91 -3.73 -0.48 -0.51 -0.5 0.3 0.31 -0.05 -0.32
0.56 0.59 0.42 0.46 0.44 0.19 0.26 0.29 0.25 0.16 0.22 0.09 0.04 -0.24 -0.07 0.42 -0.39 -1.35 0.46 -2.69 -2.05 -3.48 -0.29 -0.41 -3.23 0.5 0.36 0.64 0.04 0.1 -0.11 -0.52
0.44 0.1 -0.01 0.21 0.39 0.2 0.1 0.46 0.48 0.57 0.44 0.31 0.84 0.02 -0.51 1.08 -0.54 -1.18 0.44 -3.27 -3.75 -5.57 -0.1 0.1 -2.15 0.14 -0.24 -0.4 -0.14 -0.08 0.0 -0.08
0.73 0.34 0.22 0.13 0.24 0.36 0.3 0.28 0.54 0.58 0.44 0.4 -0.17 -0.23 0.52 0.36 -0.67 -0.28 0.32 -2.84 -1.63 -2.49 -0.27 -0.36 -2.24 -0.16 -0.16 -0.18 -0.08 -0.03 -0.03 0.11
0.49 0.47 0.53 0.51 0.73 0.54 0.59 0.69 0.65 0.79 0.68 0.45 0.19 -0.44 -0.55 -0.08 -0.48 -0.44 -0.22 -3.05 -2.35 -2.58 -0.41 -0.62 -3.49 -0.3 -0.38 -0.37 -0.11 -0.02 -0.18 -0.18
0.41 0.4 0.55 0.48 0.56 0.47 0.67 0.62 0.65 0.71 0.6 0.42 -0.5 -0.33 -0.39 -0.19 0.08 -0.31 -0.39 -2.52 -2.17 -3.03 -0.34 -0.46 -2.11 -0.17 -0.4 -0.03 0.07 0.17 -0.38 -0.27
0.74 0.37 0.39 0.27 0.33 0.29 0.53 0.28 0.43 0.56 0.5 0.68 0.57 -0.35 -0.25 0.03 -0.14 -0.31 0.18 -7.82 - - -0.06 -0.18 -2.36 -0.29 -0.29 -0.18 0.14 0.17 -0.3 -0.04
0.2 0.19 -0.07 0.29 0.31 0.33 0.28 0.42 0.69 0.53 0.62 0.36 0.9 0.33 -0.49 0.98 -0.88 -1.92 -0.03 -2.18 -2.67 - 0.07 0.38 -4.46 0.3 -0.17 0.25 -0.25 -0.15 -0.82 -0.68
0.19 0.18 0.12 0.22 0.23 0.15 0.2 0.38 0.31 0.43 0.38 0.31 0.5 0.28 -0.53 0.73 -0.47 -1.37 -0.01 -1.67 -1.54 -2.16 -0.17 0.03 -0.23 0.36 -0.01 0.04 -0.14 -0.14 -0.08 -0.28
0.62 0.68 0.7 0.68 0.68 0.64 0.84 0.45 0.58 0.66 0.48 0.51 -0.75 -0.22 -0.65 -0.66 0.16 -0.51 -0.4 -8.68 -4.21 -4.69 -0.32 -0.49 -3.74 -0.62 -0.11 0.09 -0.08 -0.04 0.03 -0.21
0.31 0.08 0.33 0.25 0.42 0.46 0.85 0.71 0.72 0.67 0.74 0.28 -0.64 0.14 -0.54 0.31 -0.81 -0.64 0.02 -4.26 -1.76 -5.25 -0.23 -0.31 -1.17 -0.4 -0.03 -0.06 0.05 0.1 -0.04 -0.3
0.44 0.53 0.45 0.46 0.76 0.79 0.59 0.48 0.65 0.48 0.43 0.28 -0.39 -0.88 -0.02 -0.19 0.15 -0.05 0.41 -1.16 -2.04 -1.84 -0.51 -0.47 -3.01 -0.5 -0.21 -0.32 -0.1 -0.1 -0.44 -0.89
0.1 0.48 0.37 0.46 0.34 0.32 0.12 0.27 0.48 0.21 0.32 0.05 0.77 0.63 -0.37 0.87 -0.63 -1.06 0.38 -9.05 -3.73 - 0.06 0.07 -1.79 0.44 0.06 0.14 -0.52 -0.43 -0.4 -0.39
0.25 0.61 0.28 0.38 0.25 0.25 0.35 0.27 0.31 0.22 0.27 0.14 0.02 -0.42 0.35 0.42 -0.02 -0.04 -0.1 -1.3 -1.96 -2.58 0.01 -0.23 -1.93 -0.53 -0.06 -0.17 0.13 0.26 0.0 0.21
0.45 0.26 0.42 0.5 0.48 0.53 0.67 0.51 0.67 0.71 0.44 0.48 -0.17 -0.99 -1.03 -0.36 -0.21 -0.83 0.33 - -7.12 - 0.02 -0.55 -4.14 -0.4 -0.15 -0.17 0.28 0.37 0.44 0.41
0.6 0.54 0.73 0.76 0.8 0.93 0.64 0.19 0.46 0.52 0.55 0.34 0.1 -1.42 -1.06 0.17 0.15 -0.5 -0.2 -1.28 -2.32 -0.98 -0.14 -0.11 -2.61 -1.05 -0.55 -0.54 -0.15 0.09 -0.86 -0.79
0.3 0.41 0.36 0.66 0.4 0.32 0.46 0.51 0.61 0.77 0.38 0.45 -0.16 -0.41 -0.34 0.16 -0.2 -0.28 -0.06 -4.91 -1.17 -3.33 0.06 -0.02 -2.02 -0.37 -0.9 -0.59 0.15 0.02 0.0 0.2
0.64 0.34 0.29 0.23 0.1 0.05 0.08 0.44 0.73 0.8 0.69 0.62 0.41 0.03 -0.6 0.29 -0.38 -0.68 0.04 -3.69 -4.16 -4.86 -0.03 0.06 -5.54 -0.18 -0.52 -0.44 0.27 0.35 -0.02 0.1
0.19 0.77 0.5 0.63 0.5 0.63 0.51 0.5 0.65 0.84 0.53 0.33 -0.04 -0.62 0.36 0.06 -0.3 -1.17 -0.13 - - - -0.19 -0.19 -4.36 -0.76 -0.11 -0.27 -0.38 0.0 0.16 0.25
0.25 0.59 0.58 0.4 0.34 0.39 0.55 0.43 0.46 0.55 0.44 0.35 -0.26 -0.07 0.11 -0.15 -0.26 -0.56 -0.43 -2.61 -0.97 -2.44 -0.08 -0.14 -0.87 -0.1 0.07 0.23 -0.32 -0.19 -0.37 -0.39
0.48 0.33 0.52 0.41 0.48 0.52 0.16 0.36 0.59 0.57 0.44 0.22 -0.0 -0.54 0.19 -0.19 -0.35 -0.35 -0.02 -1.72 -1.52 -1.4 -0.22 -0.16 -1.64 -0.44 -0.09 0.18 -0.31 -0.15 -0.03 -0.04
0.74 0.33 0.25 0.24 0.4 0.33 0.45 0.28 0.54 0.66 0.39 0.47 -0.45 -0.7 0.37 -0.3 -0.02 -0.27 0.18 -2.87 -2.74 -2.59 -0.06 -0.21 -1.7 -0.42 -0.02 -0.02 0.06 -0.06 0.07 0.1
0.45 0.57 -0.53 0.57 0.45 0.13 0.6 0.46 0.39 0.32 0.37 0.08 0.41 -0.49 0.02 0.31 -0.2 0.33 0.25 - - - -0.09 -0.27 - -0.11 0.15 0.04 0.25 0.3 -0.08 -0.14
0.45 0.47 0.27 0.41 0.54 0.35 0.44 0.46 0.61 0.61 0.5 0.48 0.05 -0.33 0.17 0.11 -0.16 -0.5 0.22 -3.01 -3.7 -4.19 -0.14 -0.23 -2.73 -0.53 -0.18 -0.12 -0.04 0.01 -0.08 -0.01
0.4 0.32 0.22 0.31 0.31 0.4 0.28 0.31 0.26 0.37 0.29 0.1 -0.07 -0.24 0.17 0.1 -0.46 -0.05 0.21 -1.55 -1.1 -1.42 -0.1 -0.0 -1.27 -0.0 0.22 0.2 -0.36 -0.18 -0.14 -0.03
0.6 0.53 0.4 0.47 0.67 0.67 0.72 0.69 0.69 0.8 0.59 0.52 -0.44 -0.84 -0.02 -0.4 -0.63 -0.35 -0.36 -2.44 -3.41 -3.86 -0.6 -0.73 -3.16 -0.15 0.38 0.31 -0.46 -0.35 -0.27 -0.27
0.45 0.22 0.25 0.15 0.24 0.03 0.06 0.25 0.23 0.4 0.32 0.28 0.66 0.34 -0.59 0.26 -0.4 -0.54 0.29 -1.29 -1.42 -2.13 0.08 0.09 -0.64 0.28 -0.1 -0.17 -0.22 -0.18 -0.17 -0.07
0.33 0.22 0.14 0.19 0.59 0.36 0.3 0.27 0.24 0.51 0.28 0.19 0.41 -0.38 0.13 0.57 -0.27 -1.04 0.61 -3.63 -4.09 -2.54 -0.01 0.02 -1.59 0.19 -0.2 -0.03 -0.04 0.09 -0.14 0.08
0.31 0.46 0.36 0.59 0.79 0.44 0.57 0.62 0.55 0.57 0.6 0.34 0.09 -1.12 -0.64 0.57 -0.21 -1.13 0.52 - - - 0.13 -0.19 -4.97 -0.1 -0.33 -0.25 0.13 0.02 -0.31 -0.19
0.58 0.41 0.69 0.52 0.76 0.92 0.87 0.73 0.81 0.83 0.73 0.66 -0.79 -0.76 -0.25 0.06 -0.31 -0.54 -0.33 -5.58 -4.05 -2.38 -0.3 -0.47 -4.7 -0.93 -0.7 -0.69 -0.29 -0.29 -0.23 -0.24
0.34 0.27 0.38 0.56 0.84 0.81 0.89 0.92 1.01 0.81 0.58 0.43 -0.69 -0.67 -0.03 -0.01 -0.48 -0.44 -0.21 -4.73 -3.03 -2.41 -0.57 -1.03 -3.87 -1.13 -0.26 -0.18 -0.08 0.02 -0.39 -0.22
0.41 0.39 0.44 0.44 0.38 0.47 0.47 0.45 0.43 0.61 0.42 0.43 -0.38 -0.63 -0.13 -0.2 -0.52 -0.72 0.16 -1.08 -1.22 -1.44 -0.41 -0.4 -1.55 0.15 0.2 0.25 -0.25 -0.15 -0.21 -0.23
0.45 0.36 0.35 0.38 0.32 0.33 0.38 0.38 0.54 0.6 0.7 0.54 0.1 -0.48 -0.06 0.28 -0.13 -0.42 0.17 - - -4.51 0.06 -0.18 -8.23 -0.12 -0.15 -0.22 -0.05 -0.08 0.12 0.26

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.