Heatmap: Cluster_329 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
2.0 2.28 1.5 1.43 0.33 1.24 -0.02 0.35 0.72 0.96 0.51 0.98 -2.95 0.0 -0.27 -1.79 -4.07 - -3.07 - - - -4.12 -4.01 - -0.74 -2.61 0.43 -4.02 -4.04 - -
1.64 1.78 0.87 0.69 0.55 0.08 0.02 0.04 -0.06 0.75 0.54 1.06 -3.41 0.46 -1.13 -3.72 -0.99 -0.38 -1.99 - -0.22 -4.04 -2.32 -2.62 -2.7 0.21 0.1 0.46 -2.2 -1.61 0.3 -0.12

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.