Heatmap: Cluster_367 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
-0.55 -1.29 -1.56 -0.79 -0.09 0.22 1.06 0.9 0.62 0.78 -0.09 -0.27 -0.85 -0.65 0.84 -0.09 -0.41 -0.42 0.15 -5.41 -2.97 -0.43 -0.49 -0.75 -0.35 0.29 1.19 1.45 0.16 0.3 -1.08 -1.51
-0.83 -0.5 -0.65 0.04 0.19 0.69 0.97 0.42 0.5 0.34 -0.26 -0.44 -0.66 -0.73 0.39 0.14 -0.56 -1.31 0.32 -1.11 -2.46 -0.55 -0.38 -0.47 -0.25 1.02 0.81 1.19 0.08 0.3 -1.33 -1.34

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.