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Heatmap: Cluster_172 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
-0.23 -0.35 0.1 0.61 0.71 0.67 0.65 0.84 0.65 0.57 0.27 -0.06 -2.14 -1.92 -6.02 -2.37 -0.07 -3.76 0.39 -3.72 -1.58 -6.04 -0.04 -0.03 -0.24 1.98 0.31 -0.3 0.16 0.03 -0.31 -0.43
-0.23 -0.32 0.13 0.58 0.61 0.46 0.6 0.82 0.63 0.63 0.35 0.15 -1.8 -2.02 -6.3 -1.87 -0.21 -0.23 0.42 -4.07 -1.8 -7.21 -0.18 -0.24 -0.46 2.03 0.26 -0.17 0.0 -0.13 -0.51 -0.69
0.42 1.07 1.14 0.89 1.24 1.22 0.5 1.08 -0.24 0.2 0.86 0.45 - -1.12 -0.99 - - -2.35 -1.23 - - - - -4.9 -2.25 1.76 0.9 1.21 -4.27 - -0.46 -0.07
0.48 -0.21 1.07 0.82 1.08 0.94 0.78 1.28 1.32 0.93 1.58 0.74 - -0.17 -0.36 - - - -4.16 - - - - -5.68 -3.63 1.64 0.68 1.06 - - - -
0.61 0.52 0.31 0.08 0.35 0.37 0.43 0.18 -0.02 0.5 0.55 0.43 -0.98 -0.6 0.07 -0.85 -0.85 -1.57 -0.57 -2.7 -6.52 -0.56 -1.04 -1.07 -1.67 1.8 1.08 1.34 -0.62 -0.69 -1.83 -1.59
0.26 0.36 0.19 0.44 0.54 0.33 0.43 0.42 0.39 0.35 0.43 0.39 -1.66 -1.2 -0.35 -0.94 -0.15 -0.53 -0.46 -1.75 -1.0 -0.85 -0.88 -1.25 0.3 0.75 0.97 1.0 -0.31 -0.21 -0.6 -1.06
0.33 0.24 0.27 0.15 0.3 0.38 0.46 0.5 0.45 0.58 0.58 0.38 -0.21 -0.67 -0.57 -0.31 -0.82 -0.77 -0.39 -0.62 -2.4 -1.13 -0.68 -0.61 -1.1 1.07 0.77 0.81 -0.52 -0.54 -0.56 -0.46
0.22 -0.19 -0.33 -0.12 0.1 -0.01 0.08 0.34 0.28 0.31 0.5 0.27 -0.47 -1.04 -1.05 -0.35 -0.99 -1.65 -0.7 -1.41 -0.64 -0.8 -0.63 -0.46 0.86 2.05 1.04 0.98 -0.99 -1.07 -0.97 -1.17
0.29 0.29 0.31 0.2 0.27 0.23 0.2 0.32 0.2 0.38 0.36 0.16 -0.29 -0.43 -0.21 -0.1 -0.74 -1.39 -0.2 -1.04 -0.5 -0.22 -0.59 -0.55 -0.46 1.04 0.81 0.85 -0.33 -0.29 -1.03 -1.02
-0.13 -0.23 -0.36 -0.14 -0.05 -0.05 0.27 0.58 0.57 0.6 0.5 0.47 -0.54 -1.28 -0.08 -0.25 -0.69 -1.04 0.13 -1.54 -2.45 -1.33 -0.39 -0.19 -1.2 1.63 0.84 0.89 -0.1 -0.06 -0.48 -0.53
-0.1 -0.14 0.02 0.12 0.08 -0.04 0.01 0.37 0.41 0.43 0.41 0.14 -0.09 -0.21 -0.47 -0.48 -1.05 -3.54 -0.37 -1.32 -1.4 -4.02 -0.97 -0.64 0.32 1.91 1.25 1.21 -0.59 -0.64 -0.77 -1.09
-0.17 -0.01 0.71 0.82 0.56 0.28 0.46 1.21 0.9 1.0 0.91 0.78 -1.94 -2.3 -4.27 -2.65 -1.41 -4.14 -1.72 -2.49 -0.38 -8.65 -1.34 -1.56 0.31 1.83 0.71 0.58 -0.83 -0.96 -1.44 -1.33
-0.34 -0.12 0.57 0.71 0.33 0.3 0.51 0.88 0.81 0.83 0.63 0.5 -1.34 -0.74 -3.51 -1.62 -0.46 -2.12 -1.63 -3.51 -1.63 -7.79 0.02 -0.47 -0.15 1.4 0.99 0.81 -0.2 -0.35 -0.86 -0.73
0.6 0.59 0.07 0.62 0.99 0.71 0.28 0.72 0.57 0.99 0.71 0.53 -1.62 -1.18 -0.64 -1.38 -1.9 -3.67 -1.51 -4.13 - - -1.65 -1.45 -2.03 1.89 1.31 1.45 -1.76 -1.71 -2.5 -2.31
-0.2 -0.52 -0.18 -0.21 -0.07 -0.19 0.03 0.48 0.71 0.52 0.54 0.43 -0.54 -2.28 -1.64 -0.41 -0.29 -0.58 0.07 -3.54 -3.32 -3.1 -0.43 -0.31 -2.41 1.66 1.18 1.28 0.27 0.18 -0.14 -0.12
0.59 0.06 0.46 0.49 0.39 0.23 0.56 0.64 0.04 0.52 0.83 0.06 -2.14 -0.0 0.58 -2.5 -3.34 -3.37 -2.9 - -2.18 - -2.81 -3.16 -2.38 1.73 1.7 2.36 -4.18 -3.39 -3.86 -3.51
0.65 0.61 0.45 0.81 0.89 0.81 0.38 0.59 0.86 0.78 0.68 0.83 -4.8 -1.68 -2.79 -4.74 -4.45 -0.83 -3.61 - -5.15 - -4.45 -3.83 -5.39 1.66 2.07 1.84 -4.71 -5.91 -4.71 -5.58
-0.17 0.22 0.36 0.25 -0.14 0.66 0.62 1.22 0.65 0.96 0.88 0.67 -5.02 -5.32 -3.62 -5.03 -0.77 -3.15 0.11 - - - 0.42 -0.86 -1.74 2.42 -0.25 0.59 -0.56 -0.09 -1.31 -1.59
0.04 -0.24 0.1 0.08 0.23 0.27 0.26 0.6 0.56 0.56 0.63 0.17 -0.51 -0.78 -0.51 -0.39 -0.65 -0.58 0.0 -1.17 -0.52 -2.0 -0.59 -0.52 -1.61 1.54 0.64 0.94 -0.54 -0.27 -0.83 -0.55
0.09 -0.05 0.01 0.28 0.18 0.36 0.84 0.61 0.56 1.03 0.42 0.47 -1.64 -0.49 -0.17 -1.9 -3.34 -3.01 -1.49 -5.89 - - -2.2 -2.47 -3.16 2.35 1.69 1.92 -3.31 -3.34 -3.27 -3.71
0.7 1.2 1.28 1.05 0.61 1.13 1.09 0.69 0.91 1.03 1.06 0.46 - - - -6.14 -5.73 - - - - - - -5.77 -2.14 1.57 1.05 1.76 -7.46 -5.77 -7.39 -
-0.03 0.09 0.15 0.06 0.13 -0.03 0.51 0.63 0.44 0.66 0.54 0.21 -0.49 -0.5 -1.39 0.13 -0.46 -0.95 -0.29 -2.94 -1.71 -3.07 -0.61 -0.45 -1.5 1.3 1.05 1.18 -0.15 -0.17 -0.42 -0.67
0.56 0.29 0.42 0.42 0.51 0.2 0.07 0.39 0.47 0.57 0.6 0.66 0.38 -0.71 -1.49 -0.02 -1.04 -0.93 -0.69 -3.5 -0.74 -0.73 -0.54 -0.36 -0.92 1.01 0.78 0.52 -0.94 -0.99 -0.79 -0.35
0.3 -0.07 -0.33 -0.1 -0.11 -0.29 -0.19 0.02 0.08 0.05 0.18 0.35 -0.31 -1.29 -0.24 -0.12 -0.81 -0.76 -0.16 -1.49 -1.25 -0.54 -0.77 -0.87 0.34 1.97 1.13 1.15 -0.72 -0.61 -0.52 -0.4
-0.8 -0.97 0.28 0.7 0.71 0.65 0.63 1.25 0.67 0.49 0.06 -0.48 -4.37 -5.61 -6.42 -4.55 -1.11 -2.81 -1.93 -4.42 -0.24 -4.77 -1.45 -2.42 1.21 2.46 1.29 0.7 -1.05 -1.8 -0.55 -1.56
0.55 0.48 0.64 0.59 0.84 0.71 0.51 0.65 0.63 0.65 0.83 0.61 0.02 -0.62 -1.42 -0.66 -2.38 -1.41 -1.99 -2.02 -2.09 - -1.15 -1.01 -0.34 1.54 1.1 0.62 -2.51 -2.09 -2.04 -1.77
0.65 0.35 0.46 0.45 0.11 0.19 0.54 0.54 0.78 1.0 0.88 0.73 -2.08 -0.66 -0.23 -2.36 -1.81 -2.63 -1.4 -0.6 -3.24 -5.98 -1.76 -1.45 -2.09 1.84 0.94 1.13 -1.3 -1.22 -1.18 -0.6
0.44 0.67 0.15 0.55 0.26 0.56 0.37 0.24 0.24 0.47 -0.18 0.34 -0.65 -1.11 -0.64 -0.5 -0.8 -0.53 -0.03 0.16 -5.97 -1.25 -0.57 -0.76 -2.86 0.89 1.3 1.15 -0.76 -0.74 -0.68 -0.69
-0.62 -0.41 0.39 0.42 1.03 -0.2 0.02 0.96 1.11 1.1 0.71 0.73 -2.23 -2.67 -4.08 -3.28 -0.93 -1.27 -0.83 - - - -1.35 -1.75 -1.83 2.4 0.73 -0.21 -0.22 -0.85 0.28 0.06
0.21 0.1 0.21 0.23 0.31 0.24 0.4 0.25 0.18 0.26 0.11 0.07 -0.26 -0.71 -0.21 -0.32 -0.72 -1.02 -0.12 -2.47 -1.36 -0.48 -0.54 -0.7 -0.74 1.12 1.26 1.3 -0.67 -0.45 -0.57 -0.59
0.52 0.49 0.84 0.9 0.71 0.37 0.2 0.24 0.32 0.57 0.69 0.53 0.11 -0.07 -0.93 -0.05 -0.94 -1.54 -0.68 -5.47 -1.32 -3.97 -0.62 -0.63 -1.58 1.02 0.8 0.66 -1.63 -1.19 -1.08 -0.45
-0.12 -0.07 0.04 0.08 0.02 0.18 0.33 0.47 0.53 0.61 0.42 0.34 -0.57 -0.79 0.27 -0.55 -1.32 -1.06 -0.36 -0.98 -1.73 -0.21 -1.09 -0.8 -2.59 1.68 1.13 1.06 -0.92 -0.86 -0.61 -0.39
0.15 0.18 0.08 0.0 0.18 0.19 0.29 0.42 0.23 0.23 0.18 0.17 -0.16 -0.93 -2.13 -0.31 -0.3 -0.33 -0.25 -3.96 -1.19 -1.28 -0.42 -0.62 -0.87 1.26 1.05 1.17 -0.08 -0.1 -0.08 -0.06
0.36 0.08 -0.02 0.32 0.05 0.2 -0.19 0.11 0.14 0.2 0.3 0.22 -0.85 -0.64 -0.57 -0.32 -0.35 -1.84 0.05 - -3.69 - -0.06 -0.3 -1.54 1.73 1.23 1.29 -0.42 -0.53 -0.09 0.24
0.46 0.32 0.62 0.56 0.93 0.52 0.38 0.67 0.55 0.23 0.61 0.73 -1.17 -0.24 -0.24 -0.97 -1.19 -0.59 -1.17 -0.98 -0.62 -2.2 -1.28 -1.25 -0.72 1.13 0.88 0.57 -1.44 -0.82 -1.11 -1.34
0.41 -0.81 0.0 -0.57 0.38 0.22 0.04 1.04 0.53 0.86 0.44 0.46 -2.79 -3.09 -0.82 -1.59 -1.32 -2.11 -1.17 -3.01 -3.53 - -1.4 -1.31 -0.65 2.33 1.64 1.38 -1.09 -0.94 -0.98 -0.37
0.65 0.02 0.0 0.76 0.81 0.94 0.69 1.27 1.04 0.88 0.84 0.78 -7.45 -1.21 -1.83 -5.32 -4.7 -5.48 -4.99 -2.2 -3.89 - -5.45 -4.38 -1.36 2.08 1.42 1.6 -6.08 -4.12 -5.29 -6.7
-0.61 0.36 0.68 0.8 0.22 0.14 1.19 1.05 0.94 1.08 0.7 0.53 -0.95 -1.82 -1.28 -1.58 -1.27 -2.82 -0.77 - -4.22 -3.11 -1.13 -1.34 -0.21 1.34 0.99 0.95 -0.96 -1.09 -1.15 -0.93
0.21 0.13 0.28 0.16 0.23 0.1 0.42 0.41 0.44 0.55 0.47 0.32 -0.06 -0.52 -0.1 -0.01 -0.64 -0.71 -0.14 -1.47 -2.68 -1.43 -0.45 -0.51 -1.51 1.31 0.72 0.9 -0.15 -0.09 -1.37 -1.2
0.07 0.14 0.24 0.17 0.32 0.2 0.47 0.26 0.22 0.26 0.36 0.12 -0.89 -1.08 0.1 -0.64 -0.64 -0.89 -0.43 -0.29 -1.85 -1.05 -1.09 -1.14 -0.91 1.31 1.38 1.51 -0.73 -0.72 -0.95 -1.01
0.04 0.03 -0.03 0.09 0.08 0.1 0.14 -0.02 -0.04 0.04 0.03 -0.06 -0.25 -0.57 0.13 -0.02 -0.4 -0.88 0.23 -1.34 -1.24 0.06 -0.18 -0.09 -1.4 1.24 1.05 1.03 -0.23 -0.36 -0.5 -0.4
0.53 0.34 0.09 0.25 0.47 0.38 0.15 0.19 0.22 0.42 0.11 0.16 0.03 -0.61 0.04 0.11 -0.73 -0.59 0.23 -0.74 -1.39 -0.33 -0.56 -0.45 -0.85 0.81 0.8 0.68 -0.48 -0.49 -1.08 -1.11
0.08 -0.06 -0.07 -0.01 -0.03 -0.27 0.19 0.43 0.52 0.68 0.65 0.49 -0.55 -1.21 -0.93 -0.09 -0.81 -1.8 -0.09 -2.33 -9.83 -6.73 -0.24 -0.17 -6.53 1.91 0.86 0.88 -0.12 -0.18 0.09 0.14
-0.01 -0.06 -0.01 0.05 0.12 0.02 0.23 0.46 0.34 0.42 0.39 0.31 -0.24 -0.72 -0.77 -0.26 -0.71 -1.29 -0.14 -3.02 -2.81 -2.18 -0.28 -0.28 -0.72 1.6 1.18 1.07 -0.42 -0.35 -0.17 -0.21
0.17 0.03 0.04 0.23 0.25 0.11 0.31 0.48 0.5 0.58 0.54 0.39 -0.61 -0.37 -0.01 -0.59 -0.92 -1.56 -0.72 -1.18 -2.37 -1.34 -0.72 -0.75 -0.93 1.2 1.24 1.29 -0.74 -0.73 -0.57 -0.38
0.13 -0.01 0.03 0.11 0.32 0.06 0.12 0.55 0.38 0.56 0.58 0.27 -0.08 -0.68 -0.83 -0.09 -0.73 -1.22 -0.18 -2.48 -2.0 -1.61 -0.44 -0.44 -2.27 1.33 1.14 1.18 -0.47 -0.53 -0.36 -0.16
-0.43 -0.45 -0.46 -0.13 -0.14 -0.21 0.25 0.66 0.55 0.74 0.72 0.56 -0.06 -0.41 -0.41 0.04 -0.88 -1.23 0.06 - -5.17 -7.08 -0.58 -0.44 -1.9 1.75 1.17 1.1 -0.28 -0.32 -0.48 -0.35
0.06 -0.25 -0.35 -0.03 -0.01 -0.12 0.27 0.57 0.6 0.64 0.64 0.51 -0.64 -1.47 -1.56 -0.48 -0.78 -1.57 -0.51 -4.27 -2.92 -4.11 -0.68 -0.71 -1.14 2.07 1.25 1.27 -0.41 -0.43 -0.28 -0.36
0.38 0.22 0.2 0.13 0.37 0.15 0.35 0.38 0.55 0.69 0.54 0.44 0.01 -0.7 -0.42 -0.05 -0.74 -0.74 -0.21 -2.01 -4.42 -3.46 -0.68 -0.63 -1.83 1.48 0.76 0.79 -0.6 -0.6 -0.42 -0.3
-0.05 -0.01 -0.4 -0.05 0.07 -0.02 -0.1 0.01 0.14 0.09 0.02 0.07 -0.34 -1.53 -0.66 -0.38 -0.66 -3.87 0.22 -1.37 -1.9 -2.16 -0.22 -0.04 0.61 2.02 1.3 1.18 -0.58 -0.69 -0.45 -0.66
0.31 -0.12 -0.6 -0.3 -0.23 -0.33 -0.18 0.27 0.43 0.72 0.95 0.86 -0.55 -1.79 -2.12 -0.38 -0.61 -2.21 -0.65 -2.5 -1.95 -2.12 -0.53 -0.6 -0.67 2.08 1.32 1.26 -0.37 -0.37 -0.84 -0.92
0.23 0.19 0.08 0.17 0.28 0.28 0.39 0.6 0.57 0.55 0.53 0.29 -0.98 -0.75 -0.62 -0.75 -0.76 -0.83 -0.24 -0.89 -1.49 -3.5 -0.51 -0.32 -1.54 1.51 0.93 0.82 -0.55 -0.36 -0.51 -0.37
-0.05 0.04 0.14 0.27 0.33 0.16 0.5 0.66 0.54 0.56 0.53 0.3 -0.55 -1.04 -1.13 -0.56 -0.3 -0.93 -0.43 -3.39 -1.96 -2.77 -0.38 -0.47 -0.53 1.32 0.99 0.94 -0.32 -0.32 -0.31 -0.23
0.42 0.09 0.52 0.44 0.68 0.13 -0.01 -0.04 0.71 0.05 0.58 0.22 -0.93 -0.6 -0.52 -0.48 -1.47 -1.78 -0.11 - -0.96 -1.81 -1.17 -1.53 -0.29 1.94 1.31 1.23 -1.29 -1.33 -1.22 -1.52
-0.29 -0.63 0.63 0.84 1.14 0.42 0.75 1.29 0.89 0.94 0.76 0.24 - - - -3.65 -3.54 -6.63 -0.56 - - - -1.71 -1.98 -0.17 2.48 0.76 1.48 -2.61 -1.63 -4.76 -5.95
0.16 0.11 1.23 1.03 1.01 1.03 0.56 1.55 1.2 0.84 0.65 0.52 -11.17 - - -3.64 -3.99 -7.92 -1.0 - - - -2.82 -2.45 -2.64 2.03 0.13 1.71 -3.6 -2.53 -4.63 -6.83
-0.08 0.22 1.09 1.06 1.17 0.96 0.84 1.35 1.09 1.05 0.92 0.69 -7.5 - - -3.93 -5.18 - -1.82 - - - -5.44 -2.64 -2.67 1.76 0.89 1.66 -3.66 -2.46 -4.73 -5.93
0.26 0.13 0.06 0.26 0.27 0.04 0.04 0.18 0.43 0.41 0.49 0.36 -0.65 -0.35 -0.11 -0.44 -0.36 -1.62 -0.04 -2.88 -1.49 -2.86 -0.45 -0.57 -0.4 1.35 1.03 0.97 -0.4 -0.47 -0.6 0.12
0.08 -0.15 -0.18 0.12 0.13 0.06 0.24 0.55 0.5 0.52 0.48 0.34 -0.08 -0.16 -0.73 0.01 -0.68 -1.54 0.13 -3.75 -3.47 -4.22 -0.27 -0.19 -0.93 1.47 0.98 0.97 -0.31 -0.31 -0.48 -0.38
0.17 0.19 0.23 0.24 0.29 0.16 0.29 0.4 0.39 0.38 0.29 0.2 -0.63 -1.01 -1.6 -0.56 -0.4 -1.13 -0.14 -3.67 -1.42 -2.48 -0.38 -0.38 -0.58 1.45 1.11 1.26 -0.32 -0.35 -0.44 -0.28

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.