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Heatmap: Cluster_106 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00001p00060680 (evm_27.TU.AmTr_v1.0_scaffold00001.38)
 8.73 0.0 0.44 0.0 0.1 0.0 0.06 0.0 0.3 0.2 2.9 6.78 0.07 0.07 0.03 0.37 1.98 0.8 0.49 0.05 1.58 0.3
AMTR_s00001p00124880 (evm_27.TU.AmTr_v1.0_scaffold00001.96)
 8.58 0.0 0.0 0.0 0.86 0.0 0.06 0.0 0.09 0.07 3.79 0.97 1.03 0.27 0.28 0.19 8.02 1.22 0.42 0.39 0.33 1.12
AMTR_s00001p00149980 (evm_27.TU.AmTr_v1.0_scaffold00001.132)
 0.0 0.0 0.0 0.0 1.72 0.0 0.0 0.0 0.0 0.0 1.05 0.0 0.42 0.0 0.03 0.0 1.44 4.16 0.0 0.0 0.0 2.73
5.0 0.11 3.64 0.01 0.47 0.0 0.06 0.0 0.03 0.04 1.28 2.31 1.07 0.2 0.57 1.56 1.78 1.62 1.68 2.12 0.91 0.94
AMTR_s00001p00165980 (evm_27.TU.AmTr_v1.0_scaffold00001.156)
 5.33 0.0 0.0 0.0 0.15 0.0 0.02 0.0 0.01 0.01 0.22 5.14 0.01 0.0 0.05 0.0 0.0 0.0 0.0 0.01 0.0 0.03
AMTR_s00001p00253190 (evm_27.TU.AmTr_v1.0_scaffold00001.327)
 8.57 0.0 0.0 0.0 2.16 0.0 0.17 0.23 0.37 0.41 2.61 5.61 1.65 0.6 1.33 1.69 2.53 1.13 1.71 0.87 0.65 0.88
AMTR_s00004p00149230 (evm_27.TU.AmTr_v1.0_scaffold00004.152)
 12.56 0.0 0.34 0.65 2.07 0.0 0.34 0.01 0.67 0.48 5.4 2.62 1.96 1.42 3.18 2.63 6.58 5.38 5.0 3.88 7.0 2.1
AMTR_s00006p00265460 (evm_27.TU.AmTr_v1.0_scaffold00006.276)
 7.26 0.0 0.74 0.01 2.21 0.0 6.02 0.0 2.26 2.24 6.16 6.47 4.05 2.43 1.97 5.21 9.44 6.25 5.21 5.48 6.06 4.16
AMTR_s00007p00082080 (evm_27.TU.AmTr_v1.0_scaffold00007.47)
 8.42 0.0 0.0 0.05 0.58 0.0 0.43 0.0 1.21 0.79 3.24 3.51 1.02 0.64 0.87 2.03 5.07 4.13 3.03 1.28 3.82 0.93
AMTR_s00008p00179920 (evm_27.TU.AmTr_v1.0_scaffold00008.99)
 0.0 0.0 0.0 0.04 0.05 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.03 0.0 0.0 0.0 0.47 1.33 0.0 0.0 0.0 0.03
AMTR_s00010p00185340 (evm_27.TU.AmTr_v1.0_scaffold00010.159)
 8.45 0.0 0.0 0.0 0.44 0.0 0.0 0.0 0.01 0.0 0.86 1.14 0.84 0.68 0.5 0.66 1.34 0.71 1.24 0.42 0.64 0.36
AMTR_s00010p00259780 (evm_27.TU.AmTr_v1.0_scaffold00010.428)
 7.38 0.0 0.0 0.0 0.31 0.0 0.17 0.0 0.39 0.25 3.1 1.89 0.9 0.33 0.21 1.28 6.0 1.66 1.46 0.89 1.72 0.68
AMTR_s00010p00260120 (evm_27.TU.AmTr_v1.0_scaffold00010.433)
 10.62 0.0 0.0 0.07 0.44 0.0 0.0 0.0 0.0 0.0 0.94 1.17 0.4 0.1 0.29 1.2 1.29 1.07 1.17 0.74 1.35 0.3
AMTR_s00012p00251890 (evm_27.TU.AmTr_v1.0_scaffold00012.257)
 7.99 0.0 6.52 0.01 0.34 0.24 0.03 0.0 1.78 0.49 2.13 2.5 1.18 0.43 1.55 2.53 4.46 2.78 2.88 2.02 0.36 1.29
AMTR_s00015p00234510 (evm_27.TU.AmTr_v1.0_scaffold00015.87)
 18.59 0.0 30.4 0.02 12.63 0.16 3.94 0.0 4.39 4.37 17.09 18.32 6.84 2.56 2.35 8.85 14.71 14.0 13.57 7.53 10.74 7.88
AMTR_s00017p00063610 (evm_27.TU.AmTr_v1.0_scaffold00017.22)
 3.06 0.0 0.0 0.0 0.54 0.0 0.0 0.0 0.0 0.18 0.0 0.0 0.06 0.08 0.14 0.0 0.0 0.0 0.0 0.0 0.0 0.33
AMTR_s00019p00256940 (evm_27.TU.AmTr_v1.0_scaffold00019.458)
 11.48 3.86 0.55 0.0 1.61 0.0 0.37 0.0 0.6 3.32 6.01 10.88 1.65 0.14 0.43 0.36 12.59 2.0 1.11 0.42 0.41 1.48
AMTR_s00021p00056070 (evm_27.TU.AmTr_v1.0_scaffold00021.26)
 58.14 21.47 14.65 0.85 16.88 0.29 24.96 4.63 22.56 22.13 38.49 29.3 18.38 13.57 9.59 35.31 68.38 92.02 51.22 28.68 36.12 10.62
AMTR_s00021p00119940 (evm_27.TU.AmTr_v1.0_scaffold00021.67)
 8.11 0.0 0.0 0.0 1.27 0.0 0.06 0.0 0.04 0.0 4.15 2.14 4.4 0.62 0.94 4.83 4.6 3.13 3.3 3.52 1.12 2.07
AMTR_s00025p00155620 (evm_27.TU.AmTr_v1.0_scaffold00025.175)
 7.45 0.0 0.0 0.0 0.44 0.0 0.0 0.01 0.0 0.0 3.55 4.0 0.97 0.21 0.39 3.19 5.32 6.87 4.09 1.24 5.61 1.37
AMTR_s00027p00243620 (evm_27.TU.AmTr_v1.0_scaffold00027.147)
 8.24 0.22 0.0 0.0 1.09 0.0 0.0 1.04 0.03 0.11 0.2 1.02 0.49 0.18 0.17 0.69 0.48 0.89 0.26 0.43 1.06 0.23
AMTR_s00032p00136310 (evm_27.TU.AmTr_v1.0_scaffold00032.98)
 16.43 0.0 1.51 0.02 1.39 0.0 0.37 0.0 1.15 0.76 4.0 3.94 4.06 2.13 2.66 4.82 7.66 5.05 4.71 3.79 5.87 2.71
AMTR_s00032p00145740 (evm_27.TU.AmTr_v1.0_scaffold00032.109)
 9.14 0.0 0.23 0.03 1.12 0.0 0.08 0.0 0.13 0.03 4.25 0.88 0.91 0.3 0.98 3.27 2.88 3.85 1.99 1.07 4.49 0.98
AMTR_s00032p00193650 (evm_27.TU.AmTr_v1.0_scaffold00032.175)
 31.77 0.11 42.34 8.35 2.49 0.23 0.26 0.0 0.24 0.23 28.19 37.52 24.49 13.18 8.26 19.46 28.29 30.15 26.59 12.6 16.15 17.26
AMTR_s00033p00188620 (evm_27.TU.AmTr_v1.0_scaffold00033.143)
 30.08 9.05 0.0 0.47 10.36 7.11 4.65 0.01 3.76 3.82 20.28 16.35 17.9 9.13 7.82 12.54 39.89 22.87 18.78 21.04 38.67 6.08
AMTR_s00033p00189650 (evm_27.TU.AmTr_v1.0_scaffold00033.144)
 10.99 0.41 0.0 0.0 4.07 0.0 0.06 0.0 0.2 0.22 3.17 4.49 1.21 0.36 2.4 0.22 7.63 1.26 2.23 1.75 0.38 1.04
AMTR_s00037p00074630 (evm_27.TU.AmTr_v1.0_scaffold00037.23)
 5.53 0.0 0.0 0.0 1.26 0.0 0.04 0.0 0.0 0.05 0.63 0.0 0.17 0.07 0.24 0.22 0.4 0.0 0.0 0.09 1.77 0.02
AMTR_s00037p00132400 (evm_27.TU.AmTr_v1.0_scaffold00037.55)
 25.49 0.0 0.0 0.0 1.14 0.0 0.28 0.0 0.73 0.5 3.31 3.72 2.25 1.64 1.25 2.51 4.74 0.41 1.5 2.74 1.82 1.54
AMTR_s00042p00022530 (evm_27.TU.AmTr_v1.0_scaffold00042.3)
 5.83 0.25 1.4 0.05 0.95 0.46 1.32 0.0 1.61 1.12 3.2 4.45 0.9 0.4 0.99 0.58 6.28 0.89 0.78 1.29 1.14 1.62
0.7 0.0 0.0 0.03 0.07 0.0 0.0 0.0 0.0 0.0 0.09 0.0 0.0 0.0 0.01 0.0 0.0 0.0 0.0 0.0 0.0 0.03
AMTR_s00044p00151840 (evm_27.TU.AmTr_v1.0_scaffold00044.157)
 7.61 0.0 0.0 0.17 1.13 0.0 0.0 0.01 0.02 0.01 3.46 4.02 0.98 0.77 0.94 2.84 5.56 3.27 3.88 3.43 4.99 1.42
AMTR_s00045p00216860 (evm_27.TU.AmTr_v1.0_scaffold00045.304)
 13.48 0.0 0.0 0.0 0.5 0.0 0.05 0.0 0.72 0.44 2.11 0.75 1.26 1.47 0.97 0.51 3.09 2.64 1.55 2.43 8.29 0.91
AMTR_s00049p00210240 (evm_27.TU.AmTr_v1.0_scaffold00049.233)
 13.45 0.0 0.0 0.02 0.9 0.0 0.0 0.0 0.01 0.0 2.18 1.49 0.74 0.21 1.12 1.85 2.0 1.31 1.68 1.12 2.73 0.53
AMTR_s00050p00204320 (evm_27.TU.AmTr_v1.0_scaffold00050.63)
 3.43 0.0 0.0 0.0 0.1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.27 0.2 0.29 0.0 0.56 0.0 0.48 0.06 0.96 0.22
AMTR_s00052p00103370 (evm_27.TU.AmTr_v1.0_scaffold00052.30)
 20.5 0.0 0.0 0.97 1.76 0.0 0.13 0.02 0.52 0.36 5.14 3.41 4.14 3.68 3.47 1.85 5.33 4.9 4.11 2.99 6.86 2.32
AMTR_s00053p00019520 (evm_27.TU.AmTr_v1.0_scaffold00053.6)
 0.0 0.0 0.0 0.0 0.22 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.06 0.0 0.0 0.0 0.66 0.79 0.0 0.05 0.0 0.0
AMTR_s00054p00091550 (evm_27.TU.AmTr_v1.0_scaffold00054.30)
 2.63 0.0 0.0 0.0 0.03 0.0 0.0 0.0 0.0 0.09 0.6 0.0 0.27 0.08 0.15 0.0 0.35 0.0 0.27 0.16 1.63 0.25
AMTR_s00059p00187950 (evm_27.TU.AmTr_v1.0_scaffold00059.206)
 13.02 0.0 0.0 0.0 0.04 0.0 0.03 0.0 0.0 0.08 0.6 0.0 0.19 0.03 0.53 0.0 2.99 0.0 0.0 1.64 0.0 0.15
AMTR_s00061p00191420 (evm_27.TU.AmTr_v1.0_scaffold00061.220)
 17.41 0.0 0.0 0.1 0.99 0.0 0.59 0.04 0.54 0.82 5.86 4.3 3.18 1.81 1.91 3.72 6.48 4.5 3.82 2.3 3.38 2.22
AMTR_s00062p00133590 (evm_27.TU.AmTr_v1.0_scaffold00062.116)
 58.91 15.84 5.05 1.04 6.3 0.0 0.01 0.0 0.06 0.06 12.18 12.46 12.44 6.42 10.59 17.44 23.7 17.56 13.76 11.13 13.99 8.01
AMTR_s00062p00188560 (evm_27.TU.AmTr_v1.0_scaffold00062.190)
 13.87 0.0 0.0 0.0 1.01 0.0 0.0 0.0 0.2 0.06 0.86 0.98 0.42 0.1 0.33 0.99 1.14 3.0 1.91 1.17 3.47 0.39
AMTR_s00065p00008520 (evm_27.TU.AmTr_v1.0_scaffold00065.1)
 2.4 0.0 1.61 0.03 0.51 0.0 0.02 0.0 0.0 0.0 1.56 1.71 0.9 0.23 0.44 3.38 2.89 2.28 1.33 1.05 2.92 0.66
AMTR_s00069p00036080 (evm_27.TU.AmTr_v1.0_scaffold00069.18)
 37.9 4.01 12.58 0.57 3.04 0.0 6.98 0.07 9.13 8.38 7.86 9.17 6.87 3.74 8.34 20.8 18.56 13.94 12.78 17.63 13.14 10.86
AMTR_s00072p00154380 (evm_27.TU.AmTr_v1.0_scaffold00072.90)
 6.89 0.0 0.0 0.0 0.79 0.0 0.04 0.0 0.12 0.05 0.44 0.0 0.4 0.21 0.63 0.26 1.1 0.33 0.15 0.34 3.61 0.33
AMTR_s00074p00173120 (evm_27.TU.AmTr_v1.0_scaffold00074.90)
 7.17 0.0 0.0 0.0 1.53 0.0 0.16 0.0 0.43 0.14 1.01 0.4 0.34 0.22 0.19 0.54 2.53 0.0 0.0 0.26 0.0 0.33
7.86 0.0 0.0 0.03 0.29 0.0 0.0 0.0 0.01 0.02 1.34 0.79 0.89 0.07 0.32 1.72 2.87 1.15 1.52 1.24 1.79 0.58
AMTR_s00081p00019740 (evm_27.TU.AmTr_v1.0_scaffold00081.3)
 7.61 0.0 0.27 0.05 0.34 0.0 0.02 0.0 0.06 0.05 1.93 1.32 0.84 0.6 1.01 0.95 5.14 0.93 1.17 0.69 2.21 1.25
AMTR_s00081p00056740 (evm_27.TU.AmTr_v1.0_scaffold00081.18)
 7.39 0.0 0.0 0.93 0.5 0.0 0.01 0.0 0.02 0.01 4.62 4.11 1.44 0.39 1.06 4.17 6.37 3.28 3.17 3.56 6.08 1.79
AMTR_s00088p00045930 (evm_27.TU.AmTr_v1.0_scaffold00088.23)
 8.08 0.0 0.0 0.07 0.83 0.0 0.01 0.0 0.02 0.02 1.87 1.78 0.47 0.35 0.43 2.15 2.02 2.01 1.91 1.45 2.7 0.53
AMTR_s00089p00102850 (evm_27.TU.AmTr_v1.0_scaffold00089.57)
 0.0 0.0 0.0 0.0 1.03 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.56 0.0 0.43 0.0 1.6 5.54 0.0 0.44 0.0 0.15
AMTR_s00090p00180780 (evm_27.TU.AmTr_v1.0_scaffold00090.111)
 22.43 0.0 0.0 0.69 2.82 0.0 0.86 0.0 1.01 0.91 16.96 15.37 2.3 4.05 2.5 16.56 23.98 25.67 16.43 13.67 27.29 3.49
AMTR_s00091p00076380 (evm_27.TU.AmTr_v1.0_scaffold00091.23)
 4.3 0.06 0.0 0.0 0.31 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.05 0.02 0.31 0.0 0.24 0.0 0.0 0.06 2.27 0.17
AMTR_s00095p00039180 (evm_27.TU.AmTr_v1.0_scaffold00095.17)
 10.13 0.0 0.0 0.0 0.36 0.0 0.01 0.01 0.01 0.01 1.49 1.37 0.47 0.12 0.32 1.07 1.72 1.67 0.92 0.96 1.29 0.52
AMTR_s00099p00149290 (evm_27.TU.AmTr_v1.0_scaffold00099.135)
 116.69 30.6 8.92 0.02 6.85 0.35 0.04 0.0 0.23 0.17 21.39 11.95 6.22 1.15 8.39 28.39 17.91 25.4 13.62 33.24 29.23 2.01
AMTR_s00101p00094210 (evm_27.TU.AmTr_v1.0_scaffold00101.71)
 5.87 0.0 0.0 0.21 0.87 0.0 0.27 0.0 0.43 0.31 1.99 3.9 1.26 0.58 1.41 2.31 4.13 1.99 2.63 2.97 4.08 1.85
AMTR_s00103p00113040 (evm_27.TU.AmTr_v1.0_scaffold00103.66)
 12.93 0.0 5.75 0.01 1.01 0.0 0.0 0.0 0.01 0.01 2.2 2.4 1.33 0.5 1.61 1.8 3.14 1.88 1.74 1.53 3.87 1.8
AMTR_s00106p00138610 (evm_27.TU.AmTr_v1.0_scaffold00106.109)
 45.71 9.08 24.98 2.86 5.15 4.07 17.29 0.32 14.69 17.42 37.18 28.79 17.61 14.67 11.96 20.29 36.5 35.52 34.46 24.95 26.49 14.43
AMTR_s00109p00084970 (evm_27.TU.AmTr_v1.0_scaffold00109.68)
 9.28 0.0 0.0 0.17 0.15 0.0 0.0 0.49 0.01 0.03 0.71 1.17 0.37 0.08 0.13 0.54 1.1 1.31 1.33 0.42 1.42 0.3
AMTR_s00116p00101320 (evm_27.TU.AmTr_v1.0_scaffold00116.22)
 22.89 2.19 11.21 2.63 9.97 0.0 2.38 2.33 5.49 3.88 15.04 14.95 7.82 5.13 6.31 6.28 18.75 9.03 7.77 4.65 5.67 7.18
AMTR_s00117p00084500 (evm_27.TU.AmTr_v1.0_scaffold00117.27)
 20.5 0.0 1.2 0.0 1.43 0.0 1.5 0.0 1.29 1.68 13.71 10.96 4.95 2.34 1.5 4.43 15.68 8.76 6.43 4.23 2.15 5.54
AMTR_s00118p00046340 (evm_27.TU.AmTr_v1.0_scaffold00118.3)
 13.92 0.0 0.0 0.0 0.12 0.0 0.0 0.0 0.22 0.03 0.31 0.53 0.26 0.02 0.03 0.54 1.11 0.69 0.75 1.04 0.42 0.34
AMTR_s00119p00029960 (evm_27.TU.AmTr_v1.0_scaffold00119.13)
 9.43 0.0 0.0 0.01 0.6 0.0 0.49 0.0 1.04 0.55 4.11 3.75 1.07 1.76 1.21 1.4 2.2 6.43 4.45 0.7 5.65 0.85
AMTR_s00121p00019250 (evm_27.TU.AmTr_v1.0_scaffold00121.3)
 50.77 15.47 53.36 4.91 12.1 1.27 5.62 0.57 5.18 6.26 36.49 51.1 16.19 11.23 7.4 7.97 18.08 34.19 21.07 16.49 10.61 14.39
AMTR_s00129p00120990 (evm_27.TU.AmTr_v1.0_scaffold00129.97)
 5.98 0.0 0.0 0.15 1.13 0.0 1.18 0.0 2.11 1.04 3.77 3.84 1.82 0.64 0.92 1.95 5.02 2.1 2.0 1.8 2.26 1.69
7.85 0.0 0.0 0.33 2.15 0.0 1.36 0.0 1.39 1.01 5.12 7.82 2.67 1.26 2.93 3.17 8.68 6.04 6.15 5.03 7.01 2.38
10.8 0.0 0.0 2.08 0.81 0.0 0.0 0.0 0.02 0.0 0.0 0.0 0.05 0.0 0.06 0.0 0.17 0.0 0.0 0.1 4.07 0.0
AMTR_s00146p00086950 (evm_27.TU.AmTr_v1.0_scaffold00146.53)
 17.84 0.0 1.12 2.03 2.18 0.0 0.52 1.27 1.12 0.62 3.93 3.13 2.82 2.13 2.41 3.96 6.41 1.45 2.26 1.94 4.37 1.66
AMTR_s00153p00015810 (evm_27.TU.AmTr_v1.0_scaffold00153.3)
 11.32 0.0 0.0 0.31 3.94 0.0 1.51 0.0 4.55 2.38 4.88 8.45 2.47 1.25 2.0 1.42 10.54 3.03 2.05 0.97 1.64 2.22
0.22 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.04
AMTR_s00157p00060290 (evm_27.TU.AmTr_v1.0_scaffold00157.28)
 29.58 15.07 23.72 0.0 0.15 0.44 0.0 0.0 0.04 0.02 2.21 6.94 5.45 2.67 1.91 4.29 8.37 14.24 8.99 4.34 1.25 4.31
AMTR_s00197p00027670 (evm_27.TU.AmTr_v1.0_scaffold00197.9)
 13.62 0.0 0.0 0.0 4.56 0.0 16.76 0.0 9.71 7.21 11.05 9.69 5.73 6.53 2.03 2.5 35.21 68.36 16.87 9.95 9.55 1.95
AMTR_s00245p00017720 (evm_27.TU.AmTr_v1.0_scaffold00245.2)
 10.46 5.23 6.22 13.7 5.06 1.25 0.2 0.0 0.1 0.08 18.01 6.81 19.06 2.77 3.25 0.0 45.2 61.03 6.97 1.13 0.0 11.58
AMTR_s00420p00013050 (evm_27.TU.AmTr_v1.0_scaffold00420.1)
 23.75 0.0 0.0 0.0 0.05 0.0 0.0 0.0 0.09 0.01 1.03 0.83 0.64 0.01 0.06 0.74 1.17 0.48 2.0 2.24 2.81 0.55
AMTR_s00420p00013340 (evm_27.TU.AmTr_v1.0_scaffold00420.2)
 9.66 0.0 0.0 0.0 0.49 0.0 0.0 0.0 0.0 0.0 1.59 0.37 0.5 0.06 0.01 1.25 0.6 0.97 1.09 1.64 2.9 0.32
AMTR_s00815p00010930 (evm_27.TU.AmTr_v1.0_scaffold00815.1)
 73.3 2.18 0.17 0.0 9.13 0.0 1.87 6.34 3.74 2.97 9.09 14.18 9.77 4.72 8.02 9.24 12.38 7.2 13.99 8.36 24.27 7.83
AMTR_s01748p00005760 (evm_27.TU.AmTr_v1.0_scaffold01748.1)
 14.99 0.0 0.0 0.0 0.29 0.0 0.0 0.0 0.0 0.0 4.7 4.07 2.24 0.67 1.62 5.05 6.69 5.94 5.6 4.75 4.27 2.95

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)