Heatmap: Cluster_161 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg cell
Ovule
Uninucleate microspore (Col-0)
Uninucleate microspore (Ler-0)
Pollen (bicellular, Col-0)
Pollen (late bicellular, Col-0)
Pollen (bicellular, Ler-0)
Pollen (tricellular, Col-0)
Pollen (tricellular, Ler-0)
Pollen (mature, Col-0)
Pollen (mature, Ler-0)
Sperm
Pollen tube (Col-0)
Flower (receptacles)
Flower (floral buds)
Flower (sepals)
Flower (petals)
Flower (stamen filaments)
Flower (anthers)
Flower (carpels)
Flower (stigmatic tissue)
Pedicel
Axis of the inflorescence
Silique
Silique (senescent)
Pods of siliques
Pods of siliques (senescent)
Embryo
Endosperm
Seed
Seed (young)
Seed (germinating)
Seedling
Seedling (etiolated)
Meristem
Stem (internode)
Stem (internode, senescent)
Stems
Leaf (rosette)
Epidermis cells
Mature guard cells
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
Root (apex)
Root (stele)
Root (QC cells)
Root (tip)
AT1G10010 (AAP8)
0.68 2.79 - -2.44 - - -4.1 -6.73 -4.23 -5.85 -6.23 -1.22 -2.39 0.04 -2.12 - -5.32 - -3.3 0.1 - -6.14 - 0.42 -5.52 -2.25 -4.73 -6.07 4.72 - 2.98 -4.81 -8.59 -6.06 -4.44 -4.61 - -6.81 -6.6 -4.41 -6.01 -5.19 - - -6.09 - - -
-0.31 2.02 - - - - - - - - - - - 1.7 -1.05 -4.9 - -3.07 - -0.27 -5.06 - - 2.75 -3.26 0.75 -5.06 - 4.05 -5.79 3.29 -3.26 -3.49 -1.51 -0.94 - - 1.16 -3.47 - - - - - -3.84 - - -
0.6 2.59 -0.9 -0.2 0.67 0.34 -0.41 -3.94 -6.82 -6.41 -5.54 - - 0.79 -3.1 -7.51 - - - -0.21 -6.85 - -4.9 2.46 -2.57 -0.1 - - 4.18 -2.89 2.89 -7.3 -6.2 -2.91 -4.63 -6.48 - -5.0 -5.02 - - -3.91 -6.41 - -5.4 - - -6.5
AT1G17800 (ENODL22)
- - - - - - - - 0.43 - 2.38 - -0.05 -1.81 - - - - - - - - - 3.55 - -0.87 - - 4.57 - 2.05 - - - - - - - - - - - - - - - - -
AT1G21430 (YUC11)
0.13 -2.46 -1.87 0.3 -0.29 - -1.04 - -2.04 - - - -0.53 -3.71 - - - - -2.57 -1.52 - - - -0.43 -2.08 -1.77 - - 3.63 - 4.16 - - - - 0.33 -0.26 -5.16 - 3.06 - - -1.59 - - - - -
AT1G21850 (sks8)
- -4.07 -2.49 -3.48 -1.87 -4.6 -2.29 -6.35 - -5.43 -4.88 -5.08 -3.29 2.33 - - -6.0 -5.19 -5.92 -5.43 - -5.76 - 1.09 - -5.56 -5.93 -5.69 4.43 - 4.15 -7.81 -6.31 -5.83 -5.46 -5.79 - -6.05 -9.42 - - -2.49 -5.72 - -5.71 - -8.38 -5.86
AT1G28450 (AGL58)
- - -1.44 - -0.99 -1.87 - - - - - - - -3.42 - - - - -1.01 -4.02 - - - 2.85 - -0.31 - - 4.38 - 0.98 -3.04 1.07 1.88 -6.27 -1.39 - -1.64 -3.53 - - 1.61 1.28 - 1.7 - - -
AT1G29962 (AGL64)
1.13 -1.09 2.05 -1.88 -1.19 -2.35 - - - -3.45 -2.44 - - 0.15 - - -0.95 - 0.26 -2.21 - - -0.89 2.71 - -1.1 -1.74 -0.75 3.87 -1.34 3.16 - -2.59 -1.6 -2.88 -0.28 -1.04 -2.32 -0.83 0.17 - - -0.78 - - - -3.98 -2.88
AT1G43640 (TLP5)
-0.62 1.78 1.92 -0.26 1.01 -1.77 -0.78 -6.39 -7.0 -6.56 -7.2 -7.59 -1.01 0.17 -0.7 -5.09 -3.91 -6.54 -3.58 0.11 -1.32 -7.36 -9.48 2.48 -3.62 1.1 -0.37 -2.92 3.98 -5.5 2.95 -6.17 -8.7 -5.57 -7.4 -5.46 -3.82 -5.47 -5.88 - - -7.46 -7.38 - -6.56 - - -9.58
-1.85 2.71 - - - - - - - - - - - 2.41 -4.61 - -5.76 - -6.45 -1.55 -5.81 - -5.7 2.36 - -0.53 - - 4.22 - 3.46 - - -5.61 - - - - - - - - - - - - - -
- 2.94 - - - -2.67 -1.89 - - - - - -0.33 0.86 -1.21 - - - - 0.51 -4.41 - - 2.42 -3.11 0.47 -4.16 - 2.78 - 4.43 -6.71 - -3.53 - - - -7.49 - - - - - - - - - -
- -3.12 -3.48 - - - - - - -6.03 - - - 1.43 - -4.82 -4.77 - - -6.93 - - -4.71 2.47 - -0.99 - - 4.54 - 3.97 - - - -6.75 - - -10.52 - - - - - - - - - -
-3.66 2.17 - - - - - - - - - - - 1.01 - -5.23 - - - -2.47 - - - 1.04 - -2.15 -3.11 - 4.44 - 4.01 - - -6.06 - - - -6.93 - - - - - - - 0.02 - -
-3.63 - -0.22 1.47 -0.84 0.84 1.25 -2.86 -1.7 -3.93 -0.14 1.75 -3.04 -1.25 - - - - -0.86 -5.32 - - - -0.21 - -4.49 - - 4.67 - 2.82 - - -1.79 - - - -7.94 -5.05 - - - - - - - - -
- 0.69 - -3.16 - -5.22 -2.66 - - - - - -4.52 -0.69 -2.67 - - - -2.98 -1.08 - -3.41 - -0.04 - -1.85 -4.62 - 4.02 - 1.45 -1.05 -5.44 1.42 - - - -4.18 - - - 3.39 3.12 -0.16 -2.33 - - -0.19
AT1G73607 (LCR65)
-0.76 2.69 - - - - - - - - -3.96 - - 1.97 - - - - - -1.28 -5.22 - - 1.06 - -1.39 -3.85 -4.74 4.11 - 4.05 - - -5.33 - - - -9.47 -5.75 - - - - - - - - -
-6.29 0.52 - -5.57 - - - - -7.03 - - - - 1.57 -3.27 - - - - -1.45 -7.02 - - 1.08 -7.07 -1.89 -5.11 -5.54 4.94 - 2.99 -8.31 -6.82 -0.88 -10.58 - - -7.83 -0.14 - - -4.66 -3.99 -1.82 -3.12 - - -2.87
- 3.06 -0.83 - - - - - - - - - - 0.87 - - - - - -1.07 - - - 2.58 -0.76 -1.42 - - 4.25 -1.11 3.33 - - - - -1.36 - - - - - - - - - - - -
AT1G78710 (TBL42)
-3.12 2.47 -1.58 -1.05 -2.6 - -0.46 - - - -5.08 -5.6 - 0.48 1.55 - -3.12 -5.3 -2.99 1.15 - - - 1.96 -5.39 -0.74 -4.86 - 4.21 - 3.27 -2.14 - -5.56 -6.74 - - -5.92 -3.88 -2.62 - -2.98 -1.59 - - - - -2.62
0.66 2.47 - -7.29 - - - -6.21 - - - - - -1.73 - - - -6.0 -5.46 1.11 - - -7.19 2.76 -5.45 0.54 - - 4.19 - 3.42 -7.03 - -5.9 -8.85 -6.25 - -10.65 -8.6 - - - - - - 0.13 - -7.37
3.03 3.64 - - - - - - - - - - - -0.09 - - - - - 0.63 - - - 0.06 - - - - 3.33 - 3.76 - - - -3.19 - - - - - - - - - - - - -
3.42 4.44 - - - - - - - - - - - 3.33 - - - - - 0.53 - - - -3.08 - - - - - - 1.99 - - - - - - - - - - - - - - - - -
- 2.85 - 0.99 0.3 -0.09 - 0.44 - - - - 0.69 1.89 - - - - -2.18 0.5 - - - 1.5 - -1.61 - - 3.0 - 4.1 - - - - - - - - - - - - - - - - -
AT2G19510 (LBD8)
-1.78 -0.2 - - - - - - - -2.17 - - - 1.03 - - - - - -0.99 - - - 2.74 - 0.22 - - 4.5 - 3.74 - - -2.78 - - - - - - - - - - - - - -
0.86 3.42 - - - - - - -5.41 - - - - 1.04 - - - -5.36 -6.61 0.46 -5.16 - -4.97 2.17 - -0.52 - - 4.1 - 3.25 - - -3.83 -8.74 - - - - - - -4.04 - - - - - -
1.85 3.1 -5.84 -5.67 - - - -2.89 -3.63 -3.93 -3.55 -5.77 -2.52 -1.31 -1.4 -5.04 -3.21 -4.38 -3.3 0.92 -4.18 - - 1.49 -2.83 -0.28 -3.7 -3.94 4.15 -2.91 3.23 -3.37 -2.73 -1.42 -6.61 - -5.81 -4.15 -9.03 - - -4.64 -5.55 -4.97 -3.97 - - -2.82
- - 1.27 - 1.86 - -0.76 - - - - -1.35 - 0.02 - -1.42 -0.48 - - -2.35 - - - 1.96 - - - - 4.62 - 3.08 -0.12 - -1.31 - - - -1.36 - - - - - - - - - -
0.46 3.0 - - - - - - - - - - - 1.57 - - - - -2.47 -0.69 - - - -1.65 - - - - 4.17 - 4.04 -4.11 - -4.53 - - - - -7.06 - - - - - - - - -
1.14 2.42 -8.17 -6.89 - - - - - - -8.02 -7.16 - 1.73 -1.07 -6.94 - - -6.4 0.51 -5.82 - -6.38 2.59 -8.38 0.28 -4.11 -5.27 3.5 - 4.05 -7.88 - -5.12 -10.81 -6.38 -7.15 - - - - -6.98 -7.89 - -7.88 - - -
AT3G21850 (SK9)
- -5.14 - - - - - - - - - - - -5.01 - -5.15 - - 2.91 -7.22 -4.96 -5.15 -4.09 3.58 - 0.65 - -3.32 4.63 -7.06 0.64 -6.72 - - -7.53 -4.14 - -4.36 -7.98 - - -4.72 -13.39 -3.04 -5.62 - - -
-0.34 2.47 -4.68 - - - - -3.3 -4.97 - - 0.36 -3.9 0.23 - -2.48 -1.2 -1.96 -6.58 0.62 - -5.07 -2.3 1.85 -4.04 -0.99 -4.51 - 4.02 - 3.88 -4.44 -4.52 -2.68 -0.92 - -4.81 -2.5 -5.09 - - -3.64 - - -3.54 - - -
- -4.67 - -1.73 - - - - - - - - 0.36 -1.01 - - - - - -6.11 - - - 3.21 - -1.4 - - 4.66 - 3.35 -5.4 -3.9 -1.45 - - - -3.73 -5.24 - - - - - -2.31 - - -
1.98 1.48 -2.26 -2.11 -1.97 - - - -3.5 - - 0.53 -5.02 -1.53 -3.1 - - - -3.47 0.45 - - - 1.98 -3.58 -0.55 -3.3 -4.05 3.99 - 3.99 -5.26 -4.43 - -6.04 - -4.06 -7.63 - - - -3.17 -4.11 -3.5 -4.08 - - -5.27
-2.46 2.26 -4.37 - - - - - - - - - - -1.62 0.76 -3.33 - - -3.19 0.95 - - - 1.56 - 0.36 -2.43 -2.19 4.7 -5.69 3.02 - - - - - - - - - - - - - -3.8 - - -
-2.57 -3.77 -1.23 -0.73 -2.8 -2.72 0.13 -1.88 - - - 0.09 -1.19 -0.11 - - - - -0.52 -3.47 - - - 1.52 - -0.01 -0.71 -0.63 4.91 - 2.02 - -3.16 0.25 - -2.34 -2.22 -3.77 - - - - - - -0.25 - - -
AT3G61172 (LCR8)
1.0 2.73 - - - - - - -0.6 -1.87 - -4.37 - 3.18 - - - - -1.17 -0.46 - - - 1.86 - 1.27 0.77 - 3.53 - 2.91 - - 0.27 - - - -2.63 - - - - - - - - - -
AT4G11510 (RALFL28)
0.95 3.32 - - - - -3.11 - -3.41 - -4.24 - -4.9 1.69 - - - -4.52 - -0.23 - - - 0.86 - -2.67 -1.52 - 4.1 - 3.6 -5.29 -6.6 -6.43 - - - -7.57 -5.32 - - - - - - - - -
0.81 2.36 - - - - -2.46 - - - - - - 1.25 -2.03 - - - - -0.07 - - - 2.33 - 0.37 - - 3.75 - 4.13 -5.1 - - - - - - - - - - - - - - - -
1.12 3.45 - -3.63 - - - - - - -4.17 - - 1.33 0.28 - - -3.92 - 1.39 - - - -0.09 - -2.7 - - 3.9 - 3.62 - - -3.47 - - - - - - - - - - - - - -
-0.26 1.71 -5.75 -6.42 - -6.89 - - - -8.02 - - - 1.94 -3.7 - - - - -0.48 - - - 0.34 -6.91 -3.66 - -4.39 4.52 - 3.85 -8.15 -7.11 -1.65 -6.88 - - -5.27 - - - - - - - - - -
0.19 -2.01 -5.3 -2.16 - - -5.18 - -4.19 -5.55 -2.25 - 3.52 2.03 -3.75 - - - -6.44 -1.37 - - - 0.19 - -2.7 - - 4.44 - 2.8 - -7.23 -3.5 - - - -8.21 -8.68 - - - - - - - - -
AT4G30070 (LCR59)
2.76 1.85 - -2.4 -3.96 - -2.4 - - - - - - 0.44 0.39 - - -3.95 -2.79 0.52 - - - 1.22 - -1.45 -3.62 - 4.38 - 3.18 - - - -5.81 - - - - - - -2.49 - - - - - -
-5.61 -4.03 - - - - - - - - -4.85 - -5.61 1.37 - - - - -2.53 -5.83 -4.88 - - 3.16 - -0.24 - - 4.59 - 3.47 -6.76 - - -8.64 -3.75 - -7.09 - - - - - - - - - -
AT4G39000 (GH9B17)
0.37 2.46 -3.08 -6.28 -3.14 -6.61 -6.23 -8.39 - - -7.89 -4.7 - -1.2 -0.46 -4.47 -4.77 -4.58 0.15 1.22 -5.79 -6.28 -7.87 -0.98 -8.11 -3.57 -5.6 -7.73 4.71 - 2.83 -5.82 -6.16 -4.73 -7.97 -5.26 -8.02 -7.2 -9.88 - - -0.62 -2.81 - 0.33 - - -8.95
0.13 0.68 2.02 0.09 0.57 -2.05 -0.11 - -6.91 -6.17 -5.28 - -5.47 -0.34 -5.58 - - -8.69 -3.98 -1.56 -6.85 - - 2.15 -5.01 -1.49 -2.74 -8.11 3.96 -7.2 3.23 -2.13 -2.19 -1.35 -8.2 -8.23 -7.25 -2.06 -5.97 - - 2.26 -3.98 -5.24 -1.8 - - -4.85
-2.47 2.55 - - - - -3.79 - - - - - - 0.51 - - - - -5.37 -0.27 - - - 2.31 - -0.29 -3.95 - 4.16 - 3.99 - - - - - - - - - - - - - - - - -
AT5G35550 (TT2)
-2.83 0.28 - -5.66 -4.91 -4.69 -4.24 - - -6.97 - - - 0.88 -1.65 -7.87 -5.71 -2.43 -6.18 -2.03 -2.95 -2.33 -3.63 2.67 - -0.04 - -5.51 4.61 -8.38 3.48 -6.82 - -4.32 -7.97 -2.45 -5.8 -3.15 -6.57 - - -5.63 - - -3.54 - - -
-0.87 4.14 - -0.56 - -0.91 - - - - - - - -1.78 - - - - - 1.29 - - - -0.2 - - - - 4.08 -2.33 2.89 - - -1.13 - - - - - - - - - - - - - -
-3.48 1.22 - -4.87 -3.86 -1.81 -6.66 -1.15 -1.3 -1.92 -2.09 3.46 -0.88 -1.13 -1.92 - - - -3.31 -1.01 -6.82 - - 1.37 - -0.74 -4.09 -3.58 4.53 - 1.93 -3.85 - -2.39 - -6.68 - -11.78 -10.33 - - -2.89 -4.61 - -1.8 - - -
0.88 -2.35 -0.74 -1.0 -0.61 -2.46 -1.86 -3.37 -3.98 -6.7 -7.61 -7.35 -4.32 1.5 -3.64 -4.93 -5.32 -6.91 -4.57 -2.93 -7.65 -4.72 -4.48 1.68 -3.83 -1.33 0.32 -1.81 4.51 -6.53 2.63 -5.77 -5.27 -3.91 -6.28 -4.71 -5.25 -2.31 -2.71 -1.37 2.28 -2.71 -4.27 -3.52 -6.42 - - -6.02
0.43 2.12 0.91 -2.33 0.09 -6.02 -1.44 - - -6.89 - -6.17 -5.24 -0.12 -0.89 -2.79 -2.55 -4.32 -2.22 0.82 -2.3 -5.98 -3.98 2.34 - 0.21 -5.67 -3.84 4.27 -6.29 3.04 -5.03 -2.65 -4.44 -4.63 -1.46 -4.72 -3.9 -5.11 - -5.12 - -5.48 - - - - -6.64
0.16 2.48 -0.82 -1.29 -1.5 -3.24 -1.41 -3.91 -4.26 -5.39 -4.58 -1.48 -4.51 0.65 1.37 -7.08 - -8.15 -3.03 2.31 -3.59 -7.54 -7.77 1.85 -3.04 0.76 0.51 -5.08 3.58 -7.46 3.4 -8.14 -8.62 - -8.16 -7.37 -3.78 -4.07 -13.06 -7.74 - - - -8.7 -6.47 - - -9.44
1.28 1.86 - 2.16 - - 1.25 - - - - - - 0.42 -2.8 -6.12 - - -4.91 -0.95 - -5.31 - 1.17 - -1.43 - -3.76 4.33 -5.65 2.83 - -1.7 -4.71 -4.17 0.37 -2.41 -0.17 -2.5 - - - -2.49 - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.