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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Aerial tissue - Light - ZT1 | Aerial tissue - Light - ZT3 | Aerial tissue - Light - ZT5 | Aerial tissue - Light - ZT7 | Aerial tissue - Light - ZT9 | Aerial tissue - Light - ZT11 | Aerial tissue - Dark - ZT1 | Aerial tissue - Dark - ZT3 | Aerial tissue - Dark - ZT5 | Aerial tissue - Dark - ZT7 | Aerial tissue - Dark - ZT9 | Aerial tissue - Dark - ZT11 | Roots | Root elongation and differentiation zone | Root meristematic zone | Aerial roots and rhizophores | Shoot tips | Microphyll | Strobili | Shoot apical meristem - AC | Shoot apical meristem - Core | Shoot apical meristem - P1 | Stem - Top | Stem - Bottom | Whole plant | Aerial tissue - Stress - Dark | Aerial tissue - Stress - High light | Aerial tissue - Stress - Cont | Aerial tissue - Stress - 37C 1h | Aerial tissue - Stress - 37C 3h | Aerial tissue - Stress - 4C 1h | Aerial tissue - Stress - 4C 3h |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 5.0 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 2.15 | - | 4.53 | - | - | - | - | - | - | - | - | - | - | 2.13 | - | - | - | |
| - | - | - | - | - | - | 1.44 | - | - | - | - | - | 1.53 | 2.2 | - | - | - | 3.39 | 0.39 | - | - | -15.64 | 1.45 | - | - | - | - | - | 0.35 | - | 2.3 | 0.09 | |
| -2.86 | - | - | -1.19 | -0.76 | -1.96 | - | -2.78 | - | -2.61 | -0.76 | -3.51 | 0.45 | 2.91 | -4.24 | -0.28 | - | 3.66 | -0.88 | - | - | - | - | -3.76 | - | 0.27 | 1.67 | 1.04 | - | - | -3.73 | - | |
| -0.18 | 0.17 | -0.59 | 0.14 | 0.22 | 0.09 | 0.38 | 0.17 | 0.28 | -0.4 | 0.32 | 0.45 | 0.15 | -1.34 | -2.2 | -0.46 | -1.89 | 2.59 | -1.39 | - | -1.55 | -1.69 | -0.42 | -0.56 | -0.17 | 1.59 | 0.25 | -0.36 | -1.33 | -0.9 | -1.26 | -0.84 | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | 2.3 | - | - | - | 4.47 | - | - | - | - | - | - | - | - | - | - | - | - | - | 2.29 | |
| -1.34 | -2.69 | - | -2.28 | - | -2.48 | -1.68 | - | -2.93 | -1.86 | -0.8 | -0.06 | -1.39 | -2.35 | -2.24 | -0.69 | -1.53 | 2.56 | 0.61 | 1.83 | 2.47 | 0.65 | 0.1 | 0.28 | -0.48 | 1.28 | -1.32 | -0.31 | -0.22 | -1.52 | -1.55 | -0.33 | |
| -3.97 | -4.42 | -0.76 | -2.77 | - | - | - | - | - | -5.12 | -2.43 | -3.69 | -3.07 | -1.68 | - | -3.19 | -3.93 | 4.9 | - | - | -1.42 | -4.54 | - | - | -3.89 | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | -8.63 | - | - | 4.95 | 0.2 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 4.99 | -1.65 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| -1.45 | -2.35 | -1.74 | -2.48 | -14.32 | -1.16 | -2.53 | -2.45 | -1.9 | -2.89 | -4.04 | -2.89 | - | -18.69 | -3.13 | -4.54 | -2.08 | 4.66 | 0.4 | - | -1.31 | - | -2.65 | -2.15 | - | -3.05 | -1.08 | - | -2.84 | -3.27 | -1.17 | -1.11 | |
| -0.84 | -1.47 | -4.19 | -1.98 | 0.84 | -0.62 | -1.5 | -1.5 | - | -0.86 | -0.5 | -1.25 | - | -2.72 | -1.05 | - | -3.74 | 4.24 | -0.56 | - | 1.52 | - | -3.72 | - | -0.42 | -2.21 | - | -0.68 | -1.86 | -2.12 | -1.28 | -1.91 | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 2.94 | - | 4.18 | 2.63 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| 0.68 | -0.26 | 0.56 | -0.38 | -0.36 | -0.56 | -0.48 | -0.22 | -1.04 | -0.46 | -0.25 | -0.05 | -1.73 | -4.57 | -3.33 | -1.72 | -2.43 | 3.15 | 1.03 | - | - | - | 1.5 | 1.65 | -0.23 | -1.34 | -2.05 | -3.19 | -1.1 | -0.9 | -1.46 | -0.94 | |
| -2.64 | -2.65 | -2.9 | -3.16 | -3.18 | -1.72 | -2.49 | -2.48 | -2.54 | -3.56 | -2.37 | -2.77 | -4.27 | -4.03 | -4.61 | -3.08 | -0.15 | 4.16 | -0.72 | -1.71 | -0.61 | -3.38 | 0.31 | -1.18 | 1.93 | -2.23 | -2.12 | -2.52 | -0.66 | -0.61 | -0.13 | 0.08 | |
| -3.03 | - | - | -2.03 | -1.43 | -1.44 | - | - | - | - | - | - | 1.15 | - | - | -0.43 | - | 4.22 | 3.0 | - | - | 0.03 | -1.64 | - | - | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 3.89 | -3.13 | - | 4.09 | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | -2.07 | - | - | 4.9 | - | - | 0.87 | - | - | - | - | - | - | - | - | - | - | - | |
| - | -2.91 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 4.67 | -2.64 | - | 2.62 | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | -0.06 | - | - | 4.83 | -1.23 | - | 1.1 | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 5.0 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| -0.77 | -0.16 | -0.91 | -1.17 | -1.07 | -0.74 | -0.95 | -0.71 | -0.76 | -0.4 | -0.14 | -0.7 | 0.78 | 0.56 | 0.75 | 0.45 | -1.68 | 1.33 | 0.78 | 0.64 | 2.8 | -3.87 | -1.78 | -1.18 | -0.05 | -0.95 | -0.35 | -0.58 | -1.53 | -1.67 | -1.36 | -1.57 | |
| - | - | - | - | - | - | - | - | - | 0.85 | - | - | 1.16 | - | 0.38 | 1.19 | - | 3.75 | - | - | - | - | - | - | - | - | 3.45 | - | - | - | - | - | |
| -3.25 | -1.89 | -2.83 | -1.12 | -0.28 | -2.94 | -1.53 | -1.97 | -4.08 | -2.25 | -1.03 | -2.16 | - | -0.9 | -1.77 | -3.78 | - | 4.43 | 2.04 | -2.94 | -2.66 | - | - | -3.85 | - | -2.88 | 0.12 | -1.76 | -3.94 | - | - | - | |
| - | -0.96 | - | -4.12 | - | -4.16 | -2.16 | -2.77 | - | -3.46 | -2.64 | - | -1.55 | -0.89 | 0.97 | -0.95 | -3.89 | 3.73 | 2.75 | -0.54 | 2.22 | - | -1.71 | -3.09 | - | -1.43 | -1.12 | -1.82 | -2.48 | -2.01 | - | - | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 4.45 | 2.35 | - | - | - | - | - | - | - | - | - | - | - | 2.34 | - | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 4.12 | - | 3.87 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 4.93 | 0.51 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| -2.82 | -0.07 | -2.28 | - | - | - | -2.0 | -2.15 | -0.66 | - | -2.02 | -0.94 | -0.52 | - | - | - | - | 4.31 | -2.23 | - | 1.44 | - | - | - | 1.63 | - | - | - | -0.14 | -0.16 | -2.14 | -2.23 | |
| - | - | - | - | - | - | - | - | - | 0.29 | - | - | -0.33 | - | - | - | - | 4.6 | - | - | - | - | -0.36 | -0.5 | - | 1.78 | - | - | -0.39 | - | - | - | |
| -0.44 | 0.5 | 0.01 | -0.4 | -0.6 | 0.04 | -0.31 | 0.0 | -0.11 | -0.14 | -1.03 | 0.01 | -0.61 | 0.31 | -0.31 | -1.28 | -2.04 | 2.66 | 0.51 | -5.16 | 1.46 | - | -1.16 | -1.09 | -0.55 | -1.22 | 0.79 | 0.12 | -2.44 | -2.61 | -0.3 | 0.46 | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 4.92 | 0.83 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | -16.43 | - | - | - | - | - | - | - | - | - | -22.75 | - | - | - | 5.0 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 4.15 | 3.58 | - | - | - | 0.15 | 0.29 | - | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | -1.04 | - | - | 4.7 | 2.48 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | -0.37 | -0.6 | - | - | 1.67 | - | - | - | - | -0.14 | - | - | - | - | - | 1.44 | 4.23 | 2.04 | - | - | - | -0.14 | - | - | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 4.7 | - | - | 2.6 | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | 1.42 | - | -0.55 | - | 0.85 | 0.17 | - | - | - | - | - | - | - | - | 3.59 | 3.52 | - | - | - | - | - | - | - | - | - | 0.54 | - | -0.43 | - | |
| - | - | - | 0.81 | - | - | - | - | - | - | - | - | - | - | - | - | - | 4.49 | - | - | - | - | 1.47 | - | - | - | - | - | - | 2.34 | - | - | |
| -1.21 | -0.43 | 0.04 | -2.38 | -1.84 | -0.5 | 0.45 | -0.15 | -0.93 | -0.03 | -0.42 | -0.22 | -1.12 | - | -2.59 | -0.22 | -1.61 | 2.03 | 1.44 | 0.16 | 2.6 | - | -0.45 | -0.32 | 1.52 | -0.05 | -0.92 | -1.05 | -1.3 | -1.45 | -2.29 | -3.35 | |
| -1.29 | -0.93 | -2.98 | -2.09 | -0.01 | -0.3 | -2.48 | -0.99 | -0.97 | -0.11 | -1.79 | -1.18 | 0.84 | -0.31 | 0.14 | 0.32 | -2.32 | 3.0 | 1.39 | - | 3.05 | - | -3.39 | -1.57 | -1.08 | -1.32 | -2.74 | - | -3.05 | -1.99 | -3.19 | -3.99 | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 5.0 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| -0.24 | - | - | -2.0 | - | - | 0.36 | 0.94 | 1.21 | -1.53 | 0.54 | 0.43 | - | - | - | - | -1.25 | 2.8 | -0.32 | - | - | - | 0.78 | 0.68 | 1.67 | 0.76 | -0.06 | - | 0.62 | 0.51 | 0.0 | -0.07 | |
| -3.24 | -3.29 | -2.98 | -2.9 | -2.46 | -1.92 | -1.79 | -0.94 | -2.47 | -1.92 | -1.59 | -3.46 | -3.12 | 3.18 | -2.55 | -2.22 | -4.17 | 3.98 | -1.11 | - | -3.2 | - | -5.25 | -4.25 | - | 0.51 | -0.14 | -0.9 | -2.67 | -2.66 | -5.32 | -3.39 | |
| -0.41 | -0.12 | -0.09 | 0.04 | -0.26 | -0.06 | 0.06 | -0.22 | -0.4 | -0.32 | -0.77 | -0.58 | -1.27 | -0.33 | 0.48 | -0.57 | -0.46 | 1.87 | 0.35 | -0.02 | 0.51 | -0.12 | -0.53 | -1.04 | 0.98 | -0.85 | 0.95 | 0.9 | -0.7 | -0.55 | -1.45 | -1.29 | |
| - | - | 0.21 | - | - | -0.65 | - | -1.12 | - | -0.97 | - | - | - | - | - | - | 0.25 | 4.53 | -5.69 | - | - | - | - | - | - | - | - | - | -0.79 | 0.18 | 0.3 | 0.97 | |
| -0.15 | - | - | - | 1.27 | - | - | - | - | - | - | - | - | - | - | - | - | 4.84 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| -0.87 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.3 | - | - | 4.78 | - | - | - | - | 0.51 | - | - | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | 0.83 | - | - | -0.97 | - | - | - | -0.72 | - | - | 4.59 | 2.09 | -0.32 | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | -3.86 | -3.23 | - | - | - | - | - | -0.79 | -1.3 | - | - | - | -4.42 | - | - | 4.94 | - | - | - | - | - | - | - | - | -2.76 | - | - | - | - | - | |
| -3.32 | -2.26 | -2.92 | -2.08 | -0.97 | -3.73 | -2.41 | -2.47 | -4.64 | -2.28 | -2.45 | -3.95 | -5.18 | -5.63 | -3.18 | -5.19 | - | 4.83 | -1.34 | - | - | - | -3.75 | -4.33 | - | -2.35 | -4.19 | -3.17 | -4.42 | -4.34 | -3.07 | -3.13 | |
| -3.88 | -4.46 | -4.0 | -3.3 | -2.4 | -2.76 | -2.24 | -2.64 | -2.36 | -2.61 | -2.81 | -3.37 | -5.43 | -6.54 | - | -2.11 | -5.48 | 4.53 | -2.53 | - | 1.02 | - | -1.69 | 0.69 | 0.63 | -2.2 | -1.6 | -1.91 | -3.25 | -3.05 | -3.08 | -2.09 | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 5.0 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| -1.76 | - | -1.98 | - | - | -1.57 | 0.75 | 1.02 | - | -1.6 | - | - | - | - | - | - | -1.65 | 3.9 | -1.6 | - | 0.63 | - | -1.48 | 0.75 | 2.62 | 0.23 | - | - | - | - | - | -0.7 | |
| - | - | - | - | - | - | 0.96 | - | - | - | - | - | - | - | - | - | - | 4.91 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| -1.81 | - | - | 0.22 | - | - | - | - | - | -1.71 | - | -1.57 | - | -1.55 | - | - | -1.29 | 4.58 | - | - | 0.07 | - | - | - | 0.75 | -0.17 | 0.26 | - | - | -1.27 | - | - | |
| -1.44 | 1.17 | -2.86 | -0.76 | - | - | -2.47 | 0.31 | -0.17 | -3.76 | -1.42 | -2.35 | -1.29 | -0.29 | -1.45 | - | -3.33 | 2.98 | -1.87 | - | 3.77 | - | - | -1.83 | -0.43 | - | -0.01 | - | -2.59 | - | - | - | |
| 0.36 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 3.41 | -0.16 | - | - | - | 2.56 | 0.54 | - | 2.72 | -10.05 | - | 1.49 | 1.28 | - | - | |
| -1.0 | -1.23 | - | -0.67 | -2.0 | - | -1.19 | -2.35 | -1.28 | -1.45 | -0.22 | -0.59 | - | -0.6 | 0.04 | -0.38 | -1.1 | 4.01 | 1.41 | - | 0.25 | - | -1.12 | 0.4 | - | - | -0.83 | - | -0.59 | -0.55 | -1.15 | -2.23 | |
| -1.48 | -0.58 | -0.66 | -1.06 | -0.53 | -0.34 | 0.24 | 0.21 | -0.0 | -0.83 | -1.56 | -0.99 | -5.03 | -5.02 | -1.91 | -4.01 | -1.67 | 2.58 | 1.63 | - | - | - | -0.88 | 0.03 | -0.93 | 0.54 | 2.16 | 2.02 | -0.7 | -0.46 | -1.3 | -4.27 | |
| -2.46 | -1.33 | -2.15 | -1.41 | -3.64 | -1.91 | -1.21 | -4.02 | -2.87 | -1.45 | -1.53 | -1.82 | -3.26 | 2.26 | -1.54 | 0.73 | 0.2 | 3.3 | -1.87 | - | - | - | 0.46 | 0.74 | -4.2 | -4.63 | -0.9 | -1.34 | 0.07 | 0.96 | 0.53 | 1.08 | |
| -0.08 | -0.01 | -0.35 | 0.09 | 0.05 | -0.02 | 0.08 | 0.34 | 0.31 | 0.37 | 0.09 | 0.1 | -0.33 | -0.25 | -0.32 | -0.4 | -0.97 | 2.15 | 0.23 | -4.22 | -0.48 | -3.05 | -0.51 | -0.32 | -0.83 | 0.11 | 0.41 | 0.51 | -0.52 | -0.36 | -0.29 | -0.34 | |
| - | - | - | - | - | - | -0.17 | - | - | - | - | - | 0.77 | -0.11 | - | -0.58 | - | 4.58 | 1.49 | - | - | - | - | -0.97 | - | - | - | - | - | - | -0.8 | - | |
| - | 1.3 | - | - | - | 1.41 | - | - | -0.62 | -1.16 | - | - | - | - | - | -0.17 | - | 1.62 | 2.6 | 1.88 | 3.2 | - | -0.3 | - | - | - | - | - | - | - | 1.04 | - |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.