Heatmap: Cluster_275 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
-0.31 -1.37 -1.21 -0.78 -0.05 0.09 0.55 0.63 0.36 0.13 0.02 -0.47 -1.56 -2.82 -0.78 -1.1 -0.41 -1.35 -0.46 - 3.09 -0.18 -0.94 -1.22 0.89 -2.16 -0.84 -0.64 0.06 0.19 -0.39 -0.6
-1.12 -2.3 - -1.26 -0.37 -0.13 1.01 0.87 0.86 1.12 -0.33 -0.87 -3.35 -4.71 -1.47 -2.9 -1.3 0.13 -2.48 -1.38 3.17 - -1.41 -2.26 1.17 -1.81 0.73 -0.08 -0.39 -0.32 -0.71 -1.09
-0.68 -2.68 -2.68 -1.3 0.04 0.63 0.78 0.08 0.49 0.27 -0.14 -0.19 -4.62 -2.53 -0.43 -2.85 -1.38 -1.14 -2.01 -4.15 2.95 -0.16 -1.51 -1.85 0.4 0.39 0.96 1.16 -1.36 -0.91 -0.68 0.12

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.