Heatmap: Cluster_150 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
0.15 0.33 0.3 0.46 0.44 0.49 0.21 0.14 0.15 -0.03 0.03 0.08 -1.96 -0.91 -0.82 -1.51 0.49 -0.32 -0.55 -1.5 0.47 -1.44 -0.62 -0.95 1.01 -0.37 0.83 1.13 -0.01 0.01 -0.67 -0.74
-0.11 -0.12 -0.0 0.14 0.3 0.4 0.08 0.1 0.15 0.09 0.09 0.16 -0.18 -1.46 -2.32 -0.33 0.4 0.01 -0.23 -4.26 -1.11 -6.07 0.17 -0.11 1.09 0.36 0.74 0.84 0.42 0.37 -0.33 -0.49
-0.91 -0.63 -0.14 0.04 0.29 -0.38 -0.44 -0.5 -0.33 -0.86 -0.81 -0.9 0.1 -0.56 -0.34 0.67 0.34 0.12 0.77 -5.03 0.26 -1.81 0.47 0.43 1.41 0.59 0.42 0.46 0.44 0.43 -1.25 -0.82
-0.23 -0.44 -0.55 -0.28 -0.06 0.41 0.37 0.39 -0.07 0.02 -0.44 -0.3 -0.34 -0.58 -0.71 0.11 -0.0 0.25 0.51 0.03 0.59 -1.09 0.03 -0.24 -0.02 -0.29 0.24 0.31 0.43 0.39 0.14 -0.16
0.06 0.16 0.11 0.19 0.14 0.36 0.2 0.12 0.11 -0.15 0.03 -0.11 -0.51 -1.17 -0.8 -0.45 0.14 -0.04 -0.07 -0.7 0.05 -0.02 0.04 -0.13 0.65 -0.41 0.62 0.66 -0.04 0.04 -0.35 -0.37
-2.01 -1.39 -0.41 0.3 0.51 0.49 0.35 -0.12 0.0 -0.52 -0.9 -1.67 0.26 -0.78 -4.11 0.7 0.77 -0.61 0.59 -1.0 0.19 -7.31 0.84 0.56 0.47 -0.57 0.41 0.55 0.57 0.84 -0.59 -0.32
-1.0 -1.08 -0.66 -1.24 0.11 0.28 0.78 0.63 0.5 0.37 0.26 -0.75 -2.6 -2.55 -0.85 -1.08 0.51 0.49 0.0 -0.35 1.16 -5.48 0.17 -0.04 -0.38 -0.75 0.34 0.24 0.48 0.48 0.73 0.39
0.27 0.23 0.35 0.22 0.73 0.27 0.11 0.15 0.03 -0.24 -0.14 -0.03 -2.13 -1.84 -0.8 -1.53 0.31 0.29 -0.69 -0.57 0.17 -0.34 0.06 -0.02 1.23 -0.98 0.56 0.81 -0.07 0.14 -0.7 -0.97
-0.68 -0.59 -0.54 0.05 0.37 0.53 0.64 0.23 0.1 -0.35 -0.64 -0.61 -7.15 -2.24 -3.96 -4.11 0.81 0.93 -0.59 -1.76 -0.01 -4.0 -0.1 -1.02 1.3 -0.93 1.5 1.45 0.38 0.38 -0.08 -0.31
-0.06 0.01 0.0 0.12 0.06 0.26 0.1 0.24 0.12 -0.11 -0.1 -0.14 -1.07 -0.61 -0.85 -0.73 0.37 0.12 0.16 -2.37 0.38 -3.0 -0.47 -0.66 1.47 0.02 0.67 0.66 0.1 0.06 -0.18 -0.18
-0.43 -0.31 0.04 0.24 0.24 0.24 0.58 0.6 0.53 0.41 0.36 0.04 -2.89 -2.29 -2.57 -1.46 0.57 0.07 0.03 -2.65 -0.8 -1.75 0.01 -0.36 -1.26 0.9 0.68 0.87 0.49 0.4 0.13 0.0
-0.12 -0.02 -0.14 0.15 0.33 0.35 0.55 0.47 0.57 0.22 0.1 0.05 -2.42 -2.21 -1.98 -1.45 0.52 0.39 -0.76 -0.89 0.44 -0.56 -0.29 -0.73 1.01 -0.58 0.34 0.28 0.32 0.24 0.2 -0.22
0.14 0.42 0.41 0.44 0.47 0.4 0.35 0.18 -0.01 -0.31 -0.28 -0.02 -1.56 -0.63 -2.59 -0.92 0.05 -0.09 -0.06 -1.37 -0.64 -2.76 -1.06 -1.49 0.53 -0.52 1.05 1.12 0.21 0.12 0.71 0.33
-0.24 -0.25 -0.02 -0.07 0.06 0.1 0.3 0.32 0.25 0.06 0.0 -0.08 -0.79 -0.5 -1.35 -0.42 0.04 0.05 -0.07 -0.85 0.68 -1.21 -0.68 -0.93 0.88 0.06 0.74 0.6 0.08 0.16 0.1 0.14
-0.66 -0.18 -0.14 0.36 0.46 0.67 0.13 -0.22 -0.41 -0.64 -0.77 -0.88 -1.2 -0.7 -0.72 0.28 0.03 -0.58 1.1 -3.07 -0.27 -3.99 0.17 0.41 1.52 -0.75 0.58 0.86 0.03 0.15 0.12 -0.49
-1.95 -1.24 -0.61 -0.18 -0.06 0.97 0.5 0.35 0.14 -0.5 -0.53 -1.55 -0.01 -0.57 -1.88 0.26 1.21 -0.08 0.57 -3.73 -2.14 -5.84 0.85 0.62 -0.51 0.45 -0.0 0.45 0.89 0.69 0.02 -0.2
-0.99 -0.61 -0.26 -0.05 0.19 0.19 0.35 0.66 0.26 0.02 -0.18 -0.73 -2.41 -2.78 -1.74 -1.34 0.76 1.18 -0.29 - -0.09 -2.32 -0.08 -0.74 -0.63 0.08 1.37 1.51 0.76 0.64 -0.47 -0.79
-0.97 -0.81 -0.34 0.0 0.09 0.23 0.42 0.26 0.06 -0.26 -0.33 -0.76 -1.01 -0.98 -0.61 -0.86 0.6 -0.1 -0.13 -2.79 -0.71 -2.45 -0.12 -0.34 1.63 -0.39 0.85 1.16 0.81 0.97 -0.63 -0.76
-0.69 -0.55 -0.83 -0.07 0.0 0.11 0.18 -0.01 0.03 -0.26 -0.4 -0.32 -2.56 -2.23 -3.38 -1.95 0.58 0.45 -0.59 -0.64 0.02 -4.46 0.17 -0.42 1.78 0.83 0.9 1.15 0.41 0.33 0.11 -0.4
0.09 0.34 0.3 0.03 0.31 0.21 0.11 0.1 0.02 -0.04 -0.03 -0.16 -0.66 -0.22 -0.02 -0.49 0.17 -0.13 0.25 -1.08 -0.42 -0.87 -0.37 -0.28 0.16 -0.02 0.64 0.6 -0.01 0.1 -0.1 0.04
-0.25 -0.42 -0.21 -0.09 0.17 0.39 0.68 0.81 0.75 0.4 0.3 -0.06 -1.75 -2.02 -0.84 -1.47 0.29 0.34 0.09 -3.22 -1.17 -0.06 -0.2 -0.3 -1.57 0.04 0.64 0.75 0.67 0.76 -0.37 -0.39
-0.14 0.04 0.08 0.18 0.17 0.06 0.33 0.24 0.44 0.16 0.25 0.29 0.16 -0.9 -1.58 0.83 0.4 0.09 0.07 -1.22 -2.8 -4.02 0.04 0.39 -0.14 -0.31 0.07 0.49 0.41 0.42 -0.19 -1.0
-0.59 -0.35 -0.02 0.25 0.53 0.47 0.22 0.2 -0.11 -0.3 -0.23 -0.45 -1.44 -1.53 -1.64 -0.63 0.79 -0.03 0.54 -1.9 -0.39 -1.36 0.36 0.02 0.73 -0.35 0.51 0.44 0.66 0.71 -0.04 -0.1
-0.58 -0.12 -0.15 -0.2 0.18 0.25 0.24 -0.32 -0.37 -0.82 -1.05 -1.04 0.13 0.05 -1.78 -0.2 0.5 0.6 0.15 -1.6 0.57 -1.46 0.07 0.26 0.92 -0.94 0.64 0.75 0.06 0.08 0.28 0.39
-0.78 -0.78 -0.75 -1.46 -3.92 0.73 0.36 0.4 -0.54 -0.52 -0.03 -0.27 -2.39 -2.02 0.72 - 0.54 0.23 0.94 -1.78 - - -0.01 -0.39 2.29 -1.39 0.51 0.83 0.5 0.49 0.39 0.12
-0.21 -0.38 0.01 0.0 0.19 0.32 0.51 0.57 0.22 0.22 0.15 -0.03 -0.98 -1.3 -1.76 -0.9 0.23 0.02 0.04 -2.26 -0.44 -2.39 -0.29 -0.5 0.17 0.45 0.89 0.92 0.39 0.39 0.16 0.05
-0.56 -0.11 -0.53 -0.01 0.02 0.37 0.39 -0.14 -0.36 -0.29 -0.53 -0.5 -0.69 -1.02 -0.27 -0.32 0.4 -0.57 1.26 -2.68 -0.21 -2.55 0.62 0.57 1.63 -0.08 -0.23 0.33 0.64 0.6 -1.24 -2.21
-0.84 -0.49 -2.86 -0.74 -0.29 -0.66 -0.6 0.08 -0.6 -0.06 -0.13 0.16 -0.09 -1.53 -0.31 -0.08 0.16 -3.35 0.99 -0.28 -1.07 -0.73 0.38 0.54 2.22 0.45 -0.08 0.33 -0.16 0.48 -0.1 -0.31
-0.86 0.28 -0.43 0.27 -0.16 0.18 0.25 0.3 -1.09 -0.72 -0.29 -0.62 -1.88 -2.34 -1.16 -0.84 0.46 -0.7 0.92 - -0.56 -1.63 0.71 0.62 2.04 0.73 0.78 0.63 0.15 0.31 -2.5 -2.44
0.1 -0.47 -1.29 -0.83 -0.78 -0.54 -0.02 0.02 0.01 0.41 -0.26 -0.16 -1.6 -1.25 -1.75 -1.34 -0.18 0.84 0.44 -2.65 -1.69 -3.05 0.32 0.52 -1.13 1.11 1.55 1.29 0.62 0.45 0.07 0.28
-0.28 -0.26 -0.19 0.17 0.33 0.52 0.52 0.46 0.43 0.09 -0.02 -0.21 -2.19 -0.8 -0.33 -1.45 0.26 -0.16 -0.25 -1.7 -0.1 -2.31 -0.69 -0.9 1.22 -0.07 0.96 1.18 0.1 0.11 -0.27 -0.69
-1.12 -1.25 -1.38 -1.34 -1.66 -1.05 -1.17 -0.75 -1.54 -1.53 -1.12 -1.23 -5.29 -3.61 -5.49 -3.47 1.2 1.17 0.13 -0.99 0.36 -4.04 0.41 -0.44 0.33 1.04 1.89 1.94 1.12 0.98 0.29 -0.14
-1.69 -0.48 -2.42 -1.76 - -0.26 0.33 1.23 1.32 0.22 1.16 -0.31 - - - - 0.0 -0.95 -2.05 - - - -2.03 -2.02 2.2 1.13 0.92 0.63 1.85 1.56 -2.05 -3.71
-1.29 -1.66 -1.28 -0.22 -0.7 -0.11 0.01 -0.33 -0.24 -0.78 -1.04 -1.35 -0.1 -0.49 -0.98 0.03 0.99 0.27 0.7 - -3.98 -4.84 0.62 0.59 -1.63 0.13 1.17 1.48 0.93 1.12 0.8 -0.05
-0.16 -0.05 -0.04 0.16 -0.16 0.15 0.13 0.5 0.4 0.44 0.21 0.19 -0.86 -1.46 -1.39 -1.06 0.44 -0.09 -0.23 -2.27 -0.52 -1.17 0.36 -0.05 -0.01 1.06 0.26 0.54 0.35 0.33 -0.06 -0.29
-0.23 -1.39 -1.71 -0.61 -0.64 0.29 0.32 1.33 -0.63 -0.03 0.58 -0.53 -2.37 -3.05 -0.46 -2.32 0.13 0.4 -0.52 - - - -0.56 -1.19 -1.45 -0.12 2.19 2.48 0.03 0.08 -0.08 -1.27
-0.25 -0.03 -0.14 0.37 0.4 0.61 0.77 0.37 0.25 -0.05 -0.02 -0.22 -4.0 -2.18 -2.22 -2.33 0.19 0.29 -1.16 -2.81 0.28 -3.08 -0.89 -1.35 1.84 -0.51 1.07 1.32 0.06 0.0 -0.35 -0.92
-0.56 -0.64 -0.55 -0.49 -0.26 0.03 0.01 0.26 -0.26 -0.78 -0.95 -1.02 -1.45 -2.33 -1.24 -0.8 0.62 0.5 0.3 -1.22 -1.33 -2.97 0.16 0.61 1.01 -0.08 1.53 1.64 0.33 0.75 -0.36 -0.37
-1.02 -0.82 -0.51 -1.33 -1.52 -0.79 -0.36 -0.72 -0.03 -0.59 -1.01 -0.65 -6.78 - - -6.63 1.96 1.04 0.94 - - - 0.28 -1.28 2.75 -0.92 -1.97 -1.17 0.49 0.89 1.16 0.83
-1.0 -4.05 -2.99 -2.46 -1.64 -0.19 0.33 0.45 0.75 -0.57 -0.74 -1.34 -0.62 -1.08 0.37 -0.22 -0.14 1.0 0.7 -2.26 -1.6 -3.34 0.2 -0.22 0.04 0.52 1.43 1.58 0.88 1.05 -0.34 -0.59
0.45 0.39 0.23 0.12 0.22 0.3 0.55 0.34 0.06 -0.25 -0.15 -0.1 -1.23 -0.9 -0.98 -0.69 0.33 -0.05 -0.05 -1.74 -0.78 -2.39 -0.45 -0.72 1.04 -0.55 0.88 1.01 0.11 0.16 0.06 -0.52
-0.41 -0.39 -0.28 -0.29 -0.3 -0.04 0.05 -0.18 0.17 -0.06 -0.29 -0.36 -0.51 -1.58 -1.58 -0.22 0.59 0.42 0.45 -3.11 -0.41 -5.74 0.4 0.06 1.63 0.3 -0.04 0.3 0.56 0.63 0.38 -0.15
-1.09 -2.06 -1.22 -0.0 0.51 0.71 0.69 0.93 0.57 0.62 0.53 -0.19 0.58 -0.92 -2.21 0.3 -1.11 0.41 -0.71 -1.93 0.29 -2.32 0.59 0.99 -0.81 -0.63 -0.68 -0.71 0.51 0.48 -0.53 -0.13
-0.18 -0.27 -0.34 -0.24 -0.02 0.32 0.49 0.58 0.66 0.22 0.07 -0.13 -3.38 -2.15 -1.69 -1.65 0.53 0.06 -0.19 -1.09 -1.77 -2.42 -0.37 -0.81 0.23 0.36 1.27 1.48 0.52 0.52 -0.04 -0.5
-2.4 -3.46 -2.67 -2.15 -0.79 0.46 -0.13 1.37 0.46 0.41 -0.21 -0.14 -3.21 -2.37 -1.64 -3.18 -0.57 0.75 -0.53 -4.05 - - -0.36 -0.77 0.69 -0.83 2.16 2.38 0.36 1.02 -0.52 -1.59
0.1 -0.25 -0.27 -0.18 0.23 -0.05 -0.22 -0.07 0.07 -0.36 0.02 -0.29 -1.74 -2.95 -2.78 -1.04 0.33 0.38 0.03 -4.6 -1.19 -0.2 0.66 0.15 0.38 0.78 1.38 1.28 0.01 0.2 -0.3 0.06
-0.24 -0.15 -0.01 0.21 0.18 0.24 0.32 0.32 0.29 0.06 -0.01 -0.09 0.06 -0.89 -1.0 0.16 0.52 0.2 -0.13 -0.96 -0.06 -1.32 -0.24 -0.48 0.79 -0.16 -0.04 0.12 0.56 0.55 -0.31 -0.97
-0.0 0.46 0.21 0.15 0.25 0.56 0.57 0.39 -0.16 0.07 -0.22 -0.28 -1.11 -1.39 -1.75 -0.78 -0.18 0.06 0.11 -0.6 -0.4 -0.04 -0.24 -0.55 0.64 -0.26 0.87 0.86 -0.11 -0.13 -0.2 -0.21
-0.37 -0.24 -0.1 -0.16 0.07 0.48 0.36 0.3 0.38 -0.03 -0.36 -0.47 -0.69 -0.91 -0.34 0.04 0.3 0.07 -0.02 -0.13 -0.28 -0.97 -0.33 -0.4 1.09 -0.83 0.75 0.84 0.21 0.36 -0.6 -0.99
-0.32 -0.74 -0.36 -0.11 -0.22 -0.18 0.24 0.43 0.63 0.75 0.59 0.44 -3.55 -3.1 -4.0 -2.8 0.74 -0.06 -0.42 -4.79 -0.18 - 0.33 -0.06 -0.53 0.66 0.79 1.0 0.98 0.96 0.0 -0.52
-1.6 -1.22 -0.47 -0.12 0.24 0.75 0.16 -0.21 -0.94 -1.32 -2.01 -1.9 -1.9 -1.08 -4.04 -1.01 0.73 0.88 -0.01 -2.79 0.8 -2.72 0.1 -0.5 1.58 -0.95 1.35 1.52 0.2 0.11 0.39 0.3
-0.2 -0.31 -0.04 0.11 0.25 0.49 0.47 0.4 0.34 0.28 0.15 -0.02 -3.79 -2.86 -3.54 -2.88 0.4 0.24 -0.81 -1.95 0.66 -1.93 -0.66 -1.14 1.38 -0.2 1.07 1.0 0.05 -0.02 -0.02 0.17
0.0 -0.2 -0.15 0.02 0.19 0.18 0.21 0.46 0.36 0.22 0.23 0.21 -0.97 -0.69 -1.55 -0.77 0.35 -0.24 -0.38 -1.58 -0.48 -2.37 0.16 0.26 0.22 0.4 0.45 0.43 0.31 0.34 0.34 0.23
-0.26 -0.44 -0.33 -0.4 -0.1 0.06 -0.22 -0.19 -0.26 -0.47 -0.27 -0.49 -0.72 -0.59 -0.18 -0.51 0.62 0.91 0.08 -0.93 0.21 -1.31 -0.1 -0.21 0.76 0.07 0.7 0.57 0.29 0.32 0.35 0.34
-0.0 -0.22 -0.13 0.3 0.32 0.28 0.27 0.21 0.31 0.08 0.1 0.28 -4.22 -2.3 -4.47 -2.8 0.89 0.19 -1.23 -3.94 0.43 -5.99 -0.55 -1.18 1.67 -0.72 0.77 0.79 0.74 0.62 0.01 -0.46
-0.37 -0.47 -0.09 0.31 0.55 0.6 0.58 0.47 0.59 0.26 0.12 0.07 -2.94 -1.16 -1.4 -1.85 0.29 -0.52 -0.91 -1.26 -0.59 -1.52 -0.43 -0.82 1.19 -1.18 1.1 0.96 0.13 0.12 -0.1 0.36
-0.3 -0.37 -0.51 -0.12 -0.13 -0.2 0.05 0.24 0.51 0.15 0.12 0.13 -3.76 -1.3 -2.43 -1.9 0.65 0.34 -0.17 -2.43 0.61 -5.16 -0.21 -0.5 1.27 0.07 0.81 0.97 0.46 0.47 0.29 -0.08
0.34 0.37 0.49 0.52 0.6 0.42 0.48 0.01 0.25 0.02 0.25 0.19 -1.93 -1.83 -2.41 -1.37 0.56 0.23 -0.59 -1.46 -0.02 -2.05 -0.27 -0.88 0.92 -0.37 0.64 0.58 0.25 0.12 -0.46 -0.53
-3.08 -3.45 -2.35 -0.1 0.74 0.97 1.2 0.87 0.3 -0.01 -0.82 -1.67 -2.2 -2.41 -4.05 -2.41 0.19 -0.06 -0.49 -1.45 1.5 -2.68 1.33 0.58 -0.13 -0.17 0.41 0.03 0.45 0.23 -0.16 0.5
-1.2 -1.47 -1.79 -1.57 -0.44 -0.45 -0.32 -1.27 -1.42 -1.43 -2.02 -1.19 -0.42 -4.85 -3.82 0.27 0.04 -0.57 2.06 - 0.3 - 0.46 0.67 2.6 -0.13 0.34 0.79 0.75 1.07 -1.83 -1.63
-0.17 -0.08 0.15 0.17 0.14 0.16 0.12 0.02 0.1 0.02 0.01 -0.02 -0.48 -0.85 -0.44 -0.46 0.35 0.15 -0.19 -0.52 -0.07 -1.08 -0.15 -0.23 0.69 0.14 0.57 0.67 0.16 0.16 -0.21 -0.36
-0.69 -0.85 -0.5 -0.35 -0.01 0.32 0.69 0.8 0.69 0.34 0.2 -0.16 -2.07 -2.54 -5.79 -2.0 0.65 0.19 -0.57 -2.68 0.53 -2.53 0.3 -0.51 0.26 0.47 0.64 0.59 0.68 0.53 0.29 0.16
-0.71 -0.92 -0.51 -0.13 -0.1 -0.01 -0.16 0.08 0.02 -0.35 -0.52 -0.78 -0.03 -0.3 -1.07 -0.15 0.36 0.08 0.25 -1.46 -0.02 -4.8 0.39 0.14 0.14 0.56 1.14 1.04 0.56 0.64 0.05 -0.15
0.08 0.17 0.36 0.4 0.5 0.48 0.39 0.29 0.16 0.03 0.06 -0.02 -2.37 -1.47 -1.26 -1.58 0.33 -0.08 -0.15 -1.33 0.39 -1.2 -0.61 -0.86 0.88 -0.14 0.71 0.82 0.09 0.21 -0.27 -0.47
0.04 -0.14 -0.17 -0.0 0.12 0.16 0.32 0.25 0.38 0.15 0.31 0.13 -2.32 -1.63 -1.03 -1.74 0.34 -0.16 -0.39 -1.95 0.8 -2.62 -0.06 -0.35 1.27 -0.43 0.54 0.77 0.36 0.45 -0.17 -0.36

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.