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Heatmap: Cluster_149 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
6.08 5.5 4.21 4.77 5.64 4.33 3.76 4.77 3.47 4.32 5.41 4.4 16.25 91.22 16.35 33.33 2.41 2.64 4.8 5.45 13.87 10.39 3.91 6.22 10.45 9.95 5.88 2.62 3.67 2.75 5.47 1.74
8.09 6.05 3.63 4.17 7.06 5.68 4.22 7.33 2.92 4.21 2.96 3.47 13.73 54.94 20.25 28.5 1.28 4.1 7.99 0.38 0.66 1.86 5.79 9.86 4.38 19.47 22.08 14.32 2.75 2.82 3.02 1.84
5.93 6.08 4.82 3.18 2.0 3.81 4.35 7.23 5.1 8.14 9.29 6.6 35.73 143.99 11.08 27.42 2.06 1.9 3.52 0.07 0.6 0.0 3.45 4.04 0.51 5.85 8.71 4.0 2.97 3.28 2.98 1.71
32.22 10.28 7.2 6.81 12.8 8.14 7.81 17.97 9.13 16.95 14.72 16.5 66.18 319.17 9.65 88.88 4.53 5.88 18.57 1.21 1.8 0.91 9.4 15.87 12.1 33.28 24.61 15.23 19.71 17.26 8.87 4.32
29.14 27.85 25.54 32.39 35.62 32.3 24.41 28.37 30.54 31.16 35.75 28.69 67.44 1181.13 241.69 172.0 13.58 13.57 22.84 46.94 61.36 14.91 16.24 21.39 17.58 17.48 20.51 18.07 16.55 19.94 15.69 18.15
4.31 1.6 3.05 2.1 2.77 1.44 1.31 1.93 2.26 1.31 2.82 3.99 8.09 28.9 5.49 7.28 2.49 5.82 2.63 0.0 0.13 0.0 2.81 8.19 2.53 1.63 2.93 3.4 3.67 4.32 5.58 4.41
16.73 13.87 24.14 20.63 18.93 19.47 15.63 26.84 20.99 25.63 26.04 23.7 169.49 496.92 113.8 179.43 16.98 28.73 26.2 0.16 0.0 0.0 32.3 35.03 9.67 59.47 27.96 41.76 22.62 23.58 8.87 13.55
114.99 102.24 103.94 113.4 74.23 59.6 95.34 108.21 90.43 120.42 117.19 126.08 231.47 1666.99 470.79 432.91 33.64 44.94 59.53 0.34 10.0 0.99 26.41 36.64 44.59 215.44 79.75 75.18 61.28 52.75 69.41 81.3
7.11 5.44 6.58 8.6 9.74 7.02 5.85 7.7 7.12 8.35 8.97 7.47 31.29 80.4 10.63 32.06 5.11 4.58 9.57 0.0 0.37 0.25 6.36 5.66 3.17 12.68 10.22 9.63 7.43 6.67 6.55 6.24
5.0 4.69 7.76 8.58 7.79 8.92 4.63 4.22 6.39 6.82 7.99 6.88 0.69 85.52 11.46 19.17 4.64 12.8 4.48 2.36 1.23 0.42 7.54 3.36 12.01 0.52 5.89 5.9 3.93 4.84 4.42 8.06
3.16 2.2 1.29 1.4 2.42 1.66 1.61 3.32 1.43 3.6 2.6 3.15 8.26 44.62 6.1 22.38 0.31 0.46 7.44 0.5 0.5 0.07 1.04 1.29 8.84 9.37 5.11 1.03 1.04 0.95 2.07 0.35
8.26 8.55 7.93 7.78 7.83 9.11 8.3 10.17 10.87 10.47 11.17 9.01 35.28 124.43 9.35 24.76 4.08 2.81 5.15 0.0 0.06 0.27 4.5 6.11 1.72 8.36 6.58 6.52 4.64 4.83 3.55 2.89
15.46 20.03 33.64 52.71 55.33 63.69 80.19 43.95 43.98 34.61 26.17 18.3 181.79 400.78 18.43 122.73 36.47 38.55 13.9 7.72 45.86 0.53 49.72 54.13 55.08 7.95 17.84 20.03 29.06 34.72 15.66 13.59
1.67 1.03 0.34 0.81 2.36 1.62 1.07 2.84 1.7 2.22 2.28 1.15 16.75 101.62 10.54 48.16 0.15 0.13 0.58 0.0 0.0 0.0 1.05 2.44 1.83 5.38 2.47 0.82 0.38 0.69 0.53 0.26
8.06 4.5 3.42 12.97 8.45 6.29 5.77 6.37 4.99 9.29 8.47 6.66 58.91 778.95 66.01 276.29 0.26 0.0 2.65 0.0 0.0 0.0 0.98 8.46 2.48 1.49 1.57 3.76 6.93 12.72 2.94 6.93
6.64 5.86 6.05 7.75 8.35 8.22 8.31 7.13 5.52 8.15 6.93 5.42 53.43 155.15 5.66 51.8 6.95 4.99 2.25 0.0 0.06 0.79 2.52 1.85 0.31 7.27 6.37 9.13 4.42 5.43 3.14 2.58
11.83 16.39 13.51 16.52 14.73 16.67 16.47 16.22 18.39 17.62 17.24 15.22 37.14 95.67 13.82 36.28 12.54 5.86 13.95 6.85 3.08 5.27 10.86 9.47 10.71 23.87 23.36 23.13 13.51 13.01 10.59 10.88
202.74 370.04 365.24 386.4 375.64 400.02 463.27 251.12 190.91 161.11 174.14 128.38 991.93 3998.54 602.2 860.31 538.79 594.21 1014.43 35.9 279.1 12.64 1052.09 864.08 260.25 270.41 440.36 402.41 459.71 520.22 235.41 211.15
8.9 4.49 6.66 7.36 3.92 10.55 4.81 7.09 5.77 4.31 5.67 4.56 59.24 191.11 38.14 87.53 32.82 37.64 17.93 0.69 4.89 1.88 32.73 21.95 11.13 10.28 1.12 2.85 30.49 23.65 13.43 4.7
5.49 9.5 2.01 2.05 3.66 1.15 1.02 5.55 2.42 3.17 1.25 3.19 25.57 131.86 38.71 14.6 0.05 2.6 1.49 0.0 0.07 0.0 2.26 2.85 33.13 1.76 2.91 0.0 1.36 1.56 1.49 0.48
13.81 5.93 5.4 5.21 4.64 6.19 4.91 16.76 7.65 9.28 9.1 9.36 27.03 121.29 1.74 45.39 1.85 6.22 4.63 1.27 0.53 0.0 4.03 7.27 4.03 17.85 21.0 8.31 8.26 4.77 6.8 3.66
142.55 152.48 145.84 212.99 158.42 168.52 175.82 195.95 195.75 203.28 204.23 138.39 688.77 2337.53 285.75 1562.92 53.77 61.49 36.41 0.73 0.31 2.45 38.19 60.29 2.17 119.19 69.85 77.73 83.7 106.04 56.56 38.24
7.05 8.59 2.36 4.24 5.57 5.19 6.27 7.01 4.46 6.45 7.37 4.33 59.5 223.19 28.43 32.63 0.32 0.11 2.43 0.0 0.0 0.0 0.6 2.38 7.2 3.88 3.12 3.28 1.33 1.89 0.7 0.89
2.63 1.71 1.17 2.74 2.07 2.28 1.71 3.98 2.12 2.72 3.35 2.01 55.97 150.75 21.32 43.04 0.18 0.36 2.16 0.0 0.0 0.0 0.16 1.13 4.6 5.98 1.04 0.23 0.66 1.88 0.32 0.55
6.95 5.33 5.17 4.91 6.86 7.28 4.19 7.11 8.77 10.6 8.74 7.58 33.65 85.7 5.39 37.84 5.45 3.24 7.5 22.18 1.95 3.93 4.8 8.06 11.35 12.8 8.92 9.45 7.03 8.35 3.75 4.47
1.84 2.6 1.04 1.68 2.12 4.39 2.4 2.38 0.98 1.35 1.39 2.23 28.48 94.95 3.82 45.99 4.09 6.63 21.67 0.0 0.0 0.0 6.01 6.36 1.02 11.87 3.97 3.13 12.59 6.66 5.65 3.43
2.5 1.29 1.1 1.86 1.91 1.52 3.54 3.29 2.9 4.46 4.17 3.55 12.39 32.74 11.77 4.5 0.0 0.0 0.03 0.0 0.0 0.0 0.0 0.36 9.23 2.05 0.43 0.81 0.02 0.13 0.02 0.12
5.69 3.18 2.47 2.44 1.84 3.18 2.95 4.55 4.78 8.37 8.97 7.09 32.9 134.93 9.06 23.37 0.95 0.61 1.92 0.0 0.22 0.0 1.4 2.22 0.93 6.44 6.63 2.68 1.65 1.87 1.5 1.47
4.11 4.24 2.53 1.38 1.52 2.04 1.91 2.07 1.5 1.81 2.48 1.83 5.08 60.62 14.47 5.7 1.05 0.51 2.89 0.0 1.14 0.0 2.67 2.49 6.59 1.99 2.61 1.3 2.27 1.68 3.13 1.98
0.02 0.39 0.02 0.04 0.03 0.2 0.21 0.03 0.31 0.02 0.05 0.02 0.04 5.25 0.03 0.35 0.11 0.06 0.04 0.0 0.0 0.0 0.0 0.02 0.0 0.11 0.0 0.0 0.06 0.06 0.02 0.0
0.7 0.82 0.58 0.53 1.25 0.28 0.46 0.42 0.71 0.7 0.84 0.73 5.12 13.18 0.6 7.0 0.1 0.6 6.87 0.21 0.0 0.0 0.35 0.76 0.62 2.9 3.51 0.7 0.61 0.88 0.34 0.32
7.95 8.72 9.97 11.99 15.22 10.46 11.1 8.56 5.74 8.35 5.69 6.4 85.17 209.49 16.74 51.09 7.97 0.47 6.09 5.75 12.19 0.29 8.2 9.31 18.45 1.76 3.2 6.09 6.92 7.41 3.58 9.27
4.78 4.62 5.89 5.66 7.55 5.29 4.71 5.22 1.96 4.47 3.67 4.5 85.48 211.56 31.94 22.68 1.54 3.67 2.03 0.0 0.0 0.0 0.34 5.53 6.67 1.72 16.17 10.16 1.92 5.66 2.82 7.31
0.43 0.41 0.05 0.15 0.46 0.48 0.15 0.25 0.73 0.49 0.26 0.31 2.77 10.71 2.82 1.82 0.55 0.7 0.31 0.0 0.0 0.0 0.38 1.14 0.74 0.26 0.41 0.48 0.43 0.85 0.52 0.62
12.88 13.63 12.02 14.6 16.18 14.08 13.12 13.68 16.36 15.13 15.73 14.53 23.67 77.44 31.25 36.97 13.79 13.58 22.68 8.35 4.25 6.69 14.48 18.05 14.78 30.68 25.92 26.86 15.56 20.75 16.77 17.5
0.14 0.05 0.13 0.0 0.07 0.04 0.1 0.3 0.03 0.07 0.62 0.14 1.3 5.54 0.17 2.15 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.1 0.18 0.41 0.31 0.0 0.05 0.06 0.45 0.04
0.14 0.22 0.16 0.16 0.17 0.18 0.21 0.29 0.39 0.34 0.32 0.14 0.4 5.46 1.77 1.19 0.08 0.18 0.22 0.41 0.29 1.11 0.13 0.1 0.51 0.36 0.3 0.12 0.24 0.22 0.13 0.07
0.0 0.0 0.0 0.0 0.04 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.59 0.08 0.0 0.0 0.09 0.0 0.0 0.0 0.0 0.0 0.04 0.0 0.17 0.0 0.0 0.0 0.04 0.0 0.0
0.67 0.64 0.12 0.39 0.34 0.52 0.22 1.62 0.97 1.55 1.48 0.84 2.88 33.99 5.78 13.86 0.05 0.0 0.15 0.0 0.21 0.0 0.1 0.28 0.8 1.44 0.62 0.34 0.27 0.36 1.01 0.06
2.77 2.55 5.83 2.26 7.38 1.48 1.56 1.63 3.69 1.87 2.28 1.97 1.28 553.69 74.18 0.47 1.81 0.0 0.8 1.11 0.51 1.18 1.44 1.93 40.86 12.35 10.27 6.14 2.23 1.56 0.58 1.49
0.53 0.6 0.22 0.16 0.23 0.15 0.28 0.28 0.03 0.14 0.21 0.2 3.57 22.15 0.15 3.55 0.15 0.08 0.07 0.0 0.0 0.0 0.04 0.13 0.15 0.29 0.66 0.33 0.44 0.18 0.38 0.0
1.07 0.85 0.56 0.37 0.58 0.5 0.12 1.41 0.9 1.5 1.56 0.79 30.8 88.89 4.35 17.76 0.08 0.37 1.05 0.04 0.0 0.0 0.07 0.62 1.87 5.88 0.26 0.12 0.22 1.03 0.09 0.27
0.01 0.02 0.0 0.0 0.0 0.0 0.1 0.0 0.0 0.02 0.0 0.0 0.06 1.69 0.02 0.53 0.0 0.03 0.08 0.0 0.0 0.0 0.0 0.06 0.0 0.06 0.0 0.13 0.0 0.03 0.08 0.0
6.82 5.95 3.04 4.19 4.75 5.72 2.39 6.05 3.62 7.9 6.16 4.03 92.64 266.85 18.3 64.53 0.72 0.62 8.27 0.0 0.13 0.0 1.16 4.4 37.21 8.27 10.42 3.93 1.78 2.48 1.52 1.74
10.72 17.31 18.82 24.99 17.37 16.53 35.04 27.51 24.56 34.68 23.21 22.83 85.17 308.28 93.13 105.18 8.38 21.01 19.1 1.45 66.06 1.54 22.34 31.32 47.88 61.69 16.35 8.41 14.07 13.57 36.19 62.31
14.33 12.29 13.71 11.76 12.2 14.64 11.72 17.8 13.13 14.47 13.09 11.69 94.3 315.01 37.42 67.8 7.2 5.55 7.37 6.48 8.68 8.79 7.61 9.77 25.04 18.43 21.07 16.88 7.17 5.95 5.55 5.0
38.58 28.25 20.0 27.05 31.33 24.75 22.01 52.07 40.64 51.18 39.34 46.87 88.92 283.12 68.39 109.34 5.6 5.0 34.53 1.7 1.32 1.58 17.68 31.51 25.87 110.36 73.85 42.49 26.87 20.48 37.57 35.37
67.02 37.2 24.26 22.79 33.23 36.75 22.58 60.71 38.14 68.42 81.98 40.89 787.34 1466.29 37.36 326.92 11.73 17.73 76.7 16.48 24.79 2.78 59.83 242.01 176.73 152.13 83.44 16.41 30.14 39.98 40.08 57.6
2.33 5.15 9.1 11.36 13.01 11.23 4.0 2.02 1.42 2.17 1.67 0.75 9.86 50.47 4.62 3.59 11.55 10.28 5.71 0.26 15.61 0.39 7.39 6.5 14.45 2.92 7.67 11.25 2.29 1.73 1.25 2.62
2.16 3.13 2.59 5.74 6.43 4.41 3.76 2.36 2.88 2.26 1.89 1.45 14.83 54.91 9.85 29.84 0.59 1.12 0.61 0.0 0.59 0.0 6.75 10.79 8.71 0.41 4.58 11.11 1.0 1.94 1.25 1.92
0.4 0.07 0.0 0.0 0.0 0.0 0.09 0.1 0.0 0.0 0.0 0.53 4.59 46.95 0.58 2.36 0.09 0.57 0.92 0.0 0.0 0.0 0.0 0.25 0.0 1.12 0.53 0.0 0.0 0.38 0.09 0.05
5.12 3.71 3.24 6.41 9.49 8.08 5.75 5.15 2.61 1.37 4.27 2.43 6.73 100.2 27.52 21.18 0.2 0.36 3.42 0.0 10.3 0.0 2.71 4.54 3.6 4.69 4.99 0.0 0.86 3.2 0.0 1.78
4.31 2.48 0.39 0.82 1.57 1.88 1.13 3.32 1.64 2.62 3.58 2.0 35.11 95.76 2.53 24.27 0.97 4.0 12.11 0.05 16.47 0.24 1.85 5.36 9.69 12.87 3.2 1.31 6.27 3.81 5.97 5.22
1.81 1.21 0.58 0.22 0.52 0.99 0.72 1.78 1.5 0.91 1.24 0.63 12.39 47.6 0.54 14.73 0.41 0.97 0.64 0.0 0.0 0.0 0.51 0.52 5.57 4.42 3.14 0.12 1.19 0.33 2.95 0.27
9.48 9.21 9.44 13.16 11.66 11.25 9.52 9.48 8.49 9.52 9.15 7.68 37.02 188.39 39.07 40.6 5.73 5.79 9.58 0.0 1.12 0.04 3.2 3.42 1.36 9.2 10.5 11.02 9.02 8.02 6.24 5.0
5.06 2.86 2.69 1.44 3.77 2.31 2.92 6.89 1.22 6.26 2.8 2.58 26.02 89.97 4.77 29.26 0.32 2.07 1.4 0.0 0.0 0.26 1.04 2.46 2.91 2.01 1.6 1.98 2.0 1.27 1.01 0.46
3.3 5.98 0.0 2.01 1.63 2.1 1.6 6.43 4.4 2.51 1.23 3.11 78.28 384.94 4.54 112.38 0.0 0.21 0.35 0.0 0.0 0.0 2.62 4.13 3.37 2.71 2.31 0.0 1.78 1.13 0.15 0.4
21.56 11.97 6.88 8.05 14.46 17.33 7.61 19.49 12.7 17.33 12.98 15.43 54.0 203.17 2.61 138.27 2.44 0.97 22.12 7.2 10.12 0.0 15.13 51.53 28.68 47.36 44.92 22.05 25.67 17.85 21.16 7.43
2.49 0.0 1.91 0.3 2.75 0.18 0.27 5.21 1.28 4.35 2.66 1.35 86.22 187.95 2.37 93.99 0.31 2.05 1.3 0.0 0.0 0.0 0.66 2.65 0.0 3.88 0.72 1.58 0.95 1.09 0.27 0.25
15.53 9.41 4.92 4.85 3.94 9.28 5.73 19.37 9.8 11.24 8.58 7.38 81.88 273.71 7.41 113.48 1.53 5.72 7.51 0.0 0.29 4.11 7.08 11.11 10.35 21.41 12.98 4.58 8.65 5.39 6.74 3.59
8.97 6.63 7.73 8.38 6.6 8.96 7.06 9.26 10.96 11.98 10.78 8.67 55.58 422.14 15.19 38.78 4.41 3.77 1.56 2.68 5.6 0.15 3.13 2.34 4.74 15.64 7.98 9.84 5.69 6.57 3.71 3.95
24.51 24.13 22.23 22.69 52.66 21.89 24.78 49.8 19.04 20.68 24.91 20.32 245.4 762.41 1.23 12.46 69.44 62.98 32.83 0.0 0.0 0.0 2.18 4.41 3.86 7.97 126.39 32.21 36.1 47.13 19.18 61.36
1.03 0.74 0.51 0.29 0.73 1.03 0.7 1.89 1.33 1.49 1.48 1.21 21.8 44.8 2.23 12.32 0.0 0.24 2.28 0.0 0.0 0.0 0.13 0.44 1.99 3.15 1.68 0.0 0.32 0.33 0.87 0.27
0.58 0.34 0.01 0.15 0.04 0.31 0.07 1.01 0.05 0.08 0.45 0.22 5.73 17.42 1.55 5.08 0.09 0.11 3.35 0.0 0.08 0.0 0.12 0.19 0.28 3.33 2.36 0.16 0.48 0.15 0.82 0.18
8.98 5.97 5.77 8.94 9.63 7.48 7.51 9.13 9.87 13.3 9.79 8.97 64.54 148.21 37.17 68.6 1.32 2.95 0.98 6.96 2.25 45.09 6.59 12.73 1.17 3.4 3.37 6.43 1.8 3.97 2.96 4.32

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)