Heatmap: Cluster_356 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
0.14 -3.57 -0.5 -0.17 - 1.33 1.17 1.29 0.61 1.57 0.76 -0.06 - -3.64 -3.41 - 0.85 -0.45 2.55 - - - -1.7 -3.27 - -0.05 -0.48 0.4 -0.07 0.34 -1.82 -1.47
-0.42 -0.25 -1.22 -1.09 -0.14 0.58 1.11 1.24 0.83 0.3 0.33 -0.35 -1.02 -1.44 0.19 -1.05 -0.59 -0.56 1.46 -1.9 0.84 -4.98 -0.3 -0.53 0.34 -0.26 -0.61 0.31 0.01 0.01 -0.46 -0.67

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.