Heatmap: Cluster_74 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
-1.57 -1.58 -2.09 -0.51 -0.9 -0.99 -2.2 -0.9 -0.09 -1.34 -1.13 -1.14 -1.37 -2.7 -1.62 -0.93 -0.94 -1.32 3.12 0.11 2.22 -4.2 -1.14 -0.88 1.54 -1.21 -0.3 -0.78 -0.51 -0.27 -0.18 0.5
- -0.53 -0.17 -0.28 - -1.29 1.06 0.38 -1.74 -1.6 - - -1.0 - -0.05 -1.78 -0.52 1.02 - - 3.57 - -1.05 -1.17 1.47 1.35 0.07 - 0.03 -2.0 - -2.08
-0.55 -0.25 -2.87 -0.19 -0.15 0.37 0.54 0.79 0.39 -0.56 -1.33 -1.08 -1.29 -0.45 -1.54 0.12 -3.15 -1.58 -0.69 -0.7 2.89 0.12 -1.32 -1.17 -1.66 -1.53 0.91 0.56 -0.47 -0.0 -0.14 -0.07
- - - - - - 0.56 - - - - - - 0.65 1.04 1.63 0.47 - 3.27 1.8 2.08 - - - - 1.86 - - - 0.52 - -
-2.08 - - - - - - -0.86 - - - -0.7 - - - - -0.73 - - - 3.37 - 0.38 -0.73 2.9 - 2.86 - -0.71 -0.71 0.29 -0.77
-0.09 -0.35 -0.3 -0.25 0.35 -0.02 -0.88 -0.94 0.05 -0.06 -0.17 -0.56 0.36 0.57 -0.01 0.84 0.47 -1.64 0.8 - 1.12 -3.72 1.23 0.63 -1.21 -0.64 -0.77 -0.82 0.08 0.43 -0.07 0.03
-1.18 -1.91 -1.97 -0.71 -1.06 -0.1 0.54 -0.05 -0.45 0.05 -0.38 -0.64 -1.97 -0.56 -0.03 -0.37 -0.02 0.98 2.48 0.33 1.67 -2.27 -0.86 -0.98 -0.73 -1.64 -0.25 -0.36 -0.09 0.19 0.09 -0.32
-2.23 -1.25 -1.38 -0.79 -0.93 -0.59 -0.57 -0.91 -1.2 -1.6 -2.99 -1.58 0.86 -0.92 1.04 0.34 -1.6 -0.16 2.47 0.44 1.96 -1.54 0.34 0.73 0.85 -0.34 -0.22 -0.48 -0.82 -0.71 -2.15 -2.08
0.55 -1.65 -0.68 -2.4 - -1.99 -2.61 -1.49 -2.7 -2.19 -2.51 0.31 -3.35 -2.62 -1.36 3.19 -1.13 0.37 0.61 - 2.86 -1.92 -3.53 -0.34 -1.41 -0.43 -0.67 - 0.16 -0.46 0.2 -0.75
-0.59 -0.62 -0.43 -0.21 -0.03 0.11 -0.29 -0.28 -0.3 -0.31 -0.31 -0.51 0.61 0.34 -0.37 0.69 -0.22 0.63 -0.19 0.52 0.93 0.48 0.66 0.83 -0.09 -0.93 -0.77 -1.03 -0.09 -0.19 -0.58 -0.6
-1.21 -0.0 -0.9 -0.46 -0.47 -2.01 -0.77 -1.24 -1.34 -0.41 -0.43 0.2 0.37 -0.76 1.1 0.86 -1.11 0.94 1.7 - 1.3 - -0.19 0.63 -0.3 0.93 0.14 -0.71 -0.26 -0.61 0.04 -0.03
-0.34 0.03 -0.01 0.1 -0.17 -0.12 -0.1 -0.32 -0.04 -0.05 -0.2 -0.2 0.1 0.84 0.0 -0.0 -0.11 0.19 -0.43 -0.0 0.76 -0.75 0.86 0.81 0.05 -0.99 -1.42 -1.55 -0.17 -0.17 0.12 0.32
- - - - - - - - - - - - -2.93 - - 1.27 1.05 2.06 -0.03 - 2.96 - 1.34 1.42 - - - - 1.27 1.75 0.73 0.88
-0.16 -0.03 0.05 -0.08 -0.22 -0.03 -0.18 -0.12 -0.22 -0.03 0.15 -0.02 0.78 0.74 0.59 0.93 -0.66 -0.53 0.41 -2.82 1.16 -1.62 -0.07 0.11 -1.14 0.67 -0.14 -0.15 -0.46 -0.45 -1.04 -0.84
-1.05 -1.6 -1.8 -0.78 -1.37 0.33 -0.6 - - -1.75 - -0.24 -1.25 -2.23 1.31 0.22 -2.38 0.17 3.4 -0.73 1.72 0.76 -1.34 -1.37 1.52 -1.31 - - -1.45 - -2.41 -0.9
- - - - - - - - - - - 0.03 - - - - - - 3.99 - 3.92 - - - - - - - - - - -
-2.0 0.77 -1.09 0.33 -3.21 -0.95 -1.08 -0.23 0.09 -1.55 0.06 -2.38 -0.06 0.14 0.22 -1.02 -1.44 -0.32 2.81 -2.38 1.98 -1.71 -1.19 0.16 0.22 - 0.7 0.93 -1.78 -1.59 -2.15 -1.73
-2.61 -3.09 -1.02 -1.56 -2.89 -0.63 0.51 -0.02 -0.76 - - -3.17 -1.97 -1.75 0.4 -0.01 -1.41 -0.86 3.49 - 2.2 - - -0.51 1.46 -0.88 -0.07 0.29 -0.73 -3.05 -2.07 -2.13
-0.57 -0.31 -1.9 -0.11 -0.33 -1.94 -0.32 -1.83 -0.75 -0.19 -1.37 -0.57 -1.35 1.34 0.61 1.98 -1.24 -0.75 -0.38 - 3.35 - -0.8 -1.95 -1.51 -0.93 -2.91 -0.51 -0.7 -1.7 -1.52 -1.22
- -3.21 - - - -0.59 -0.71 -0.63 -3.39 -3.33 -0.86 -3.33 -0.5 1.54 -2.78 -0.47 0.53 -0.89 1.4 - 2.73 -1.46 0.06 1.56 - 0.72 -0.79 0.03 1.21 0.28 0.19 0.16
-1.48 -0.85 -1.74 -2.93 -0.15 -1.83 0.78 0.19 -0.72 -0.61 -0.69 -0.81 - -0.79 -1.07 -2.4 -1.4 0.14 1.87 - 3.5 - -2.36 - -0.39 -0.62 0.32 1.18 -0.84 -0.57 -4.7 -3.18
0.48 0.33 -0.02 0.23 0.19 0.39 -0.67 -0.27 0.31 -0.72 -0.71 -0.22 -3.89 -3.92 0.52 -2.82 -1.16 -1.23 1.92 -2.47 1.27 0.8 -3.05 -2.26 -1.05 1.22 1.62 1.12 -1.71 -2.46 -2.28 -2.35
- -2.27 - - - -0.17 -2.24 0.09 -2.14 - - -2.14 - - -0.54 - - - 3.37 - 3.92 - - -2.16 - 0.0 - - -0.12 - -2.11 -0.57
- - - - - - - - - - - - - - - - - - 3.95 - 4.05 - - - - - - - - - - -
-0.54 1.97 - -0.48 -1.67 1.5 -0.13 -1.38 0.26 0.94 -1.25 -1.05 -1.74 - 1.42 -1.59 - - 2.27 - 2.82 - - -1.97 0.08 - - 0.26 - - -1.95 -2.03
-0.44 -0.41 -0.51 -0.89 -0.44 -0.83 0.29 -0.03 -0.03 0.03 -0.51 -0.16 -0.77 1.02 -3.64 0.29 -1.25 -0.55 -0.97 -1.38 2.47 -2.85 -1.35 -1.62 1.79 1.34 0.29 0.31 -1.05 -1.44 -1.79 -2.03
-0.55 -0.21 -1.08 0.34 1.08 0.87 -0.25 0.48 -0.39 -1.51 0.24 -1.31 0.9 0.1 1.16 0.94 0.61 - 1.3 -1.65 0.15 - 0.82 -0.26 - -0.32 -0.86 - 0.03 -0.27 -0.04 -0.81
- - -1.89 - - - - - - -0.92 - 0.7 - - -2.23 - - - - - 3.63 - - - - 2.33 2.31 2.74 - -1.57 - -
-0.46 -0.05 0.18 -0.06 0.04 0.08 0.07 -0.1 0.17 -0.37 -0.35 -0.73 -0.83 -0.82 -0.18 -0.67 0.34 -3.01 -0.35 -1.02 0.83 -0.76 1.35 1.12 0.48 0.13 0.29 0.61 -0.06 0.08 -0.64 -0.79
-0.34 -0.68 -0.8 -0.43 -1.33 -0.28 0.1 0.89 0.66 0.37 0.39 -0.09 0.34 -1.1 -0.15 -0.34 -1.53 -1.87 0.04 -1.62 2.25 -0.49 -0.82 -0.5 -0.8 1.17 0.13 0.56 -0.88 -1.22 -0.57 -0.25
-1.36 -0.57 0.2 1.45 1.45 1.17 1.12 -0.07 -0.43 -0.93 0.28 -0.46 - -0.12 - -2.24 -0.33 -1.1 0.3 - 1.9 - -2.95 -1.8 - - 2.14 -0.74 -0.59 -0.31 -0.08 -0.87
-1.88 -1.87 -1.58 -0.59 -1.64 -1.82 -0.04 -0.65 -2.57 -2.61 -3.3 -0.96 0.2 0.63 0.82 0.3 0.17 1.4 -0.61 -0.38 2.05 - 2.34 1.29 -3.21 -1.65 -2.33 -0.71 -0.24 0.53 -0.85 -0.56
-1.8 -1.75 -1.61 -0.13 -3.5 -0.9 0.59 0.92 -0.12 -0.9 -1.28 -0.48 0.2 -0.74 -0.13 -0.89 -3.12 -1.09 1.53 - 2.24 -1.63 0.83 1.49 0.76 -0.59 -0.77 -0.95 0.28 0.34 -0.16 -1.23
- -2.56 -3.84 -1.58 -1.79 -1.28 -2.36 -3.45 -5.44 -3.15 -5.21 -4.2 -2.87 -2.87 -0.54 -0.56 -0.78 1.22 1.38 0.74 3.0 2.05 -0.77 -0.44 1.97 -0.68 0.63 -0.15 -1.67 -1.69 -3.46 -2.12
0.08 -0.98 -0.12 0.24 - -0.89 -1.92 -0.54 -0.98 -0.86 - -0.77 - -0.52 -0.68 - -2.48 -2.82 -0.89 - 3.9 -0.95 -3.34 -3.55 -1.45 1.59 1.17 -1.1 -0.34 -1.47 -2.51 -
- - - - - - - - - - - 3.02 - - - - - - - - 4.58 - - - - - - - - - - -
-1.52 0.06 - -0.91 -3.01 -0.47 -1.51 0.33 -1.14 -0.01 -0.34 -2.22 -1.29 -0.02 -0.56 -0.01 -1.35 -2.01 2.85 - 1.97 - -0.23 -2.01 2.0 -0.37 1.15 0.16 -1.17 -3.01 -3.06 -1.13
- - - - - - - - -0.72 -2.73 - -2.55 1.05 0.17 - 0.94 -0.21 0.06 3.23 -1.44 2.01 0.86 -2.32 -2.18 1.96 - -1.11 -0.09 -0.43 0.05 -1.31 -0.78
- - - - - - - - - - - - - - - - - - - - 5.0 - - - - - - - - - - -
-0.99 -1.41 -0.44 0.15 -0.32 -2.76 0.94 -0.31 -0.82 -3.08 0.23 -0.41 0.96 0.22 0.44 0.36 0.51 - 1.58 - -1.49 - 1.92 1.35 -0.76 0.24 -1.6 - 0.42 -0.04 -2.88 0.64
-1.01 -1.75 0.59 -0.93 0.72 -0.49 -0.37 -0.25 -0.8 0.07 -0.04 -0.94 1.04 2.08 2.07 0.38 -1.05 -3.33 0.52 - 1.89 - -1.5 -2.38 -0.21 -1.77 -0.23 -0.58 -1.1 -1.79 -1.61 -1.89
- - - - - - - - - - - - - - - - - - - - 5.0 - - - - - - - - - - -
-0.41 -0.05 -0.46 0.17 0.41 0.19 0.26 0.49 0.1 0.05 -0.02 -0.3 0.41 0.28 1.13 0.6 -0.25 -0.88 0.3 -2.14 0.58 -1.39 0.25 0.52 -0.21 -0.6 -0.79 -0.99 -0.1 -0.07 -0.52 -0.57
- - - - - - - - - - - - - - -0.44 - - 1.68 0.12 - 3.62 - 1.07 - - - 2.6 - 0.12 0.16 1.14 1.1
- - - - - - - - - - - - - - - - 0.56 - 1.55 - 4.2 - - - 2.6 1.66 - - - - - -
-1.83 - - - - - 0.82 - -0.59 - - - - -0.24 -0.3 - - - - - 3.45 - - - - 2.79 3.29 - - - - -
-0.25 0.11 0.37 0.57 0.52 0.92 -0.1 -0.29 -0.49 -0.57 -0.82 -0.71 -0.47 0.69 -0.12 -0.35 -0.15 - 0.47 -3.84 1.73 -3.73 0.38 0.08 1.0 -0.8 0.63 0.56 -1.15 -1.21 -1.09 -0.79
-0.3 -0.3 -0.41 0.1 0.12 -0.05 0.25 0.25 0.21 -0.09 0.01 -0.17 -0.52 -0.62 -0.3 -0.23 -0.44 -1.16 -0.15 -0.46 1.38 0.31 -0.53 -0.51 -0.69 1.02 0.93 0.91 -0.6 -0.49 -0.73 -0.63
-0.73 0.02 -1.06 -1.3 -0.84 -0.89 -0.51 -0.52 -0.4 -1.47 -0.34 -0.69 -0.47 -1.79 1.31 -0.01 0.42 0.37 1.29 -1.18 2.14 -1.93 -0.66 -1.91 0.16 0.5 0.44 0.34 -0.14 0.03 -0.28 -0.0
-2.82 -0.39 -1.64 - 1.26 -1.83 - - -0.87 1.1 -0.11 0.4 -1.1 - 0.1 -0.4 0.85 0.18 0.68 0.17 2.62 - -0.53 -0.68 - - 0.78 - 0.27 0.36 0.89 0.76
-0.42 0.66 -0.14 0.53 0.56 -0.77 0.73 -0.26 0.94 0.37 1.33 0.32 -1.27 -1.7 1.17 -1.06 -0.07 -1.39 1.48 -1.72 1.12 -0.45 -1.38 -3.01 -1.79 -1.95 -0.67 0.21 -1.87 0.01 -1.61 -0.87
0.24 -0.56 -0.3 -0.48 -0.18 -0.71 -0.21 0.26 0.35 0.4 0.25 0.49 1.87 0.61 0.53 1.23 -1.36 -2.2 -0.95 - 1.17 -3.36 0.03 0.31 - -0.47 0.04 -2.06 -0.78 -0.53 -0.05 -0.06
0.12 -0.6 0.33 0.41 -0.53 -2.25 0.35 -1.0 -0.96 -0.55 -0.89 0.01 -1.0 -0.5 0.62 0.12 -0.54 0.79 0.55 -3.62 1.78 -0.14 1.4 -0.05 -1.01 -0.87 -0.66 -0.62 0.28 0.09 -0.17 0.04
-0.21 0.48 0.96 -0.03 0.07 0.6 0.24 0.36 -0.09 0.83 0.74 0.77 -0.92 -0.61 0.49 -0.1 -0.35 0.88 0.24 - 0.92 -2.44 -0.58 -0.59 -0.93 -0.49 0.41 -1.27 -0.88 -0.54 -1.25 -1.55
-0.99 -0.53 -0.17 -2.85 0.11 -2.27 1.09 -2.19 - -1.66 -1.5 -2.42 1.07 -0.31 -0.25 0.34 0.76 - 0.07 - 1.32 - 2.16 2.05 - - - -0.1 0.69 0.34 0.52 0.27
-0.34 -1.29 -1.34 -0.73 -0.31 0.57 0.69 0.53 0.23 0.28 0.04 -0.51 -1.82 -2.54 -0.26 -1.09 -0.02 -0.0 -0.47 -4.76 2.15 0.71 -0.4 -0.65 -1.1 -1.29 0.34 0.22 0.24 0.28 0.66 0.14

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.