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Heatmap: Cluster_23 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
- - - - - - - - - - - - 4.01 - - -0.79 - - -1.1 - - 3.62 -1.13 - - - - - 1.09 - - -
-0.15 -0.27 -0.12 0.15 0.28 0.17 0.35 0.49 0.36 0.45 0.29 0.17 0.35 -0.14 0.35 0.13 -0.62 -0.88 0.09 -1.25 -0.19 0.61 -0.07 0.16 0.08 0.35 -0.32 -0.37 -0.32 -0.36 -0.93 -0.96
0.22 0.43 0.03 -0.19 0.01 0.26 0.08 0.12 0.46 0.39 0.09 0.27 0.28 -0.65 -0.34 0.89 -0.53 -0.74 0.17 -4.94 - 1.2 0.48 0.66 -5.66 -0.38 -0.38 -1.0 0.01 0.03 0.11 -0.14
-0.33 -0.09 -0.62 -0.23 -0.87 -0.29 -0.47 -0.36 -0.45 -0.37 -0.32 -0.25 0.87 1.87 0.1 1.43 -1.36 -0.49 -1.41 -7.57 -1.32 1.61 0.01 0.65 0.75 -1.56 -0.76 -0.63 -1.07 -0.8 -0.39 -0.11
-0.4 -0.5 -1.22 -0.3 0.13 -0.36 -0.48 -0.5 -0.36 -0.38 0.06 -0.44 0.54 0.06 0.57 0.68 0.06 -0.16 0.67 0.37 -0.25 0.77 -0.51 -0.34 0.34 0.03 0.08 -0.29 0.3 0.01 -0.15 -0.08
-0.27 0.1 -0.32 0.36 0.02 0.47 0.14 -0.04 -0.13 -0.17 -0.23 -0.51 -0.05 -0.89 0.46 0.66 -0.35 0.38 0.22 -3.21 -0.11 1.17 0.45 -0.02 -0.45 -0.39 0.35 0.27 -0.17 -0.01 -0.85 -1.29
0.1 0.02 -0.09 -0.09 -0.09 -0.05 -0.13 0.06 0.07 0.16 0.21 0.18 1.01 0.06 -0.07 0.87 -0.6 -0.53 0.1 -0.82 -0.68 0.63 0.15 0.22 -0.14 -0.23 -0.75 -0.93 -0.29 -0.29 -0.31 0.18
0.1 -0.14 -1.13 -0.38 -0.15 -0.37 -0.16 -0.15 0.03 -0.16 0.07 -0.26 1.51 0.76 -0.34 1.29 -1.06 -1.36 -0.09 -3.31 0.85 0.9 -0.7 -0.32 0.7 0.01 -0.47 -0.37 -0.96 -0.83 -0.18 -0.5
0.47 -0.07 -0.05 -0.07 -0.62 0.06 -0.85 0.39 0.03 0.35 -0.39 0.43 -0.77 0.17 0.59 -0.52 -0.48 1.13 -0.04 -4.44 0.92 0.03 -1.07 -0.57 0.08 0.41 0.42 0.85 -0.38 -0.21 -1.09 -1.93
-1.45 -0.69 0.33 0.61 1.11 0.18 -0.91 -0.23 -0.88 -1.14 -1.34 -1.88 2.08 0.52 -2.37 0.89 -3.67 -3.09 0.43 -2.39 -2.38 -2.97 -0.73 0.94 1.33 2.45 -0.75 -1.33 -2.9 -2.68 -2.51 -2.49
-0.13 - -1.66 -3.37 - -1.32 0.04 -0.94 - -0.71 -0.0 0.33 1.71 2.78 -0.99 2.47 - -2.88 -1.76 - 1.05 1.91 - - -0.04 0.49 -1.44 - -1.37 - -2.84 -2.9
-0.57 -0.01 -0.35 -0.25 0.01 0.34 0.18 -0.14 0.42 0.21 0.3 -0.66 0.38 0.11 0.91 0.53 -0.06 -0.14 0.71 - -2.24 0.95 -0.16 -0.09 -1.35 -0.05 0.22 0.16 0.25 0.27 -1.46 -1.08
-0.36 -0.54 -0.57 -0.37 0.1 -0.14 -0.15 0.38 0.35 0.29 -0.08 -0.27 1.37 -0.88 0.07 0.25 -0.65 -0.92 0.34 -0.98 -0.2 -1.78 -0.06 0.41 0.51 1.25 0.1 0.1 -0.36 -0.14 -0.61 -0.77
-0.06 -0.61 -0.2 -0.16 -1.19 0.14 0.29 0.65 0.76 0.17 0.41 0.04 2.08 -1.97 -2.01 0.1 -1.85 -1.47 0.68 - -0.53 - -0.57 -0.1 1.29 1.76 -0.54 0.02 -2.03 -1.42 -1.61 -1.77
0.01 0.16 0.16 0.19 0.08 0.03 -0.03 -0.01 -0.16 0.21 0.1 -0.06 -0.37 -0.27 0.47 -0.15 -0.27 0.16 0.47 -2.96 0.37 0.14 -0.07 -0.23 0.19 0.56 0.22 0.37 -0.32 -0.31 -0.68 -0.64
-0.26 -0.18 -0.11 -0.08 -0.01 0.11 0.51 0.36 0.22 0.42 0.29 0.01 0.31 0.14 0.87 0.72 -0.38 -0.81 0.21 -1.22 0.15 0.45 0.01 0.16 -1.12 -0.49 -0.53 -0.4 -0.44 -0.43 -0.22 -0.76
-0.53 0.19 1.11 0.49 -0.78 0.18 0.76 -0.63 -0.57 -0.58 -0.03 -0.61 -5.02 -2.47 0.32 -2.31 0.65 1.56 1.65 -5.0 - 1.8 -0.83 -1.56 -3.14 -0.67 0.09 0.21 -0.02 -0.56 -0.66 -0.73
-1.2 -0.49 -0.21 -0.6 -0.36 -0.61 -0.02 0.17 -0.46 0.29 0.57 -0.37 0.18 0.24 1.91 1.01 -0.95 0.85 0.06 - -1.75 1.33 -0.65 -0.27 -1.12 -0.25 0.05 -0.13 -1.52 -1.02 -0.64 0.18
0.07 0.06 0.31 0.22 0.27 0.13 0.4 0.68 0.65 0.88 0.66 0.49 0.43 -0.38 -0.47 0.15 -0.82 -1.21 -0.63 0.2 -0.71 -1.35 -0.26 -0.23 -1.25 0.87 -0.3 -0.33 -0.58 -0.59 -0.63 -0.73
-0.35 -0.35 -0.13 0.01 -0.1 0.1 0.41 0.25 -0.27 0.24 -0.15 0.04 0.58 -0.17 0.81 0.21 -1.25 0.91 0.71 -6.42 - 1.07 -0.03 0.34 -0.25 0.36 0.04 0.03 -0.53 -0.51 -1.22 -1.11
-0.22 -0.69 -0.6 -0.67 -0.53 0.05 -0.08 0.31 0.18 0.2 0.08 -0.18 0.1 -0.79 0.99 0.29 -0.51 -0.47 -0.01 -0.73 0.37 0.93 -0.38 -0.19 -0.93 0.39 0.61 0.32 -0.2 -0.4 0.03 0.14
-0.05 -0.06 -0.04 0.15 0.17 0.15 0.18 0.27 0.35 0.3 0.29 0.07 0.59 0.23 0.28 0.68 -0.82 -1.63 -0.34 -0.26 -0.09 0.13 -0.15 0.11 0.2 0.39 -0.09 0.02 -0.83 -0.49 -0.99 -1.17
-0.46 -0.63 -0.68 -0.01 -0.38 -0.22 -0.35 -0.2 -0.2 -0.16 -0.08 -0.05 2.23 1.68 -0.44 1.51 -0.82 -1.74 -1.14 -2.77 -1.33 1.14 -1.2 -0.99 -0.79 0.03 -0.06 0.08 -1.01 -0.88 -1.08 -1.21
-0.22 -0.46 -0.0 -0.37 -0.62 -0.46 -0.24 -0.13 -0.35 -0.27 0.02 -0.19 2.06 0.71 -0.06 1.28 -2.4 -2.71 -0.08 -5.15 -4.83 0.55 -0.97 -0.18 1.04 1.47 0.33 0.27 -1.56 -1.35 -2.19 -1.47
0.4 0.19 0.21 0.29 0.12 0.28 0.25 0.64 0.79 0.77 0.81 0.57 0.65 -0.13 -0.39 -0.21 -1.12 -1.73 -0.64 -0.5 -0.65 0.55 -0.44 0.0 -1.47 0.3 -0.65 -0.51 -0.67 -0.59 -0.88 -0.71
0.02 -0.14 -0.34 -0.06 0.24 -0.06 -0.13 0.1 -0.09 0.16 0.11 0.08 1.28 1.22 0.21 0.38 -0.78 -1.86 -0.24 -2.04 0.67 0.23 -0.55 -0.48 0.25 -0.02 -0.2 -0.49 -0.76 -0.61 -0.47 -0.08
-1.13 -0.11 -0.66 -0.58 -1.72 -0.23 -0.34 -1.32 -0.65 0.12 -0.19 -0.74 0.94 0.27 0.95 0.61 -0.07 0.44 0.88 -3.33 -0.6 0.61 0.39 0.42 -0.9 0.26 -0.51 -1.57 0.13 0.49 0.36 0.63
-0.28 -0.5 -0.04 -0.4 -0.16 0.03 -0.29 -0.3 -0.02 0.12 0.22 -0.25 1.54 0.95 0.67 0.47 -0.1 -0.34 -1.62 -0.08 0.33 1.38 0.03 -0.16 -1.21 -1.08 -0.7 -0.14 -0.86 -0.71 -1.46 -0.73
-0.76 -0.29 -1.73 -0.53 -1.08 -1.1 -1.45 -1.32 -1.55 -0.21 0.31 -1.43 1.52 -0.55 1.19 1.19 -1.13 -4.46 0.71 -1.73 0.18 1.43 -0.4 0.11 1.08 0.83 0.56 0.79 -0.87 -0.67 -2.55 -1.29
-0.45 -0.27 -0.14 -0.09 -0.1 -0.09 0.15 0.15 0.41 0.5 0.47 0.17 0.66 0.34 0.75 0.75 -0.47 -0.97 -0.2 -0.55 -1.16 0.38 0.12 0.31 0.31 0.02 -0.98 -0.66 -0.34 -0.03 -0.95 -1.0
-1.19 -0.43 -1.63 -0.61 -0.77 -0.36 -0.28 0.35 -0.34 0.98 0.69 -1.12 2.13 -0.17 0.97 0.15 -0.67 -1.22 0.36 -2.05 - 1.94 -0.55 -1.09 0.83 0.7 -0.96 - -1.1 -0.4 -2.88 -1.62
-1.67 -0.09 -0.86 -0.55 -0.14 -1.22 -0.37 -1.44 -0.38 -1.28 -0.62 -1.12 2.17 1.11 0.07 1.23 -0.77 -0.81 0.06 -2.1 - 1.99 0.42 1.02 -2.1 0.15 -0.66 0.07 -0.83 -0.82 -1.27 -1.54
-0.25 0.0 -0.01 -0.13 -0.1 -0.05 -0.09 0.29 -0.03 0.06 0.08 -0.3 1.05 0.06 -1.05 0.67 -0.33 -0.55 0.13 -1.05 -0.56 -1.78 -0.47 -0.26 0.96 0.6 0.51 0.21 -0.23 -0.26 -0.29 -0.02
0.01 -0.63 0.11 0.19 -0.76 0.07 -0.28 -0.0 0.62 0.3 0.01 0.33 1.2 1.11 1.4 1.26 -1.79 -1.34 -0.49 -4.24 -1.17 1.29 -1.37 -1.12 -1.85 0.65 -0.04 0.26 -1.66 -1.79 -2.66 -2.3
-0.09 0.03 0.02 0.02 0.28 0.27 -0.16 0.02 0.13 0.02 0.18 0.1 0.62 0.43 0.07 0.46 -0.52 -0.65 0.22 -0.08 0.25 0.55 0.17 0.34 -0.08 -0.59 -0.77 -0.71 -0.29 -0.35 -0.99 -0.65
0.29 0.13 0.17 0.2 -0.19 0.58 -0.04 -0.47 0.31 0.25 0.15 0.08 -0.19 -0.76 0.83 0.05 0.04 -0.53 0.36 -4.38 -1.36 1.24 0.13 -0.07 -0.81 -0.37 -0.42 0.14 -0.57 -0.37 -0.18 0.12
-0.18 0.06 -0.16 -0.19 0.23 -0.21 0.13 0.22 0.64 0.77 0.7 0.67 -0.54 -0.29 0.42 -0.43 -1.21 -3.17 0.67 -3.49 -0.92 1.14 -0.92 -0.41 -0.43 1.7 -0.09 -0.6 -1.09 -0.83 -0.9 -0.86
-0.99 -1.11 -1.77 -0.6 -3.32 -0.61 -0.18 -0.55 -0.99 -1.9 -1.81 -0.18 2.59 -0.93 -5.09 1.47 -0.5 0.75 1.36 - -0.08 - -0.28 -0.65 0.11 2.03 0.27 0.18 -0.46 -0.87 -4.37 -1.85
0.36 0.43 0.19 0.09 0.07 -0.09 0.26 0.15 0.27 0.37 0.01 0.64 0.01 0.22 0.37 0.42 -0.77 -0.77 0.09 -3.04 -2.25 0.42 0.03 0.25 -1.64 -0.06 -0.19 -0.41 -0.57 -0.3 0.24 0.4
0.35 0.45 0.62 0.12 0.3 0.14 -0.07 -0.18 -0.15 0.13 0.27 0.12 -0.27 -1.56 0.32 0.02 0.25 -0.2 1.17 -0.02 -1.58 1.49 -0.89 -1.3 -5.53 -0.63 -0.24 0.14 -0.5 -0.15 -0.6 -0.76
0.15 -0.01 -0.16 0.22 0.32 0.12 0.12 0.47 0.42 0.26 0.17 0.24 1.15 -1.85 -0.87 -0.02 -0.36 -4.03 0.15 -0.51 -0.36 -0.75 -0.3 -0.17 0.43 0.4 0.17 0.25 -0.37 -0.26 -0.13 -0.11
0.78 -0.91 -0.89 -1.12 -0.74 -2.19 -1.72 -0.77 -0.95 0.2 0.76 0.97 2.14 0.42 -1.13 0.65 -4.33 -5.65 0.34 -2.97 -0.71 1.29 -3.12 -1.15 1.27 2.04 -0.88 -2.16 -1.89 -1.78 -0.78 -1.27
0.06 0.5 0.3 0.29 0.25 -0.11 0.18 -0.6 -0.15 0.07 0.11 -0.39 0.55 0.53 -0.11 0.95 -0.02 -0.63 -0.17 -2.26 -4.02 0.4 1.39 0.9 -3.55 -2.08 -1.15 -0.83 0.08 0.31 -0.41 -0.63
-1.08 -0.5 -1.29 -0.57 -0.5 -0.54 -0.86 -0.62 -0.47 -0.29 -1.06 -0.76 2.1 0.68 0.91 1.65 -0.84 -2.15 0.24 -2.57 0.08 2.11 -0.19 0.17 -0.63 -0.29 -1.48 -0.61 -0.98 -0.91 -1.93 -1.6
0.1 0.06 0.11 -0.15 0.19 0.11 -0.24 -0.04 0.06 -0.01 -0.04 0.11 1.44 1.04 0.05 1.36 -1.79 -2.28 -0.72 -1.56 0.38 1.13 -0.89 -0.67 -0.25 0.78 -0.25 -0.51 -1.6 -1.32 -2.17 -2.02
-3.37 -3.38 - - - - -2.9 -1.63 -1.51 -2.91 - -1.62 3.31 1.87 -3.95 2.87 -2.07 -1.12 -0.14 -3.03 - 2.22 -2.16 -3.27 - - 1.21 - -1.23 - -3.1 -
-0.57 -0.19 -0.4 -0.36 -0.48 0.11 0.13 -0.96 0.16 -0.45 -0.17 -0.4 0.97 1.1 -1.74 0.77 -0.27 0.55 -2.15 - - 1.23 1.93 1.46 -1.97 -1.66 -2.13 -2.31 -0.46 -0.11 -0.07 -0.17
0.69 -0.04 0.05 0.46 0.43 -0.04 0.49 1.11 1.08 1.11 1.24 1.08 0.5 -0.58 -0.43 -0.17 -2.2 -3.03 -1.33 -0.31 -1.53 -1.2 -1.17 -0.76 -0.87 1.14 -0.8 -0.96 -1.46 -1.54 -1.44 -1.36
0.19 -0.53 -0.16 0.21 0.09 -0.07 0.26 0.98 0.82 0.87 0.95 0.61 1.02 -0.34 -0.11 0.25 -1.85 -3.78 -0.78 -0.17 -1.17 0.47 -0.89 -0.35 -0.53 1.27 -0.84 -1.15 -1.19 -1.36 -1.05 -0.91
0.18 -0.2 -0.33 -0.25 0.14 -0.0 -0.17 -0.03 0.17 0.24 0.08 -0.26 0.27 -0.03 0.37 0.56 -1.0 -1.13 0.6 -0.57 -0.1 0.29 -0.53 -0.37 0.2 0.68 0.58 0.08 -0.38 -0.27 -0.47 -0.26
0.38 0.11 0.32 0.13 -0.55 0.25 0.16 0.78 0.76 0.55 0.83 0.63 -0.22 0.2 -0.23 -0.3 -1.05 -3.33 -0.26 -3.61 -1.41 0.64 -0.56 -0.33 -0.83 -0.25 -0.06 -0.37 -0.48 -0.46 0.68 0.39
-2.11 -1.42 -0.18 0.39 0.53 0.29 0.43 1.07 0.46 0.25 -0.3 -1.06 0.85 -1.79 -4.4 0.91 -1.88 -2.19 0.13 -2.23 0.19 -4.47 0.09 0.4 -0.61 1.92 0.25 -0.09 -0.4 -0.54 -0.32 0.07
0.24 -0.26 -0.1 -0.1 0.25 -0.09 -0.37 0.16 0.31 0.51 0.83 0.42 1.24 0.43 0.49 0.44 -1.3 -2.61 -0.25 -1.52 -1.16 0.52 -1.05 -0.45 -0.26 0.64 -0.22 -0.17 -1.05 -0.99 -0.29 0.07
-0.58 -1.12 -1.28 -0.8 -0.62 -0.84 -0.64 -0.11 -0.29 -0.04 -0.33 -0.59 1.2 -1.11 1.17 1.52 -1.02 -0.82 1.69 -0.19 0.57 1.41 -0.75 -0.33 -1.06 -1.23 -2.12 -1.51 -0.3 -0.25 -0.1 0.28
0.08 0.02 -0.05 0.39 0.17 0.53 0.06 0.29 0.28 0.23 0.13 0.21 0.17 0.19 0.38 0.3 -0.87 -1.11 -0.26 -0.24 -0.64 0.33 -0.15 -0.12 0.27 0.38 0.03 0.17 -0.6 -0.65 -1.02 -1.01
0.11 0.13 -0.26 0.07 0.13 0.22 -0.03 0.04 0.09 0.03 -0.02 0.03 0.08 -0.06 0.36 0.33 -0.38 -0.43 0.25 -1.07 -0.7 1.17 0.06 0.0 -0.05 -0.24 -0.18 -0.23 -0.36 -0.13 -0.16 -0.32
-0.1 -0.13 -0.15 -0.18 -0.13 -0.18 -0.14 0.11 0.12 0.39 0.32 0.17 0.25 0.68 0.02 0.1 -0.55 0.03 -0.28 -0.93 0.11 0.64 -0.1 0.03 -1.06 0.89 0.07 0.16 -0.49 -0.66 -0.47 -0.48
0.11 -0.09 -0.45 0.14 0.0 -0.02 0.22 -0.03 0.28 0.54 0.94 0.36 1.37 0.26 0.87 -0.13 -1.78 -2.46 -0.6 -1.09 -2.26 0.44 -1.35 -0.47 0.13 1.15 0.29 -0.56 -1.76 -1.11 -0.66 -0.44
-0.85 -1.17 -0.11 -0.4 -0.44 -0.25 -0.65 -0.33 -0.6 -1.06 -0.55 -0.78 1.27 -0.59 0.07 1.4 -0.16 -1.03 0.35 0.05 -0.73 1.7 0.08 0.28 -0.07 -0.2 0.52 0.05 -0.12 -0.0 -0.88 -0.8
-1.22 -0.67 -0.32 0.08 0.16 0.2 0.5 0.61 -0.06 -0.29 -0.41 -0.58 1.73 -1.53 -1.85 0.9 -0.72 -0.72 0.83 -2.38 0.2 1.08 -0.71 -0.59 1.28 -0.27 -0.86 -0.87 -0.25 -0.44 -0.97 -0.49
-0.83 -1.4 -0.58 -0.1 -0.36 -0.59 -0.17 0.2 0.28 0.0 0.31 -0.23 1.36 0.03 -0.59 0.65 -1.35 -1.32 -0.39 -2.78 -0.09 1.28 0.48 0.95 -1.07 1.06 -0.47 -0.28 -0.29 -0.35 -0.76 0.18
-0.44 -0.34 -0.22 0.09 0.36 0.19 -0.15 -0.08 -0.11 0.05 -0.11 -0.33 0.53 -0.06 0.08 0.5 -0.15 -0.56 0.1 -1.13 -0.07 1.28 0.32 0.49 -0.46 -0.63 -0.19 -0.15 -0.28 -0.24 -0.19 -0.18
-2.54 -1.51 -0.29 -0.1 -0.1 0.07 -0.19 -1.16 -1.76 -2.22 -2.69 -2.87 0.97 1.46 0.52 1.08 0.11 -0.59 -1.54 -0.9 -1.28 2.54 1.48 1.32 -1.38 -3.26 -1.26 -1.48 -0.47 -0.53 -1.79 -2.0
0.05 0.22 0.23 0.14 0.24 -0.2 -0.43 -0.04 0.05 0.05 -0.16 -0.37 0.74 -0.25 -0.33 0.79 -0.5 -0.31 0.35 -1.38 -1.83 0.99 0.12 0.28 -1.06 0.2 -0.28 0.03 -0.15 -0.03 -0.12 -0.06

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.