Heatmap: Cluster_303 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
-0.87 0.31 -1.17 -2.56 - -3.06 -5.75 -0.04 -0.52 -1.15 -0.94 -3.48 -3.55 - -6.39 1.04 -3.01 1.36 2.1 - - - -3.05 -0.9 3.19 1.97 1.32 - -3.16 -0.23 -1.62 -3.41
-0.66 0.02 -0.05 0.48 0.31 0.2 -0.26 -0.93 -1.72 -1.79 -2.03 -1.91 -0.57 -2.49 -3.68 -1.47 0.56 -1.15 -1.0 1.68 2.07 -0.98 -0.06 -0.76 2.06 -0.96 0.5 0.88 -0.82 -0.71 -1.01 -1.5

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.