Heatmap: Cluster_23 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 10.27 0.0 0.0 0.37 0.0 0.0 0.3 0.0 0.0 7.84 0.29 0.0 0.0 0.0 0.0 0.0 1.36 0.0 0.0 0.0
37.86 34.85 38.47 46.61 50.87 47.22 53.29 58.79 53.8 57.13 51.21 47.12 53.59 37.98 53.57 45.89 27.18 22.81 44.62 17.56 36.74 63.79 39.86 46.73 44.38 53.26 33.55 32.5 33.66 32.55 22.0 21.59
4.69 5.45 4.12 3.53 4.07 4.84 4.25 4.4 5.57 5.29 4.3 4.86 4.9 2.58 3.2 7.46 2.8 2.42 4.53 0.13 0.0 9.27 5.63 6.39 0.08 3.11 3.1 2.02 4.07 4.13 4.36 3.68
2.73 3.22 2.23 2.91 1.87 2.81 2.47 2.67 2.51 2.64 2.74 2.88 6.23 12.5 3.67 9.2 1.33 2.43 1.29 0.02 1.37 10.41 3.46 5.35 5.73 1.16 2.02 2.22 1.63 1.97 2.62 3.17
13.93 12.94 7.86 14.94 20.13 14.27 13.12 12.95 14.29 14.09 19.13 13.48 26.74 19.07 27.27 29.31 19.09 16.42 29.14 23.68 15.42 31.26 12.87 14.48 23.17 18.77 19.4 14.97 22.62 18.52 16.57 17.35
4.11 5.32 3.98 6.39 5.02 6.88 5.48 4.83 4.52 4.41 4.23 3.48 4.79 2.67 6.84 7.85 3.9 6.45 5.78 0.54 4.6 11.2 6.77 4.9 3.64 3.8 6.32 5.99 4.43 4.92 2.76 2.04
22.29 21.09 19.56 19.53 19.5 20.13 19.07 21.72 21.82 23.31 23.99 23.56 41.84 21.67 19.76 37.96 13.78 14.44 22.34 11.79 13.02 32.23 23.09 24.27 18.84 17.7 12.36 10.89 16.97 16.97 16.78 23.64
23.48 19.9 10.07 16.9 19.82 16.97 19.6 19.74 22.38 19.63 23.0 18.3 62.43 37.14 17.36 53.76 10.57 8.54 20.67 2.21 39.69 40.88 13.49 17.55 35.78 22.08 15.84 16.98 11.34 12.33 19.36 15.5
10.84 7.46 7.59 7.49 5.09 8.19 4.35 10.27 8.04 10.02 6.01 10.55 4.62 8.86 11.8 5.47 5.61 17.14 7.66 0.36 14.84 8.0 3.74 5.28 8.3 10.4 10.5 14.19 6.05 6.78 3.68 2.06
15.68 26.53 54.05 65.36 92.78 48.64 22.81 36.73 23.37 19.46 16.91 11.66 181.44 61.5 8.32 79.85 3.38 5.05 58.02 8.17 8.23 5.49 25.94 82.22 108.03 234.18 25.5 17.06 5.77 6.7 7.56 7.65
0.08 0.0 0.03 0.01 0.0 0.04 0.1 0.05 0.0 0.06 0.09 0.12 0.3 0.64 0.05 0.51 0.0 0.01 0.03 0.0 0.19 0.35 0.0 0.0 0.09 0.13 0.03 0.0 0.04 0.0 0.01 0.01
2.21 3.27 2.58 2.76 3.31 4.16 3.72 2.99 4.41 3.82 4.04 2.08 4.27 3.54 6.18 4.74 3.14 2.98 5.37 0.0 0.7 6.33 2.93 3.1 1.29 3.17 3.84 3.67 3.91 3.96 1.19 1.55
33.28 29.46 28.81 33.06 45.87 38.84 38.57 55.5 54.64 52.1 40.51 35.36 110.43 23.16 44.75 50.73 27.17 22.53 54.02 21.62 37.23 12.42 41.07 56.78 60.85 101.75 45.87 45.86 33.22 38.75 27.99 24.98
2.95 2.01 2.68 2.76 1.35 3.38 3.76 4.84 5.23 3.46 4.1 3.17 13.01 0.79 0.76 3.29 0.86 1.11 4.93 0.0 2.13 0.0 2.08 2.86 7.53 10.46 2.12 3.12 0.75 1.15 1.01 0.9
4.65 5.16 5.18 5.27 4.9 4.72 4.54 4.61 4.15 5.36 4.97 4.44 3.57 3.83 6.4 4.16 3.84 5.18 6.43 0.6 5.99 5.12 4.4 3.95 5.3 6.82 5.38 5.98 3.71 3.75 2.89 2.98
10.14 10.74 11.31 11.48 12.11 13.12 17.39 15.67 14.2 16.28 14.9 12.24 15.07 13.4 22.19 20.09 9.35 6.95 14.07 5.23 13.49 16.62 12.29 13.59 5.6 8.66 8.43 9.22 8.98 9.02 10.42 7.21
0.4 0.66 1.25 0.81 0.34 0.65 0.98 0.37 0.39 0.39 0.56 0.38 0.02 0.1 0.72 0.12 0.91 1.7 1.81 0.02 0.0 2.0 0.32 0.2 0.07 0.36 0.61 0.67 0.57 0.39 0.36 0.35
0.57 0.93 1.13 0.86 1.02 0.85 1.29 1.47 0.95 1.59 1.94 1.01 1.48 1.54 4.9 2.63 0.67 2.36 1.36 0.0 0.39 3.29 0.83 1.08 0.6 1.1 1.35 1.19 0.45 0.64 0.84 1.48
16.95 16.88 20.05 18.88 19.43 17.72 21.3 25.92 25.39 29.83 25.59 22.69 21.71 12.43 11.67 17.87 9.16 6.97 10.45 18.52 9.89 6.33 13.51 13.8 6.81 29.59 13.13 12.86 10.84 10.73 10.43 9.77
2.41 2.41 2.8 3.09 2.86 3.27 4.06 3.65 2.54 3.6 2.76 3.14 4.58 2.72 5.36 3.55 1.28 5.73 4.99 0.04 0.0 6.43 2.99 3.87 2.58 3.92 3.15 3.11 2.12 2.15 1.32 1.42
18.98 13.72 14.59 13.93 15.36 23.0 21.03 27.4 25.09 25.41 23.45 19.51 23.77 12.8 44.08 27.12 15.54 15.97 22.08 13.37 28.73 42.31 17.04 19.4 11.63 29.12 33.75 27.72 19.35 16.8 22.61 24.48
38.96 38.46 39.2 44.51 45.22 44.5 45.56 48.43 51.36 49.49 49.15 42.12 60.65 47.22 48.72 64.58 22.79 12.97 31.73 33.48 37.68 44.03 36.21 43.36 46.33 52.72 37.79 40.69 22.68 28.64 20.21 17.87
20.43 18.26 17.58 27.98 21.72 24.18 22.07 24.52 24.59 25.22 26.65 27.21 132.06 90.36 20.73 80.01 15.94 8.42 12.82 4.14 11.23 62.21 12.29 14.2 16.32 28.73 27.05 29.87 13.98 15.29 13.3 12.2
2.2 1.86 2.56 1.98 1.67 1.86 2.18 2.34 2.01 2.12 2.59 2.24 10.7 4.19 2.46 6.2 0.49 0.39 2.43 0.07 0.09 3.74 1.31 2.26 5.25 7.1 3.23 3.1 0.87 1.01 0.56 0.92
19.36 16.7 16.97 17.94 15.97 17.87 17.49 22.88 25.45 25.08 25.73 21.83 22.99 13.43 11.18 12.66 6.75 4.43 9.41 10.38 9.33 21.58 10.85 14.71 5.32 18.13 9.38 10.34 9.23 9.74 7.96 9.01
10.03 8.97 7.84 9.51 11.68 9.53 9.08 10.62 9.29 11.09 10.72 10.46 24.14 23.11 11.44 12.85 5.78 2.73 8.4 2.42 15.77 11.63 6.79 7.12 11.79 9.77 8.6 7.04 5.83 6.51 7.15 9.36
1.44 2.93 2.0 2.11 0.96 2.7 2.49 1.26 2.01 3.41 2.76 1.88 6.05 3.79 6.08 4.82 3.0 4.29 5.8 0.31 2.09 4.8 4.12 4.21 1.69 3.78 2.21 1.06 3.45 4.44 4.04 4.87
9.31 7.98 11.01 8.55 10.1 11.51 9.25 9.17 11.16 12.28 13.17 9.49 32.88 21.78 17.94 15.61 10.51 8.96 3.67 10.67 14.22 29.36 11.53 10.09 4.88 5.33 6.97 10.22 6.21 6.89 4.11 6.8
2.35 3.27 1.21 2.76 1.9 1.87 1.46 1.6 1.36 3.44 4.95 1.48 11.46 2.73 9.08 9.14 1.82 0.18 6.55 1.21 4.54 10.77 3.02 4.31 8.44 7.1 5.88 6.92 2.18 2.51 0.68 1.63
41.21 46.78 51.2 53.04 52.79 52.82 62.7 62.51 74.69 79.48 78.27 63.55 88.86 71.39 95.04 95.08 40.63 28.8 49.1 38.39 25.2 73.46 61.12 69.8 69.99 57.08 28.52 35.77 44.63 55.14 29.19 28.18
0.34 0.57 0.25 0.5 0.45 0.59 0.63 0.98 0.61 1.51 1.23 0.35 3.36 0.68 1.5 0.85 0.48 0.33 0.99 0.19 0.0 2.94 0.52 0.36 1.36 1.24 0.39 0.0 0.36 0.58 0.1 0.25
0.33 0.98 0.58 0.72 0.95 0.45 0.81 0.39 0.81 0.43 0.68 0.48 4.74 2.26 1.1 2.47 0.61 0.6 1.1 0.24 0.0 4.16 1.41 2.13 0.24 1.16 0.67 1.11 0.59 0.6 0.44 0.36
3.19 3.81 3.78 3.47 3.55 3.68 3.56 4.64 3.73 3.97 4.03 3.1 7.87 3.98 1.83 6.06 3.02 2.6 4.16 1.84 2.59 1.11 2.75 3.17 7.38 5.78 5.42 4.39 3.24 3.17 3.1 3.76
1.75 1.13 1.88 1.98 1.03 1.83 1.44 1.74 2.67 2.14 1.75 2.18 3.99 3.75 4.58 4.16 0.5 0.69 1.24 0.09 0.77 4.25 0.67 0.8 0.48 2.74 1.69 2.08 0.55 0.5 0.28 0.35
30.18 32.8 32.59 32.56 39.03 38.77 28.76 32.66 35.06 32.53 36.49 34.43 49.26 43.26 33.67 44.24 22.35 20.44 37.5 30.4 38.1 47.02 36.12 40.56 30.37 21.38 18.84 19.67 26.27 25.25 16.21 20.44
2.87 2.56 2.64 2.7 2.05 3.51 2.27 1.69 2.89 2.79 2.6 2.47 2.05 1.39 4.17 2.42 2.4 1.62 3.02 0.11 0.92 5.53 2.56 2.24 1.33 1.82 1.75 2.57 1.58 1.82 2.07 2.54
3.25 3.85 3.3 3.23 4.32 3.18 4.05 4.31 5.76 6.27 5.99 5.88 2.54 3.01 4.92 2.73 1.59 0.41 5.86 0.33 1.95 8.15 1.95 2.77 2.74 11.95 3.48 2.43 1.74 2.07 1.98 2.03
0.22 0.2 0.13 0.28 0.04 0.28 0.38 0.29 0.22 0.11 0.12 0.38 2.58 0.22 0.01 1.19 0.3 0.72 1.1 0.0 0.41 0.0 0.35 0.27 0.46 1.75 0.51 0.48 0.31 0.23 0.02 0.12
5.65 5.93 5.03 4.71 4.63 4.14 5.29 4.88 5.32 5.71 4.43 6.88 4.45 5.15 5.69 5.91 2.59 2.6 4.69 0.54 0.93 5.9 4.49 5.26 1.41 4.24 3.87 3.33 2.97 3.59 5.23 5.81
10.28 11.07 12.43 8.78 9.98 8.91 7.69 7.14 7.28 8.84 9.74 8.8 6.71 2.75 10.07 8.19 9.65 7.03 18.21 7.96 2.71 22.76 4.35 3.29 0.18 5.24 6.85 8.89 5.74 7.3 5.35 4.77
22.58 20.15 18.14 23.67 25.35 22.14 22.11 28.09 27.24 24.37 22.84 24.03 45.02 5.62 11.1 20.08 15.8 1.24 22.51 14.3 15.78 12.05 16.5 18.05 27.27 26.81 22.85 24.11 15.69 16.93 18.54 18.88
5.16 1.6 1.63 1.38 1.8 0.66 0.91 1.76 1.56 3.46 5.11 5.87 13.28 4.03 1.37 4.72 0.15 0.06 3.8 0.38 1.84 7.35 0.35 1.35 7.27 12.41 1.64 0.67 0.81 0.88 1.75 1.25
16.3 22.03 19.19 19.05 18.55 14.46 17.69 10.28 14.08 16.34 16.81 11.89 22.92 22.53 14.47 30.25 15.42 10.08 13.9 3.25 0.96 20.67 40.95 29.1 1.33 3.69 7.05 8.79 16.56 19.34 11.79 10.06
0.53 0.78 0.45 0.75 0.78 0.76 0.61 0.72 0.8 0.9 0.53 0.66 4.74 1.77 2.08 3.47 0.62 0.25 1.31 0.19 1.17 4.79 0.97 1.25 0.71 0.9 0.4 0.73 0.56 0.59 0.29 0.36
2.45 2.37 2.46 2.06 2.6 2.46 1.93 2.22 2.38 2.26 2.22 2.46 6.15 4.69 2.35 5.86 0.66 0.47 1.38 0.77 2.95 5.0 1.23 1.43 1.91 3.9 1.91 1.6 0.75 0.91 0.51 0.56
0.02 0.02 0.0 0.0 0.0 0.0 0.03 0.07 0.08 0.03 0.0 0.07 2.17 0.8 0.01 1.6 0.05 0.1 0.2 0.03 0.0 1.02 0.05 0.02 0.0 0.0 0.51 0.0 0.09 0.0 0.03 0.0
3.7 4.83 4.16 4.28 3.95 5.95 6.01 2.83 6.15 4.03 4.91 4.18 10.77 11.81 1.64 9.37 4.58 8.06 1.24 0.0 0.0 12.9 20.93 15.12 1.4 1.74 1.26 1.11 3.99 5.12 5.26 4.88
60.62 36.57 38.81 51.74 50.59 36.67 52.7 80.97 79.57 80.96 88.52 79.24 53.25 25.16 27.98 33.49 8.21 4.61 14.95 30.39 13.05 16.37 16.67 22.27 20.53 83.04 21.59 19.39 13.64 12.92 13.84 14.67
65.45 39.47 51.25 65.97 60.92 54.39 68.29 112.71 100.71 104.51 110.54 87.22 116.25 45.32 52.96 68.06 15.88 4.16 33.4 50.93 25.34 79.26 30.76 44.9 39.55 138.35 32.05 25.72 25.03 22.3 27.63 30.46
9.43 7.23 6.6 6.98 9.15 8.29 7.39 8.14 9.37 9.83 8.76 6.92 10.06 8.13 10.73 12.24 4.16 3.79 12.64 5.62 7.78 10.16 5.77 6.44 9.55 13.33 12.44 8.81 6.41 6.89 5.99 6.96
20.63 17.11 19.71 17.31 10.83 18.86 17.62 27.08 26.8 23.2 28.2 24.53 13.6 18.23 13.49 12.87 7.66 1.57 13.19 1.3 5.96 24.68 10.75 12.6 8.89 13.35 15.17 12.26 11.35 11.52 25.27 20.7
82.53 132.8 314.27 465.94 512.86 435.94 478.44 747.69 490.39 422.66 288.95 170.96 642.21 103.01 16.83 668.15 96.8 77.82 388.93 76.03 406.81 16.1 378.65 468.48 233.48 1344.04 422.66 334.0 269.56 245.38 286.06 373.91
9.31 6.55 7.32 7.34 9.35 7.36 6.1 8.75 9.72 11.2 13.96 10.49 18.54 10.56 11.06 10.69 3.19 1.28 6.61 2.74 3.52 11.26 3.79 5.75 6.57 12.25 6.77 6.99 3.8 3.95 6.41 8.22
2.54 1.75 1.57 2.19 2.47 2.13 2.45 3.53 3.11 3.69 3.03 2.54 8.74 1.76 8.53 10.88 1.88 2.16 12.25 3.34 5.66 10.14 2.27 3.04 1.83 1.62 0.87 1.34 3.09 3.2 3.54 4.63
24.78 23.74 22.65 30.69 26.36 33.73 24.41 28.63 28.32 27.47 25.62 27.04 26.36 26.73 30.38 28.81 12.78 10.85 19.59 19.79 14.96 29.38 21.07 21.51 28.27 30.45 23.84 26.31 15.4 14.85 11.53 11.65
13.07 13.25 10.14 12.78 13.32 14.16 11.92 12.47 12.95 12.36 11.99 12.37 12.84 11.62 15.62 15.29 9.32 9.02 14.44 5.77 7.45 27.41 12.65 12.17 11.69 10.31 10.69 10.33 9.45 11.11 10.9 9.72
87.33 85.56 84.12 82.59 85.32 82.76 84.77 100.9 101.82 122.6 116.96 105.36 111.16 149.3 94.6 100.31 64.04 95.58 77.12 49.03 101.01 145.31 87.37 95.2 44.74 173.11 98.26 104.61 66.48 59.22 67.57 66.99
3.52 3.06 2.39 3.58 3.26 3.21 3.8 3.19 3.95 4.73 6.23 4.17 8.42 3.9 5.93 2.98 0.95 0.59 2.15 1.52 0.68 4.42 1.27 2.35 3.55 7.21 3.99 2.21 0.96 1.5 2.07 2.4
1.03 0.83 1.73 1.42 1.38 1.57 1.19 1.49 1.23 0.9 1.27 1.09 4.49 1.24 1.96 4.92 1.68 0.91 2.38 1.93 1.13 6.06 1.97 2.27 1.78 1.62 2.68 1.93 1.72 1.86 1.01 1.07
13.68 20.08 25.5 33.73 35.66 36.66 45.08 48.66 30.46 26.08 24.0 21.35 105.46 11.0 8.83 59.51 19.3 19.28 56.54 6.14 36.61 67.17 19.52 21.17 77.63 26.34 17.51 17.42 26.74 23.5 16.26 22.68
15.93 10.73 18.94 26.29 21.98 18.83 25.2 32.47 34.41 28.29 34.92 24.07 72.77 28.89 18.74 44.35 11.09 11.34 21.56 4.11 26.62 68.84 39.46 54.54 13.51 59.08 20.42 23.24 23.09 22.15 16.65 31.99
34.15 36.66 39.71 49.44 59.63 52.95 41.74 43.72 42.78 47.95 43.02 36.89 66.94 44.58 48.89 65.54 41.75 31.46 49.58 21.13 44.2 112.25 57.73 65.27 33.69 29.87 40.71 41.67 38.21 39.18 40.51 40.76
4.13 8.45 19.61 22.44 22.5 25.28 21.03 10.8 7.11 5.17 3.72 3.29 47.16 66.35 34.58 51.01 26.01 16.04 8.29 12.92 9.94 139.65 67.03 59.89 9.25 2.51 10.03 8.61 17.38 16.7 6.96 6.03
23.06 25.8 26.0 24.4 26.25 19.38 16.52 21.63 22.98 22.96 19.82 17.22 37.14 18.71 17.72 38.29 15.72 17.95 28.37 8.54 6.27 44.24 24.13 26.99 10.66 25.46 18.29 22.6 20.04 21.79 20.43 21.29

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)