- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Aerial tissue - Light - ZT1 | Aerial tissue - Light - ZT3 | Aerial tissue - Light - ZT5 | Aerial tissue - Light - ZT7 | Aerial tissue - Light - ZT9 | Aerial tissue - Light - ZT11 | Aerial tissue - Dark - ZT1 | Aerial tissue - Dark - ZT3 | Aerial tissue - Dark - ZT5 | Aerial tissue - Dark - ZT7 | Aerial tissue - Dark - ZT9 | Aerial tissue - Dark - ZT11 | Roots | Root elongation and differentiation zone | Root meristematic zone | Aerial roots and rhizophores | Shoot tips | Microphyll | Strobili | Shoot apical meristem - AC | Shoot apical meristem - Core | Shoot apical meristem - P1 | Stem - Top | Stem - Bottom | Whole plant | Aerial tissue - Stress - Dark | Aerial tissue - Stress - High light | Aerial tissue - Stress - Cont | Aerial tissue - Stress - 37C 1h | Aerial tissue - Stress - 37C 3h | Aerial tissue - Stress - 4C 1h | Aerial tissue - Stress - 4C 3h |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| -1.03 | -0.29 | -0.97 | -2.07 | -1.49 | -0.34 | -1.81 | 0.53 | -0.65 | -0.25 | -0.11 | -0.03 | -0.06 | -0.58 | -0.54 | 0.24 | -0.65 | 0.55 | 0.26 | -2.11 | - | - | -1.36 | -1.37 | 1.26 | 2.06 | 0.19 | - | 0.42 | -0.83 | 1.33 | 1.91 | |
| -0.84 | -2.07 | -2.87 | -0.66 | -1.07 | 0.01 | 0.49 | 1.51 | 0.23 | -0.81 | 0.9 | 0.03 | -0.74 | 0.62 | -2.05 | -0.65 | -1.84 | -0.08 | 0.71 | - | - | - | -0.1 | -0.67 | 1.12 | 2.05 | 0.14 | - | -0.51 | -0.64 | 0.91 | 0.98 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.