Heatmap: Cluster_157 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
-0.92 0.21 0.55 0.49 -0.04 -0.56 0.24 -0.0 0.07 0.02 -0.46 -0.39 -0.85 -2.25 -5.03 -0.24 -0.91 -1.87 0.7 - - - -1.13 -1.35 -4.47 3.24 0.52 0.59 -0.05 -0.82 -0.6 -0.96
-1.39 -0.99 -0.65 0.07 -0.67 -0.92 -0.46 -0.4 -0.43 0.03 -0.4 -0.36 1.67 0.19 -1.61 0.49 -3.03 -1.0 -1.38 - 0.56 - -1.11 -0.48 1.15 2.93 0.28 0.15 -2.02 -2.34 -0.57 -0.99
0.31 -2.32 -1.13 -0.48 -1.16 -0.38 -2.27 0.64 0.95 -0.1 0.82 0.23 -5.6 - -4.69 -5.53 - -4.51 -5.7 -1.47 - - -4.63 -5.74 0.96 3.58 0.97 2.0 - -4.59 -4.54 -4.04
-0.2 -0.28 -0.84 -0.59 0.21 -0.25 -0.04 1.15 1.03 1.0 0.22 -0.32 -2.46 -3.17 -2.95 -1.36 -1.51 -0.39 1.8 - -2.3 - -1.93 -2.2 -1.25 2.42 0.6 -0.24 -0.67 -1.37 0.26 0.56
-0.18 -0.51 -0.46 -0.38 -0.11 -0.26 0.06 0.4 0.42 0.54 0.34 0.58 -1.3 -2.41 -1.86 -1.19 0.28 -3.82 -1.2 -2.94 -2.54 - 1.25 0.9 -1.01 2.63 -0.65 -0.12 0.13 0.03 -0.54 -0.72
- - -27.91 - - 1.55 - -0.47 -0.42 - - - - - - -1.48 -0.17 0.18 2.55 - - - - - - 3.05 1.54 2.93 -1.76 - - -1.85
-1.2 - - -2.32 - -2.23 -1.0 -1.64 -0.4 0.64 -0.76 -0.59 -1.53 -2.93 -1.15 -1.13 -0.81 -0.85 -0.08 - -0.79 - -1.21 -1.74 1.64 2.7 1.38 2.22 0.06 0.98 0.1 0.03
- - -1.02 -2.15 -1.62 -2.64 -1.77 - - -1.97 0.53 -2.76 - 0.56 -0.88 - - - -2.94 - - - - - - 4.55 1.59 - - -2.88 - -
-0.12 -0.06 0.41 0.36 0.75 1.05 0.61 0.41 -0.19 -0.1 -0.32 -0.12 -2.05 -1.46 -1.08 -3.6 -0.46 -1.08 -1.85 -4.04 -5.52 -1.76 -1.8 -2.74 -1.78 1.59 2.21 1.52 -0.97 -0.75 0.07 -0.01
-0.4 -0.58 -0.51 -0.34 -0.73 -0.11 -0.21 0.39 0.19 0.37 0.4 0.08 -0.8 -0.38 -0.05 -0.59 0.13 -0.42 0.02 -1.23 -2.17 -0.41 -0.27 -0.3 -0.71 1.28 0.77 0.91 0.27 0.24 0.25 0.57
-0.53 -0.68 -0.72 -0.64 -0.57 -0.68 -0.49 -0.01 0.0 0.05 0.11 -0.06 0.26 -0.05 -1.66 0.49 -0.54 -0.43 0.54 -1.48 -1.49 -2.6 -0.19 -0.18 1.14 1.55 0.97 0.76 0.09 0.18 0.06 -0.09
-0.59 -0.48 -0.32 -0.2 -0.36 -0.62 -1.01 -1.75 -1.94 -1.95 -2.0 -1.67 -0.92 0.96 -1.67 0.56 -1.24 -2.18 1.16 -3.48 0.04 - -1.44 -0.53 1.41 3.03 0.93 -0.02 -0.43 -0.33 -0.88 -0.89
-0.12 -0.71 -0.57 -0.35 -0.68 -0.58 -0.53 -0.12 0.17 0.29 0.61 0.31 -1.31 -1.42 -1.63 0.88 -1.27 0.28 1.65 -2.86 - -3.01 -0.34 0.14 -0.55 1.82 0.42 0.63 -0.2 -0.02 -0.11 0.33
-0.17 -2.88 -4.38 -3.32 -1.73 -1.3 -1.57 0.24 -1.85 -0.42 -2.49 0.02 -0.17 -0.15 -5.14 -1.32 -3.41 -1.9 0.22 -4.59 - - -2.53 -3.6 1.68 3.19 2.38 1.69 -0.81 -1.47 -1.08 -3.01
0.44 -1.27 -0.98 -0.42 -0.74 -0.91 -0.77 0.6 0.75 1.3 1.12 0.82 -0.54 -2.23 -1.97 0.48 -2.13 -2.87 1.92 -4.44 -4.29 -6.62 -1.85 -1.21 -2.31 2.72 -0.2 -0.41 -1.19 -1.36 -1.27 -1.06
0.45 0.06 -0.22 -0.04 0.29 0.35 -0.06 0.05 -0.09 0.26 0.13 -0.18 -1.71 -1.17 -0.8 -1.55 -1.22 -1.22 0.01 0.1 -0.99 -0.06 -1.57 -0.87 -0.51 1.52 1.99 1.34 -0.98 -1.29 -0.75 -0.7
0.4 0.17 0.02 -0.01 0.29 0.63 0.3 0.28 -0.19 0.36 -0.2 0.22 -2.27 -0.34 -1.67 -2.2 -1.25 -2.25 0.1 -4.19 -0.2 -2.12 -2.61 -2.34 0.12 1.91 1.57 0.92 -0.76 -0.73 -0.01 0.6
-1.44 -0.73 -0.27 0.31 -0.07 -0.61 -1.91 -1.13 -1.36 -0.93 -1.31 -0.86 -4.18 -6.46 - -4.86 0.73 0.87 -0.52 0.37 1.85 -6.78 -1.52 -0.76 0.09 3.06 -1.64 -1.25 0.68 0.6 -0.29 -0.89
-1.58 -1.13 -0.59 -0.76 -0.73 -0.67 -0.04 0.5 0.58 0.73 0.59 -0.19 -0.26 -1.63 -2.17 -0.46 -1.11 -1.1 -0.56 -4.01 -2.5 -3.19 -0.68 -0.92 -0.0 2.69 0.98 1.02 0.14 -0.4 0.35 -0.02
-0.34 -1.13 -0.84 -0.44 0.68 -0.18 -0.34 0.56 -0.6 -0.13 -0.97 -0.54 -0.8 0.85 -2.14 -0.71 -3.07 -3.08 -0.7 -4.55 -0.31 - -2.34 -2.04 1.3 2.24 2.35 1.24 -1.35 -2.05 -0.57 -0.68
0.45 0.06 -0.42 -0.41 -0.4 -0.67 -0.55 -0.07 0.01 0.19 0.32 0.6 -1.35 -0.41 -3.49 0.01 -0.57 0.29 1.63 -3.43 -2.76 -4.42 -0.82 -0.69 -1.92 2.4 0.07 0.16 0.35 0.05 -0.17 -0.9
-0.31 -0.91 -0.7 -1.49 -0.68 -0.52 -0.91 -0.47 -2.33 -0.6 -0.35 -0.64 -0.62 -5.95 -5.72 -0.16 -1.7 -2.7 1.15 - -0.32 - -0.45 -0.58 1.54 2.64 1.45 1.63 -0.71 -0.35 -0.36 0.28
0.13 -1.87 -0.96 -1.41 -0.34 0.32 -1.16 -0.2 -1.32 -0.32 -1.92 -0.95 -1.77 -1.21 -1.96 -2.89 -4.29 -1.87 2.97 -1.19 -3.12 -2.43 -4.59 -4.05 -3.55 2.98 1.88 1.06 -3.28 -4.16 -2.95 -2.24
-0.09 0.25 0.55 0.32 -0.22 -0.29 -0.52 -0.37 0.69 1.19 1.17 0.48 -5.02 -2.11 -2.69 -2.37 -2.12 -0.14 1.79 - - - -1.46 -0.87 - 2.96 -0.51 -1.01 -1.65 -1.09 -1.64 -1.83
- - - - - - - - - - - - - 2.38 -0.51 - - - 0.71 - - - - - - 4.29 2.29 - - - - -
-0.2 -0.27 -0.37 -0.38 -0.15 -0.45 -0.23 -0.15 -0.19 -0.05 -0.07 -0.13 -0.09 -0.31 -0.35 -0.15 -0.09 -0.32 0.18 -1.44 -1.11 -0.8 -0.02 -0.26 0.34 1.21 1.04 0.75 0.08 0.26 0.05 0.61
-0.02 -0.15 -1.96 -1.6 - - - 1.36 -0.93 -0.35 - -0.64 - - -1.53 - 0.15 - -1.47 - - - -0.44 -0.47 1.28 3.36 2.26 1.85 -1.64 -1.48 - -
-0.76 -0.84 -0.68 -0.63 -0.25 -0.6 -0.04 -1.36 -0.72 -2.12 -2.21 -1.26 -2.81 0.04 0.25 -1.71 -3.01 -0.53 -0.13 - -0.74 - -1.28 -3.01 1.5 3.46 1.67 0.74 -2.12 -1.36 -1.41 -
-0.81 -3.97 -1.22 -2.33 -1.31 -3.76 -1.62 -0.01 -0.61 0.53 0.15 -0.15 -0.44 -4.04 1.19 0.06 -0.52 -3.84 1.59 - - - -2.17 -1.68 - 3.58 - -0.0 -1.18 -3.76 1.1 -0.41
-2.33 -2.37 1.26 -0.46 0.93 -3.16 -1.81 -2.57 - -2.03 -3.51 -1.74 -0.84 -3.44 -2.93 1.07 0.76 -0.63 0.28 -2.16 - - -0.38 -1.0 - 3.6 0.41 0.02 0.61 -0.95 -0.71 -1.77
-4.11 - -3.59 -3.68 -0.02 - -0.23 -1.79 -0.59 -3.57 -1.1 - - 1.77 -0.18 - - -3.03 1.51 - - - - - - 3.54 2.51 1.88 - - -3.21 -3.27
- - - - - - - - - - - - - 2.04 - - - - - - - - 2.05 1.91 - 4.32 - - - - - -
-3.44 -3.02 -3.56 -0.39 -1.54 -1.48 -1.61 -1.07 -3.19 -2.51 -4.79 -3.59 -0.41 1.68 -1.45 1.3 -2.88 - 3.04 - - - -2.86 -4.38 - 2.74 2.01 1.26 -2.22 -3.45 -3.49 -2.56
-0.06 -3.52 -3.15 -0.13 1.05 0.26 -1.14 -0.22 -1.0 -1.16 -1.0 -0.31 -0.14 0.75 0.46 0.15 -3.29 -2.26 1.66 - - - -0.66 0.22 - 2.93 1.75 -0.07 -1.83 -1.69 -3.32 -3.37
-0.05 -0.5 -0.27 -0.36 -0.68 -0.7 -0.43 0.12 -0.16 0.53 0.35 0.4 -0.72 0.25 0.12 -0.62 -1.5 -1.2 -0.83 -0.09 -0.34 -2.1 -1.07 -1.05 -0.04 2.57 0.82 0.82 -1.13 -1.17 -0.48 -0.26
-1.35 -1.23 -5.01 -0.79 0.17 -0.67 -1.04 -1.43 -0.61 0.04 -1.38 -0.48 -3.56 0.43 -0.0 -2.19 -1.88 -3.96 -1.01 -1.53 - - -1.31 -0.71 0.55 3.12 1.89 1.81 -0.35 -0.21 0.01 -1.75
-0.42 -1.61 -0.52 -0.65 -0.04 -0.49 0.2 -0.18 1.11 0.56 0.88 0.29 -3.32 -6.54 -7.16 -1.31 -1.09 -2.24 -0.59 -4.59 -2.16 - -0.67 -0.12 -0.29 2.8 1.08 0.99 -0.17 -0.12 0.05 -0.34
- - - 0.68 - 0.81 - - - - - - - - 0.04 - 0.8 - 0.79 - - - - - - 4.49 - - 0.79 - - -
-0.73 -1.17 -1.08 -0.94 -0.37 -0.09 -0.33 0.43 -0.1 0.12 -0.37 -0.26 -0.13 -1.03 0.19 -0.18 -1.93 -0.15 0.37 -0.8 -5.54 -1.76 -1.22 -0.28 -0.85 3.07 1.04 0.81 -1.24 -1.05 -1.7 -1.17
-0.52 -0.65 -1.04 -1.0 0.32 0.35 -0.32 0.0 -1.48 -0.4 -0.75 -0.75 -0.7 0.24 1.37 -0.87 -2.01 -2.73 2.04 -0.6 - -2.94 -0.48 -0.83 -0.9 2.37 1.35 1.21 -1.77 -2.47 -1.97 -2.04
-0.33 - - 1.09 -0.54 -0.7 0.81 0.32 -0.68 1.04 0.59 1.26 -1.45 - - - -1.45 -0.92 -1.59 - - - 0.42 -1.65 - 3.79 -0.38 - - - -1.61 -
-0.52 0.03 0.32 0.37 -1.89 -0.03 -0.61 0.01 0.52 0.01 0.28 0.23 -1.26 -0.93 -2.16 -0.29 -0.33 -0.63 1.07 -2.89 -0.64 - -1.92 -1.97 0.62 2.36 0.83 0.87 -0.4 0.05 -1.4 -0.46
- - - - - - - - - - - - -1.56 1.52 0.09 -3.67 -3.82 -2.12 -2.35 - - - -4.12 - -0.18 3.8 2.09 2.89 -3.02 -3.08 -2.42 -2.59
0.82 -0.12 0.13 -2.76 -17.21 -0.89 -2.33 0.6 -2.6 -0.28 0.54 -0.26 -5.09 -6.59 - -2.56 -3.85 -0.02 1.75 - - - - - - 4.1 -1.13 - -5.03 -2.56 -6.68 -4.84
-1.15 -2.07 -1.6 -1.27 -0.16 -1.2 -0.4 0.95 0.84 0.9 0.74 -0.68 0.58 -2.85 -0.48 0.74 -0.91 -0.63 1.69 -3.43 -1.52 -3.2 -0.7 -0.17 -0.64 2.08 -1.18 -0.94 0.79 -0.07 -0.06 -0.64
-3.1 - - -2.68 - - - - - - - - - - - -0.27 - - 1.02 - - - - 2.56 - 4.22 0.05 - -0.28 1.31 - -
-4.42 -3.26 -3.49 -2.06 -3.91 -1.55 -3.93 -2.6 -3.15 -4.18 -4.14 -4.16 -0.94 0.44 -1.11 -1.39 -1.19 0.75 1.51 -0.12 -1.92 -2.38 -0.11 0.83 1.61 2.75 1.31 2.31 -1.15 -0.69 -1.53 -2.4
-0.36 -0.75 -0.63 -0.74 -0.54 -0.67 -0.58 -0.59 -0.6 -0.75 -0.65 -0.73 0.02 0.26 -0.67 0.43 -0.53 -0.75 0.56 -0.92 0.2 -0.9 -0.79 -0.5 0.19 1.87 1.25 1.18 -0.02 0.25 0.21 -0.0
0.18 -0.13 -0.27 -0.49 -0.81 -0.96 0.16 0.63 0.23 0.55 0.49 0.93 -1.29 -1.02 -1.62 -0.69 -0.32 -0.25 0.65 - -6.54 -7.02 -1.04 -1.22 -2.07 2.57 0.28 -0.45 0.74 0.41 -0.52 -0.15
0.11 -0.13 -0.45 -0.29 -0.5 -0.1 -0.07 0.06 0.06 0.11 0.14 0.08 -0.93 -1.66 -0.49 -0.9 -0.61 -0.06 1.12 -3.35 -5.91 -8.5 -1.18 -1.31 -1.27 2.76 0.9 1.14 -0.27 -0.2 -1.19 -1.75
0.68 -0.41 -1.08 -1.24 -0.83 -1.61 -0.55 -0.29 -0.57 0.09 0.06 -0.13 -0.01 -3.82 -4.73 0.52 -1.48 -2.27 -1.37 -2.85 1.05 - -1.91 -2.36 -2.09 3.17 -0.06 -0.53 0.02 0.18 0.72 0.85
-0.5 -0.46 -0.76 -0.7 -0.53 -0.54 -0.56 -0.57 -0.36 -0.46 -0.44 -0.72 0.29 0.04 0.1 0.48 -0.59 -2.17 0.18 -0.85 -0.47 -0.88 -0.17 0.05 0.84 2.17 1.14 1.16 -0.42 -0.46 -0.85 -0.93
-0.75 -1.02 -1.25 -0.85 -0.7 -1.03 -0.41 0.2 0.09 0.05 0.03 -0.15 0.46 0.53 -0.26 0.76 -1.46 -1.4 0.65 0.13 -0.56 -0.66 -0.63 -0.44 0.25 2.27 -0.05 -0.22 -0.32 -0.43 0.4 -0.35
-0.45 -0.6 -0.71 -0.3 -0.16 -0.82 -0.4 0.37 0.22 0.5 0.28 0.31 -0.26 -1.06 -1.52 -0.65 -2.76 -5.65 -1.65 -1.5 -1.54 -6.54 -1.65 -1.22 0.68 3.4 0.74 0.38 -1.57 -1.66 -1.75 -1.5
-0.91 -1.52 -2.49 -1.03 -1.0 0.28 0.69 -0.91 -0.09 -0.1 -0.82 -0.7 -4.16 -1.79 -0.02 -1.28 -2.44 -0.87 -0.37 -1.35 0.15 0.47 -2.16 -1.58 0.71 2.54 1.15 2.37 -0.96 -0.52 -1.32 -1.34
-0.37 -0.99 -0.44 -0.66 -0.74 -0.75 -0.34 -0.05 0.11 0.08 0.15 -0.2 -1.0 -1.16 -1.59 -0.22 -0.51 -2.07 0.04 -0.51 -0.69 -0.48 0.34 0.51 1.13 1.89 0.61 0.46 0.08 0.07 0.51 0.15
-0.36 -0.1 -0.18 -0.07 0.59 1.13 0.64 0.39 -0.22 -0.2 -1.25 -0.51 -1.85 -2.31 -3.1 -2.09 -3.0 -1.58 -0.82 -3.08 -2.02 -4.82 -3.77 -3.29 -0.47 2.5 2.49 1.64 -1.95 -2.12 -1.34 -0.77
-0.92 -1.99 - -6.14 -2.54 -4.13 -4.97 -1.45 -2.43 -4.48 -2.83 -1.57 1.95 0.15 -0.98 0.01 -3.56 1.88 0.78 - -3.12 - -1.81 -3.07 0.36 3.17 2.13 -0.01 -1.77 -2.89 0.17 -2.64
-0.22 -0.73 -1.44 -1.14 -0.59 -1.6 -1.3 -0.88 -0.69 -0.25 -0.2 -0.11 0.27 -3.11 -4.57 0.7 -1.36 -1.76 0.38 -2.26 -1.89 -1.96 -0.59 -0.59 1.74 3.05 0.43 0.58 -0.54 -0.47 -0.58 -0.07
-1.07 -2.11 -1.33 -1.47 -1.18 -1.67 -1.32 -1.02 -1.0 -0.28 -0.86 -0.52 -0.62 -1.6 -6.23 0.38 -4.04 -4.04 -1.44 - - - -3.51 -3.43 0.12 4.13 1.35 0.69 -2.68 -2.56 -2.31 -3.4
- -0.99 - - -2.33 - -19.87 - -22.86 -2.17 -20.6 -27.0 - - - -2.08 -0.52 -1.48 -0.66 - - - -11.46 - 2.78 3.65 -27.27 3.15 -1.22 -2.19 -2.21 -
-0.47 -1.17 -0.68 -0.36 -0.36 -0.38 -0.34 0.23 0.31 0.37 0.4 0.02 0.62 -0.34 0.33 -1.03 -1.58 -2.1 -1.16 -1.19 -2.85 -0.88 -0.04 0.09 -0.24 2.6 1.01 0.98 -0.94 -0.7 -1.56 -1.23
-0.27 -0.41 -0.27 -0.37 -0.41 -0.56 -0.52 0.07 0.04 0.34 0.15 0.11 -0.04 -0.41 -0.4 0.18 -1.03 -1.33 0.11 -0.74 -1.15 -0.78 -0.49 -0.02 0.78 1.9 0.85 0.7 -0.54 -0.44 -0.39 0.23
-0.42 0.47 -2.16 -2.3 -1.42 -3.43 -3.42 -1.33 -2.7 -2.55 -2.41 -1.0 1.65 0.17 -5.32 1.52 -3.97 -2.84 1.27 - -2.32 - -3.12 -3.42 2.11 2.92 1.9 0.31 -3.06 -3.25 -2.71 -4.36
0.56 -0.02 -0.95 -1.07 -0.83 -1.99 -0.81 -0.09 -0.14 -0.15 -0.27 0.23 -3.37 -4.26 -6.88 -1.24 -4.66 -1.04 1.92 -1.01 -0.13 - -2.8 -1.38 0.18 3.08 0.95 0.15 -1.27 -2.11 0.71 -0.51
- - - - - - - - - - - - 1.15 2.03 - - - - -0.25 - - - -1.09 -0.3 - 4.22 1.99 - - - -1.06 -1.14
-0.1 -1.37 -3.73 -4.16 -0.74 -1.39 -1.45 -0.07 -1.57 -0.46 -2.91 -0.97 -4.57 -1.49 -5.44 -1.68 -4.04 -2.44 0.74 - - -5.65 -2.27 -2.26 2.28 3.06 2.3 1.95 -1.53 -1.75 -0.91 -1.73
-0.91 -0.78 -0.66 -0.36 -0.29 -0.44 -0.1 0.13 0.28 0.15 0.22 -0.25 0.48 -0.6 0.09 0.41 -0.69 -0.94 -0.02 -0.79 -0.79 -1.38 -0.23 0.08 -0.35 1.92 0.95 1.07 -0.25 -0.23 -0.68 -0.73

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.