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Heatmap: Cluster_152 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
2.02 1.03 1.24 1.03 0.94 1.52 0.82 0.86 0.78 0.19 0.86 0.66 -2.59 -5.86 -2.81 -5.88 -2.91 - -3.11 - -1.92 - -1.66 -1.23 1.57 -0.38 -2.08 -0.0 -3.38 -4.24 -3.55 -3.66
2.83 0.67 0.63 -0.96 - - -1.62 1.1 - -1.24 -1.01 -0.57 0.49 1.45 -3.69 0.41 -0.7 - - - - - -11.04 -14.17 - 3.25 - - -0.86 - -0.04 -
0.52 0.54 -0.05 0.01 0.66 0.56 0.23 0.11 0.03 0.48 0.24 0.18 0.68 0.18 -0.29 1.37 -0.75 -3.01 0.13 -3.68 -0.6 - -0.51 -0.41 -0.7 0.6 0.43 0.21 -0.62 -0.79 -0.72 -1.01
1.63 0.34 -1.05 -1.58 -1.84 -2.42 -1.41 -1.47 -1.19 -0.62 -0.07 1.02 -6.99 -8.7 -7.6 -3.06 -0.01 -0.1 1.38 -2.2 -0.58 -9.15 -0.23 -0.42 -1.94 -0.93 -1.53 -1.17 1.33 1.33 2.33 1.48
1.41 0.64 -0.2 -0.46 -0.65 -0.78 -1.05 -1.52 -1.13 -0.91 -0.58 -0.21 -0.59 0.57 0.31 1.11 0.19 0.45 1.72 -7.48 -5.5 - 0.21 0.54 -6.06 -2.67 -1.57 -1.58 1.01 1.47 -0.03 0.01
0.9 0.43 -0.05 -0.07 0.05 -0.08 -0.3 -0.41 -0.24 -0.07 -0.15 0.37 0.82 0.17 -1.47 1.07 0.01 -0.6 1.07 -1.0 -1.78 - 0.04 0.32 -0.21 -0.34 0.09 0.16 0.28 0.36 -1.42 -1.24
0.56 0.42 0.34 0.24 0.36 0.31 0.36 -0.55 -0.44 -0.62 -0.86 -0.36 -0.5 -0.9 -2.25 0.71 -0.29 0.18 1.21 -4.54 -5.91 - -0.3 0.19 -3.98 -0.83 0.41 0.83 0.88 1.4 0.16 -0.22
0.93 0.45 -0.07 0.12 -0.03 -0.23 -0.41 0.47 0.3 0.38 0.55 0.58 0.29 -0.89 -2.65 0.03 -0.06 -1.25 0.3 -2.66 -0.08 -5.13 0.04 -0.03 -0.02 -0.72 -0.36 -1.41 -0.2 -0.23 0.91 1.14
0.78 0.88 0.54 0.33 0.15 -0.07 -0.23 -0.02 -0.28 -0.19 -0.15 0.29 0.75 0.85 -0.5 0.18 -0.23 -0.38 -0.27 -0.7 -1.04 -2.73 -0.12 -0.18 0.33 0.39 -0.03 -0.01 -0.58 -0.53 -0.44 -0.81
0.88 0.79 0.35 -0.29 -0.35 -0.7 -1.22 -1.19 -0.55 -0.41 0.01 0.54 0.37 1.21 -0.25 1.08 0.32 0.19 1.03 -4.53 -3.78 -4.13 -0.08 -0.48 -1.22 0.16 -0.75 -0.27 0.28 0.44 -0.16 -0.11
1.49 0.23 -0.08 -0.29 -0.54 -0.59 -0.46 -0.45 -0.19 0.03 0.43 0.71 -0.27 -0.79 -1.8 0.5 0.25 0.64 0.8 -1.09 -2.42 -1.12 0.44 0.43 -1.21 -0.34 -0.73 -0.64 0.58 0.48 -0.09 -0.2
0.42 0.28 0.15 0.16 0.24 0.09 0.12 0.24 0.13 0.36 0.34 0.35 0.12 0.39 -0.49 0.56 -0.65 -1.48 0.16 -1.12 -0.03 -1.07 -0.36 -0.13 -0.57 0.77 0.2 0.24 -0.39 -0.33 -0.72 -0.75
0.56 0.44 -0.12 -0.22 -0.07 -0.16 -0.42 -0.6 0.03 -0.4 -0.78 0.22 0.15 1.18 -0.68 0.97 -0.54 0.39 1.23 -2.52 -0.75 -0.55 -0.23 -0.31 -0.12 0.18 -0.94 -0.75 0.29 -0.07 -0.01 -0.21
1.38 0.94 0.42 0.13 -0.03 -0.24 -0.44 -0.73 -0.27 -0.1 0.15 0.56 -0.52 -0.33 0.13 0.31 0.2 0.26 1.28 -2.9 -2.98 -4.57 -0.41 -0.09 -1.35 -0.54 -0.71 -0.45 0.26 0.47 -0.15 0.05
1.3 1.51 0.59 0.56 1.84 1.37 0.07 -0.95 -0.65 0.11 0.86 1.35 - - -1.18 - -2.14 -0.87 -3.73 - 0.96 - -1.09 -0.49 1.77 -0.04 -0.74 - -1.62 -3.7 -3.73 -
0.95 1.24 0.85 0.75 0.52 -0.09 -0.63 -0.93 -0.34 -0.38 -0.05 0.29 -0.34 -0.51 0.68 0.15 -0.83 -3.47 -1.55 -0.31 -2.81 -7.91 0.92 1.19 -0.35 0.55 -0.26 -0.05 -1.45 -1.19 -0.48 0.04
1.21 1.54 -0.26 -0.87 -0.65 -0.6 -0.6 -1.29 -1.4 -1.34 -0.89 0.19 -2.08 0.95 0.84 1.04 -0.54 0.17 1.2 -5.66 -2.93 -8.92 -1.64 -1.77 -1.85 -0.19 1.24 1.36 -0.02 0.31 -0.69 -0.35
0.32 0.31 0.09 0.02 -0.2 -0.16 -0.13 -0.25 -0.15 -0.11 -0.06 0.22 1.19 -0.12 -0.04 0.86 -0.35 0.22 0.67 -3.51 -0.13 -1.01 0.31 0.55 -0.05 -1.59 -0.64 -0.42 -0.03 0.16 -0.3 -0.68
0.98 1.06 1.25 1.26 -0.73 0.75 0.52 1.01 1.67 0.91 0.97 0.71 - -0.48 -4.7 - 0.64 -3.42 -0.72 - - - -0.09 -1.17 - 0.88 -1.95 -2.19 -0.3 -0.92 -0.72 -3.13
1.29 0.51 -0.19 0.02 -0.43 -0.1 -0.37 -0.14 0.21 -0.0 0.3 0.95 0.18 -0.73 -0.24 0.3 0.13 -0.22 0.71 -3.04 -3.43 - -0.47 -0.17 -4.85 -1.12 -0.22 -1.03 0.45 0.76 0.54 0.99
0.95 0.5 0.36 0.32 -0.02 -0.14 -0.37 -0.27 0.41 0.14 0.63 0.74 -0.11 -0.56 -0.71 -0.17 -0.28 0.31 0.27 - - - 0.71 0.51 -3.07 0.3 -0.74 -0.43 0.36 0.22 0.14 0.37
1.28 1.23 0.54 0.23 -0.11 -0.3 -0.24 -0.69 -0.33 -0.45 -0.08 0.52 -6.32 -2.05 -1.81 -2.04 1.21 -1.33 1.24 -4.25 -1.63 -6.24 -0.29 -0.88 -0.78 0.44 0.06 0.86 0.77 0.92 -0.33 -0.52
0.94 0.34 0.04 0.03 -0.09 -0.02 -0.12 0.3 0.23 0.52 0.49 0.81 -0.67 0.11 0.17 -0.64 -0.52 -0.43 -0.24 -1.2 -0.74 -2.5 0.45 0.42 0.39 0.08 -0.03 -0.29 -0.38 -0.4 -0.44 -0.26
0.91 0.14 0.01 -0.16 -0.06 -0.21 0.21 0.61 0.56 0.95 0.88 0.81 0.56 -1.75 -3.33 0.31 -0.21 -0.81 0.43 -4.07 -2.08 -2.77 -0.08 -0.04 -1.02 -0.09 -1.15 -1.53 0.26 -0.04 0.63 0.5
0.16 -0.02 -0.03 -0.53 -1.17 -1.02 -0.72 -0.83 -0.38 -0.28 -0.95 -0.28 -0.37 1.23 0.06 0.92 0.59 0.79 0.69 - -5.84 - 0.6 0.51 -5.11 -0.5 -0.1 0.09 0.78 1.04 0.81 0.1
0.8 0.18 -0.06 -0.0 0.31 0.18 0.07 0.28 0.4 0.61 0.55 0.43 -0.04 -0.41 -0.64 -0.07 -0.45 -0.27 0.08 -3.66 -1.04 -3.32 0.56 0.88 -0.96 -0.24 -0.83 -1.42 0.18 -0.03 0.56 0.1
1.98 0.86 0.19 -1.01 -0.78 -2.36 -1.04 -1.08 0.02 0.01 1.26 1.1 -0.12 -2.34 - -1.51 -0.52 -2.38 1.55 - - - 0.04 -0.06 -0.6 -0.99 -0.88 -1.31 0.63 1.03 0.07 1.2
0.97 1.34 1.29 0.99 0.23 -0.32 -0.18 -0.46 -0.54 -0.3 0.1 0.71 1.05 0.2 -1.17 0.6 -1.51 -2.02 -0.37 0.33 -6.02 -5.09 -0.66 -0.22 -4.77 1.2 -1.09 -0.81 -0.9 -0.87 -0.39 -0.5
-0.24 0.66 - - - - - -1.53 - - - 0.23 -1.09 - - -1.06 1.14 0.13 0.37 - - - 1.84 -1.28 - -0.12 - - 2.59 1.4 2.26 2.06
3.57 - -19.84 2.34 - - - -16.1 - 1.32 - -22.0 - - - - - - - - 3.66 - - - - - - - - - - -
0.61 0.51 0.08 0.06 0.05 -0.01 -0.48 -0.51 -0.59 -0.53 -0.49 -0.29 0.68 -0.28 -0.42 0.34 0.24 -0.41 1.01 -2.79 -0.49 -1.24 0.14 0.32 -0.56 0.01 0.29 0.39 0.37 0.57 -0.46 -0.19
1.4 0.44 0.25 0.08 -0.2 -0.32 0.07 -0.55 -0.24 0.03 0.48 1.29 -0.26 -1.11 -1.06 0.88 -0.48 0.16 1.27 -1.24 -2.16 -1.55 -0.91 -0.51 -1.13 0.56 -0.77 -0.58 0.32 0.55 -1.6 -1.57
0.94 1.49 0.56 0.43 0.63 0.11 -0.13 -0.26 -0.17 -0.53 -0.29 0.03 -0.18 0.26 0.5 -0.14 -0.53 -1.3 -0.07 -5.75 -3.53 -3.37 0.45 0.57 -0.85 0.23 0.53 0.86 -0.85 -0.57 -1.05 -1.06
1.12 0.55 0.04 0.05 0.14 0.16 -0.55 -0.4 -0.06 0.21 0.17 0.1 0.08 0.03 -0.72 0.47 -0.62 -0.35 0.37 -8.7 -4.48 -10.51 -0.1 -0.18 -3.46 0.43 0.89 0.99 0.13 0.32 0.07 0.02
1.24 -0.21 -0.96 -1.12 -1.12 -1.32 -1.24 -0.99 -0.66 -0.36 0.22 0.66 0.7 1.12 1.18 0.67 -1.05 -0.99 -0.15 -2.04 -2.81 -1.0 -0.88 -0.56 -0.32 1.84 -0.04 -0.22 -0.11 0.05 0.1 -0.07
0.91 0.41 -0.27 -0.32 -0.21 -0.48 -0.52 -0.38 -0.08 0.25 0.12 0.23 0.52 1.03 -1.14 0.92 -1.0 -0.14 0.82 -4.12 -2.31 -7.1 -0.02 0.2 -2.19 0.46 0.18 -0.34 0.13 0.59 0.07 0.22
1.12 0.42 -0.76 -1.23 -1.6 -2.03 -1.44 -1.11 -0.83 -0.81 0.29 0.52 -1.8 -1.92 -3.47 -1.59 0.48 0.08 1.57 -4.34 -1.64 - -0.06 -0.68 -2.85 -1.0 -0.45 -0.64 1.53 1.66 1.88 1.14
1.95 0.85 0.23 0.35 0.37 -0.05 -0.5 -0.36 -0.27 0.41 0.29 1.33 -0.56 0.2 -2.18 0.32 -0.54 -0.28 0.34 -3.16 -4.93 - 0.36 0.54 -4.0 -0.7 -1.21 -1.54 0.18 0.3 -0.16 -0.78
0.75 0.68 0.43 0.45 0.4 0.23 -0.08 -0.07 -0.03 -0.03 -0.03 0.08 0.34 -0.29 -0.33 0.75 -0.7 -0.87 0.25 -3.98 -2.16 -3.54 -0.15 -0.14 -0.17 0.92 0.56 0.71 -0.36 -0.41 -0.86 -0.89
0.96 0.35 -0.05 -0.21 -0.33 -0.43 -0.45 -0.36 -0.15 -0.17 -0.04 0.15 0.91 0.84 -1.2 0.97 -0.17 0.48 0.73 -3.77 -1.28 -2.15 0.12 0.23 -0.68 -0.48 -0.72 -0.32 0.64 0.83 -1.13 -0.94
0.51 0.21 0.05 -0.3 -0.32 -0.62 -0.52 -0.36 -0.22 -0.01 -0.06 -0.0 0.4 0.7 -0.86 1.13 -0.28 -0.01 0.72 -1.04 -0.59 -2.21 0.34 0.45 -0.97 -0.55 -1.52 -0.96 0.99 1.07 -0.38 -0.29
1.46 0.34 -0.06 -0.26 -0.32 -0.74 -0.29 0.05 -0.3 0.33 0.17 0.48 0.29 0.23 -3.72 0.65 -0.71 -0.45 0.66 -6.65 -0.88 - 0.21 0.6 -0.77 0.96 -0.54 -0.89 0.32 0.02 0.44 -0.32
1.29 0.84 0.32 -0.31 -0.44 -0.2 -0.91 -0.85 -0.25 -0.07 0.15 0.47 -1.12 -0.38 0.44 -0.36 -0.16 0.57 0.77 -1.21 -1.08 -3.07 -0.22 -0.46 -0.95 -0.72 0.35 -0.18 0.28 0.31 0.62 0.48
0.78 0.49 0.17 0.09 0.25 0.11 -0.03 -0.14 -0.25 -0.13 -0.07 0.06 0.6 0.59 -0.54 0.78 -0.07 0.37 0.7 -3.62 -7.15 - 0.33 0.35 -2.85 -0.34 -0.35 -0.24 0.13 0.3 0.02 -0.02
0.87 0.4 0.23 0.2 0.14 -0.11 -0.32 -0.29 -0.31 -0.4 -0.17 0.1 0.18 0.13 0.13 0.62 -0.39 -0.65 0.43 -2.7 -1.76 -2.12 -0.1 0.21 -0.26 0.96 0.51 0.51 -0.29 -0.19 -0.27 -0.3
1.85 1.35 0.43 0.05 -0.13 -0.25 -0.58 -0.87 -0.48 -0.37 0.08 0.64 -0.48 -0.36 -1.06 0.12 0.25 1.03 0.45 -4.6 -2.12 -6.18 0.34 0.47 -2.47 -1.95 -1.29 -0.8 0.59 0.86 -0.82 -1.06
1.81 1.01 0.07 -0.22 -0.71 -0.02 -0.41 -0.17 0.39 0.63 1.18 1.55 -1.27 0.51 0.69 -2.24 -1.1 -0.88 -0.7 -5.41 -1.84 -4.95 -0.22 -0.21 -0.49 0.31 0.02 0.35 -1.77 -1.03 -1.17 -1.07
1.55 0.62 0.87 0.01 -1.6 -0.6 -0.15 -0.51 -0.03 -1.09 -0.04 0.32 -1.55 0.88 -2.18 -1.31 0.73 0.19 0.77 - - - -0.86 -1.21 0.37 0.69 0.15 0.96 0.44 0.69 -0.39 -1.19
0.99 1.2 1.11 0.92 0.27 -0.39 -0.37 -0.51 -0.64 -0.48 0.09 0.53 1.19 0.52 -0.98 0.74 -1.45 -1.34 -0.34 -10.34 -7.1 -2.55 -0.51 -0.01 -5.05 1.43 -0.64 -0.76 -0.49 -0.59 -0.22 -0.28
1.37 1.2 0.72 0.68 0.88 0.4 0.21 0.05 -0.1 0.14 0.53 0.61 -2.01 -4.1 -2.64 -1.09 0.24 -0.18 0.06 -0.3 -1.94 -2.18 0.13 -0.46 0.13 -0.25 -0.65 -0.54 -0.38 -0.31 -0.34 -0.49
1.34 0.47 -0.41 -0.31 -0.09 -0.14 -1.13 -1.55 -1.06 -1.05 -0.69 -0.21 -0.99 1.58 1.38 1.09 -0.34 1.29 0.97 -3.38 -5.26 -6.31 0.69 0.59 -4.76 -2.26 -1.65 -1.59 0.28 0.65 -1.31 -0.6
0.64 0.42 -0.08 0.07 -0.07 -0.04 -0.07 -0.04 0.29 0.42 0.31 0.58 -0.69 0.47 -0.3 0.24 0.12 -0.18 0.84 -2.42 -0.56 -3.33 0.05 -0.04 -0.06 -0.66 -1.05 -1.32 0.55 0.65 -0.29 -0.15
0.95 0.91 0.78 0.85 0.59 0.11 -0.18 0.04 -0.1 -0.01 0.03 0.33 0.06 0.16 -0.66 0.61 -0.65 -1.74 -0.1 -7.64 -1.84 -4.87 -0.75 -0.52 -1.05 1.67 0.29 0.11 -0.55 -0.67 -1.06 -1.32
1.78 0.95 0.18 0.28 0.38 0.12 0.59 0.1 0.18 0.57 0.19 -0.41 -2.87 0.33 -1.85 -0.31 0.55 -0.55 0.82 -6.5 -2.15 -4.78 -0.54 -1.41 -1.39 -1.78 -1.16 -0.77 0.08 0.14 1.52 -1.52
0.99 0.5 -0.05 0.11 -0.08 -0.21 -0.52 -0.7 -0.48 -0.34 -0.06 0.49 0.56 0.66 0.87 0.98 -0.18 -0.7 0.37 -1.36 -3.34 -2.35 -0.34 -0.56 -0.39 0.57 0.28 0.52 -0.18 -0.04 -0.6 -1.49
1.66 0.36 -0.45 -0.46 -0.88 -0.59 -0.6 -0.38 0.01 0.0 0.45 0.69 -0.87 0.24 -0.31 -1.14 -0.22 0.17 1.25 -1.44 -0.82 -1.24 -0.69 -0.67 -1.21 -2.12 -0.48 -1.0 0.73 0.82 0.38 0.93
0.52 0.55 0.12 0.13 0.15 -0.22 0.41 0.29 0.54 0.89 0.58 0.64 0.01 -0.94 -1.63 0.36 -0.67 -0.07 0.49 -3.23 -3.46 -5.52 0.21 0.35 -2.11 -0.04 -1.47 -0.85 0.87 0.46 0.04 -0.12
1.27 0.79 0.52 -0.25 -0.32 0.0 -0.36 -0.79 -0.06 -0.29 0.32 0.5 -0.29 -0.9 0.04 0.42 -0.17 0.01 1.73 0.09 -0.55 -3.89 -1.18 -1.7 -2.13 -1.68 0.14 0.11 -0.23 0.23 -0.18 -0.27
-2.4 - - - - - - - - - - - -0.82 - 0.39 -0.63 1.46 1.18 1.38 - - - 1.16 0.06 - - - 1.33 2.35 1.89 1.63 1.99
0.51 0.27 0.21 -0.22 -0.18 -0.22 -0.27 -0.63 -0.11 -0.53 -0.23 -0.61 -0.25 0.56 0.54 0.69 0.33 0.41 0.48 -1.19 -2.63 -1.32 0.65 0.55 -3.15 -0.77 -0.72 -0.48 0.68 1.12 -0.15 -0.15
1.71 1.11 1.15 1.05 0.54 0.44 -1.0 -0.29 0.21 0.09 0.52 0.82 -1.09 -2.06 -2.04 0.14 -0.55 -0.95 0.34 -4.79 -6.1 -3.27 -0.51 -0.16 1.16 -0.22 -0.19 -1.03 -0.78 -0.8 -1.17 -1.29
1.39 1.4 0.62 -0.05 -0.1 -0.65 -0.86 -0.78 -0.63 -0.67 -0.29 0.22 0.2 1.13 0.42 1.52 -1.45 -0.89 0.28 -5.41 -3.29 -4.43 -0.58 0.03 -1.46 0.4 0.61 0.37 -0.83 -0.47 -1.19 -0.88
1.18 0.58 0.01 -0.05 0.18 -0.01 -0.65 -0.18 -0.01 -0.28 -0.25 0.01 0.74 0.27 -0.06 0.46 0.16 0.31 1.81 -6.64 - - -0.29 -0.07 -4.21 -0.42 -0.73 -0.51 -0.01 0.28 -0.27 -0.06
1.74 1.21 0.26 -0.11 -0.62 -0.81 -1.33 -0.96 -0.75 -0.28 0.06 1.09 0.96 1.28 0.75 0.91 -0.94 -0.41 0.17 -3.97 -3.5 -5.78 -0.68 -0.2 -0.7 0.0 -0.48 -0.08 -0.5 -0.16 -1.76 -1.71
1.23 0.46 0.23 0.13 -0.39 -0.24 -0.8 -0.86 -0.41 -0.27 -0.52 0.3 -0.96 -0.42 -1.98 -0.8 -0.17 0.27 1.24 -2.34 -1.91 -2.8 0.09 0.07 0.65 -0.34 -0.15 -0.31 1.08 1.05 0.27 0.07
1.34 1.06 -0.16 -0.6 -0.49 -0.78 -0.63 -0.69 -0.55 -0.5 -0.27 0.58 -0.36 0.34 0.51 0.87 -0.88 -0.05 0.81 -1.64 -0.46 -2.64 -0.53 -0.01 -0.26 0.43 0.14 -0.03 -0.2 -0.01 -0.03 -0.01
0.34 0.22 0.44 0.43 0.5 0.43 0.23 0.18 0.14 0.37 0.25 0.24 0.66 0.02 -0.56 0.68 -0.77 -1.7 -0.05 -2.58 -0.92 -4.46 -0.45 -0.27 0.1 0.53 0.37 0.34 -0.65 -0.58 -0.48 -0.16

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.