Heatmap: Cluster_301 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
-0.26 -0.82 -1.59 -0.38 -0.44 -0.15 -0.45 -0.16 -0.48 -0.09 -0.38 -0.04 0.41 -0.43 0.55 -0.54 -1.31 -0.23 1.0 -3.29 2.24 - 0.14 0.8 -1.12 1.03 0.73 0.6 -1.23 -0.76 -1.0 -0.99
-1.11 -0.42 -1.08 -1.11 -1.97 -1.24 -0.6 -0.03 -0.45 -0.13 -0.98 0.0 0.03 -0.76 -2.91 0.77 -1.11 -3.72 0.78 - 2.19 - -0.13 -0.21 -0.4 1.56 0.49 1.25 0.68 0.42 0.2 -0.4
-4.47 - -3.13 - -4.69 - - -1.55 -3.81 - - - 0.26 0.85 -0.26 -0.19 -0.51 -2.21 0.05 -0.62 2.95 0.93 -0.8 -0.41 0.09 2.12 0.92 0.96 -0.44 -0.82 0.24 0.48
-0.83 -1.3 -0.86 -0.35 -0.28 -0.03 -0.32 0.18 0.03 -0.18 -0.78 -0.69 0.31 -1.05 0.05 0.62 -0.54 -0.05 0.67 -1.1 1.76 -4.33 0.18 0.36 0.4 0.59 0.54 0.43 0.17 -0.04 -0.73 -0.57
-0.52 -0.6 -0.72 -0.24 -0.55 -0.35 -0.43 -0.05 -0.54 -0.5 -0.1 -0.24 0.79 -0.44 -0.39 0.67 -0.69 -0.59 0.11 -4.56 1.88 -1.3 -0.25 0.14 0.23 1.08 0.57 0.37 -0.1 -0.34 -0.11 -0.19
-0.18 -0.14 -0.08 0.05 -0.13 0.43 -0.01 0.06 -0.07 -0.18 -0.18 -0.56 0.36 -0.74 -0.08 0.62 0.12 0.6 0.22 -4.35 1.7 - 0.25 0.15 -2.92 0.21 0.25 0.47 -0.02 0.11 -1.24 -1.12

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.