Heatmap: Cluster_251 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00001p00221740 (evm_27.TU.AmTr_v1.0_scaffold00001.232)
60.6 48.26 28.15 10.81 21.88 12.21 1.6 2.15 2.91 3.74 39.27 39.06 21.67 17.98 24.22 29.06 31.99 34.14 23.67 44.92 32.78 28.48
AMTR_s00001p00258560 (evm_27.TU.AmTr_v1.0_scaffold00001.359)
26.11 12.85 12.5 35.08 61.42 0.0 0.26 0.09 0.21 0.22 54.32 38.16 53.47 39.89 57.87 66.87 75.79 58.58 52.09 64.84 50.57 51.47
AMTR_s00002p00128280 (evm_27.TU.AmTr_v1.0_scaffold00002.86)
228.35 269.18 280.27 115.16 428.7 2.79 7.94 0.77 10.01 11.01 262.22 345.4 171.68 91.83 135.29 385.9 308.85 555.96 350.55 189.89 106.1 155.04
AMTR_s00002p00201330 (evm_27.TU.AmTr_v1.0_scaffold00002.190)
28.69 14.43 27.14 1.02 4.85 0.0 4.91 0.0 4.63 5.27 17.74 17.28 14.42 8.51 5.54 19.35 42.64 22.12 24.89 15.42 11.39 10.71
AMTR_s00002p00243230 (evm_27.TU.AmTr_v1.0_scaffold00002.315)
3.94 9.4 6.89 0.84 1.2 0.0 0.06 0.03 0.04 0.05 6.43 11.45 4.08 0.89 3.52 16.5 5.85 8.37 11.29 6.83 2.97 4.06
AMTR_s00002p00268070 (evm_27.TU.AmTr_v1.0_scaffold00002.532)
44.82 38.2 55.55 21.97 38.75 0.63 0.99 0.14 1.65 1.87 38.58 48.85 28.43 14.62 18.38 54.86 67.19 98.19 47.36 15.53 39.51 40.97
AMTR_s00005p00222320 (evm_27.TU.AmTr_v1.0_scaffold00005.96)
16.72 20.76 15.36 0.17 5.85 0.0 0.67 0.0 0.75 0.99 23.92 20.63 16.26 13.16 9.98 9.76 25.93 15.71 20.3 18.49 16.37 10.28
AMTR_s00007p00026350 (evm_27.TU.AmTr_v1.0_scaffold00007.7)
710.01 324.38 322.12 57.89 689.14 8.06 5.49 13.61 25.67 31.13 280.56 301.03 165.41 77.42 453.33 418.07 536.2 981.91 425.11 162.55 162.25 60.34
AMTR_s00007p00117320 (evm_27.TU.AmTr_v1.0_scaffold00007.72)
2.05 4.16 1.22 0.0 13.71 2.46 0.88 0.0 0.64 0.84 10.7 20.22 3.93 2.88 4.7 7.6 4.8 24.58 15.98 4.88 7.06 2.95
AMTR_s00007p00246960 (evm_27.TU.AmTr_v1.0_scaffold00007.269)
35.12 97.49 57.68 6.65 27.51 1.45 5.98 0.44 6.44 5.62 56.65 43.0 53.37 30.98 44.38 32.21 40.0 46.46 48.58 87.21 31.22 40.72
AMTR_s00007p00253380 (evm_27.TU.AmTr_v1.0_scaffold00007.293)
107.95 87.57 48.42 0.3 52.68 1.63 20.3 0.04 13.95 15.0 78.22 64.82 54.84 34.26 41.13 72.35 122.09 73.28 49.44 66.72 48.72 45.28
AMTR_s00011p00085990 (evm_27.TU.AmTr_v1.0_scaffold00011.20)
7.82 7.58 0.0 1.86 1.55 0.0 0.21 0.0 0.13 0.23 8.08 6.87 6.43 2.17 2.39 21.27 6.62 10.18 7.76 9.63 9.45 3.26
AMTR_s00011p00193440 (evm_27.TU.AmTr_v1.0_scaffold00011.59)
491.82 425.99 579.63 159.43 311.81 360.52 124.7 120.02 48.73 66.75 277.14 298.72 221.37 141.61 198.65 280.81 273.3 456.11 450.88 462.52 134.6 163.24
AMTR_s00012p00240790 (evm_27.TU.AmTr_v1.0_scaffold00012.215)
29.68 42.6 23.37 24.74 41.73 1.25 4.46 0.05 3.87 4.9 78.18 48.56 60.07 25.2 39.74 48.69 47.45 43.2 45.91 77.03 29.93 44.5
AMTR_s00012p00247770 (evm_27.TU.AmTr_v1.0_scaffold00012.233)
12.5 43.74 32.53 17.98 22.39 23.21 10.31 9.82 8.35 7.63 58.11 45.51 54.99 32.04 24.13 20.25 26.66 39.84 43.11 66.05 24.08 51.35
AMTR_s00013p00245270 (evm_27.TU.AmTr_v1.0_scaffold00013.208)
35.72 40.83 19.57 2.41 27.3 0.0 2.02 0.13 2.5 2.39 35.69 36.42 28.67 14.07 32.51 38.49 36.65 44.64 53.51 46.16 29.25 24.33
AMTR_s00014p00226030 (evm_27.TU.AmTr_v1.0_scaffold00014.87)
62.37 45.65 40.62 27.21 143.65 23.59 6.56 0.81 10.12 11.87 135.81 203.34 57.45 62.81 112.77 189.34 99.78 174.95 129.1 85.98 40.97 50.12
AMTR_s00016p00174170 (evm_27.TU.AmTr_v1.0_scaffold00016.132)
11.15 36.18 34.21 14.61 31.08 0.23 0.05 0.06 0.06 0.04 22.5 20.48 12.94 7.41 13.11 17.16 12.5 16.53 17.89 29.03 10.93 15.99
AMTR_s00016p00208490 (evm_27.TU.AmTr_v1.0_scaffold00016.180)
3.17 64.83 29.18 16.86 44.34 0.54 3.52 3.21 6.46 5.9 33.39 30.45 30.87 27.52 62.18 104.14 78.44 64.54 62.23 62.68 31.92 28.89
AMTR_s00018p00173670 (evm_27.TU.AmTr_v1.0_scaffold00018.96)
28.63 33.47 0.0 7.2 25.44 0.19 1.01 0.03 1.29 1.23 16.47 20.11 12.07 6.85 6.57 21.44 24.17 42.97 36.44 10.73 9.37 9.0
AMTR_s00019p00155840 (evm_27.TU.AmTr_v1.0_scaffold00019.145)
31.81 11.48 23.24 2.02 7.21 0.34 0.08 0.72 0.12 0.33 21.25 13.59 12.83 3.55 5.85 24.17 28.87 16.14 20.06 14.69 8.26 9.94
AMTR_s00020p00040210 (evm_27.TU.AmTr_v1.0_scaffold00020.11)
57.42 152.19 71.72 17.52 56.23 10.04 0.64 2.03 1.08 1.21 163.21 98.32 87.29 64.08 59.91 94.37 151.84 87.23 87.23 97.98 55.45 59.84
AMTR_s00021p00097710 (evm_27.TU.AmTr_v1.0_scaffold00021.42)
100.39 116.4 110.27 71.17 104.14 1.38 15.9 2.41 19.18 19.82 412.92 389.08 335.2 305.59 501.09 1472.3 266.49 476.45 778.55 696.31 456.65 374.21
AMTR_s00022p00066270 (evm_27.TU.AmTr_v1.0_scaffold00022.46)
125.93 194.38 107.97 88.43 184.87 23.88 27.74 0.76 16.87 19.91 95.53 100.62 105.7 95.37 126.3 112.59 69.09 89.52 121.42 134.6 89.35 76.73
AMTR_s00022p00119520 (evm_27.TU.AmTr_v1.0_scaffold00022.111)
96.76 79.79 79.12 44.0 33.8 1.03 4.27 7.18 9.2 14.66 58.65 61.61 36.65 30.95 49.37 68.34 95.73 90.55 47.31 35.43 40.87 51.58
AMTR_s00022p00136750 (evm_27.TU.AmTr_v1.0_scaffold00022.128)
91.53 177.51 90.59 32.54 124.23 1.35 8.38 0.0 4.6 7.1 70.0 61.13 51.46 28.51 54.46 68.6 92.59 93.37 107.05 67.09 36.79 46.0
AMTR_s00022p00231410 (evm_27.TU.AmTr_v1.0_scaffold00022.312)
28.63 9.13 7.59 3.29 18.91 0.0 0.16 0.02 0.02 0.03 65.49 69.26 31.64 25.75 67.87 84.28 41.04 90.01 48.64 30.3 23.5 12.92
AMTR_s00022p00253640 (evm_27.TU.AmTr_v1.0_scaffold00022.401)
42.48 30.31 18.36 0.03 3.54 0.36 1.93 1.81 1.44 1.17 35.97 32.6 47.83 16.05 10.82 23.77 81.04 58.83 67.27 39.67 41.5 2.64
AMTR_s00027p00218270 (evm_27.TU.AmTr_v1.0_scaffold00027.82)
11.97 4.15 2.49 37.99 36.43 0.08 9.14 4.0 19.95 13.15 80.12 81.66 71.21 55.55 89.29 140.59 94.96 83.64 55.14 59.96 53.46 52.85
AMTR_s00028p00072750 (evm_27.TU.AmTr_v1.0_scaffold00028.16)
267.99 219.46 306.0 206.51 309.77 52.37 0.77 0.4 0.87 0.95 174.18 147.62 129.82 65.23 104.24 181.16 244.74 250.81 257.34 267.28 150.33 59.1
AMTR_s00029p00066410 (evm_27.TU.AmTr_v1.0_scaffold00029.63)
10.13 36.81 2.73 7.23 16.45 0.0 1.68 0.46 1.14 1.45 48.29 40.23 42.19 21.08 29.95 77.51 39.06 34.96 35.91 57.8 14.73 12.9
AMTR_s00033p00144300 (evm_27.TU.AmTr_v1.0_scaffold00033.87)
0.91 17.42 0.0 0.58 6.09 0.0 0.46 0.01 0.99 0.95 11.25 9.13 9.69 3.81 7.86 10.96 6.35 10.41 12.58 8.48 13.05 7.68
AMTR_s00036p00158260 (evm_27.TU.AmTr_v1.0_scaffold00036.77)
0.0 22.64 0.0 0.21 7.3 0.0 1.17 0.0 1.94 1.56 17.23 11.57 12.96 8.17 5.96 27.81 7.31 11.87 11.9 4.67 13.92 5.56
AMTR_s00037p00097690 (evm_27.TU.AmTr_v1.0_scaffold00037.35)
47.99 45.3 26.85 28.27 16.9 0.0 0.07 0.1 0.05 0.05 49.3 61.93 42.65 15.2 25.13 116.46 25.4 105.08 119.71 54.31 82.01 43.93
AMTR_s00039p00197260 (evm_27.TU.AmTr_v1.0_scaffold00039.162)
33.24 11.61 22.46 0.73 23.11 1.42 9.85 8.53 8.71 8.65 28.69 35.13 22.5 20.31 26.72 43.61 26.62 51.71 47.45 34.08 35.74 17.7
AMTR_s00039p00236920 (evm_27.TU.AmTr_v1.0_scaffold00039.228)
0.0 17.64 0.0 0.92 2.39 0.0 0.04 0.0 0.01 0.07 10.89 8.74 7.18 4.76 3.81 19.19 4.45 12.85 12.03 5.12 6.74 4.11
AMTR_s00041p00225610 (evm_27.TU.AmTr_v1.0_scaffold00041.261)
390.76 353.96 247.51 61.78 424.88 497.04 326.33 158.62 123.69 137.77 359.81 449.54 252.85 202.16 216.88 251.76 359.99 693.16 555.0 562.88 178.82 256.52
AMTR_s00045p00207040 (evm_27.TU.AmTr_v1.0_scaffold00045.275)
84.73 65.71 27.16 26.01 38.57 3.15 4.0 0.11 3.71 3.55 59.12 69.19 37.26 28.78 23.04 92.18 57.33 73.21 70.73 70.48 48.02 27.22
AMTR_s00048p00040650 (evm_27.TU.AmTr_v1.0_scaffold00048.10)
106.32 77.52 179.42 70.0 167.44 15.96 8.16 17.87 21.0 17.4 157.66 79.76 92.42 56.65 118.33 128.25 137.19 139.75 146.22 192.98 80.97 74.74
AMTR_s00048p00200340 (evm_27.TU.AmTr_v1.0_scaffold00048.166)
138.55 111.03 140.31 24.51 48.96 1.79 13.76 33.41 20.91 22.28 82.6 85.78 118.63 87.59 69.61 231.12 77.58 120.62 109.22 111.36 33.87 68.3
AMTR_s00058p00171600 (evm_27.TU.AmTr_v1.0_scaffold00058.157)
82.21 82.19 43.29 32.78 86.26 41.92 8.74 15.04 15.88 9.83 69.15 56.59 46.54 38.3 32.31 91.57 54.1 103.63 118.04 67.23 56.88 30.56
AMTR_s00059p00198210 (evm_27.TU.AmTr_v1.0_scaffold00059.219)
18.94 33.67 10.35 16.0 17.74 0.09 6.79 0.06 7.84 7.74 36.54 41.6 30.0 16.22 30.69 36.29 25.08 34.77 41.29 32.29 25.82 19.91
AMTR_s00062p00111890 (evm_27.TU.AmTr_v1.0_scaffold00062.90)
38.84 26.22 23.94 1.57 10.45 0.78 0.08 0.04 0.28 0.28 33.14 27.11 22.13 13.59 12.84 32.4 24.08 23.74 24.71 25.57 23.73 19.75
AMTR_s00065p00031350 (evm_27.TU.AmTr_v1.0_scaffold00065.12)
1.3 13.18 11.0 2.04 7.34 0.0 0.24 0.0 0.14 0.24 9.97 9.64 5.24 1.63 5.61 16.1 9.02 12.93 10.93 8.79 4.5 5.18
AMTR_s00066p00099810 (evm_27.TU.AmTr_v1.0_scaffold00066.80)
200.62 219.38 151.69 194.13 75.85 2.52 4.47 8.71 4.63 4.64 214.19 174.28 153.75 73.52 98.48 106.74 219.43 109.97 95.28 112.03 49.03 160.71
AMTR_s00067p00046000 (evm_27.TU.AmTr_v1.0_scaffold00067.27)
32.6 33.65 54.88 0.06 17.73 0.49 0.4 0.06 0.64 0.72 30.42 23.77 11.09 5.33 13.2 36.82 62.96 29.03 23.32 22.98 18.22 14.16
AMTR_s00067p00179200 (evm_27.TU.AmTr_v1.0_scaffold00067.186)
279.02 333.57 227.64 30.8 248.82 2.79 0.3 0.45 0.79 0.79 224.58 212.6 118.1 59.1 105.08 224.34 238.92 293.7 254.73 289.41 149.73 96.55
AMTR_s00071p00121710 (evm_27.TU.AmTr_v1.0_scaffold00071.97)
19.88 8.57 0.65 7.28 3.96 0.0 0.91 0.0 1.18 1.48 15.72 15.28 11.93 3.73 9.42 34.66 15.02 11.7 18.22 20.04 12.49 10.24
AMTR_s00078p00062760 (evm_27.TU.AmTr_v1.0_scaffold00078.33)
78.46 58.09 53.08 6.87 35.1 0.54 1.16 2.21 1.75 2.19 62.64 50.35 46.14 20.68 23.43 75.3 77.5 65.6 57.91 77.87 55.08 28.3
AMTR_s00078p00147960 (evm_27.TU.AmTr_v1.0_scaffold00078.123)
29.4 25.95 39.8 38.58 64.96 1.91 9.07 3.06 6.93 7.36 48.54 42.98 47.48 28.26 39.11 54.87 47.0 79.21 81.87 65.95 30.65 26.1
AMTR_s00088p00132770 (evm_27.TU.AmTr_v1.0_scaffold00088.99)
32.07 60.25 56.81 12.24 19.18 1.43 1.11 1.11 0.96 0.99 48.67 34.92 26.35 11.58 14.64 72.81 62.71 38.0 40.3 38.31 19.91 19.09
AMTR_s00090p00100220 (evm_27.TU.AmTr_v1.0_scaffold00090.42)
31.67 24.11 10.54 20.89 14.75 0.09 0.89 0.11 2.09 2.2 23.12 18.59 12.82 12.51 11.02 18.92 21.48 14.68 14.42 14.49 22.67 14.1
AMTR_s00098p00115780 (evm_27.TU.AmTr_v1.0_scaffold00098.31)
92.38 72.97 85.72 28.86 281.32 40.39 12.38 34.16 8.46 7.98 121.65 91.27 76.3 50.84 69.4 185.16 209.19 271.38 209.12 100.93 62.57 33.2
AMTR_s00149p00022460 (evm_27.TU.AmTr_v1.0_scaffold00149.7)
19.23 121.04 130.95 26.4 67.07 0.77 4.04 4.09 4.82 6.71 48.56 58.26 36.52 36.92 34.56 18.71 33.95 42.72 43.56 68.22 17.35 26.63
AMTR_s00153p00061670 (evm_27.TU.AmTr_v1.0_scaffold00153.28)
66.77 104.98 49.54 60.06 142.93 0.12 25.09 27.6 23.95 28.72 77.09 83.88 83.24 85.69 117.46 50.92 47.99 57.05 60.56 78.99 43.22 61.66
AMTR_s00157p00073660 (evm_27.TU.AmTr_v1.0_scaffold00157.38)
13.11 10.56 3.03 0.43 11.83 0.06 0.34 0.0 0.87 0.56 21.46 20.83 20.7 13.95 27.52 53.4 27.9 27.54 21.11 22.04 19.77 22.28
AMTR_s00322p00016350 (evm_27.TU.AmTr_v1.0_scaffold00322.3)
41.71 97.0 79.82 7.36 31.95 2.88 5.9 6.19 8.49 8.71 62.01 65.31 54.11 31.12 40.61 48.44 65.18 80.46 62.71 72.29 32.41 54.08

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)