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Heatmap: Cluster_53 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00001p00188360 (evm_27.TU.AmTr_v1.0_scaffold00001.186)
 0.0 0.0 0.0 0.0 1.03 0.0 0.23 0.0 0.02 0.08 0.64 0.0 0.07 0.16 0.08 0.0 0.32 0.0 0.0 0.04 0.56 0.15
AMTR_s00001p00272740 (evm_27.TU.AmTr_v1.0_scaffold00001.558)
 0.0 0.0 0.0 0.0 1.04 0.0 0.0 0.93 0.19 0.1 0.0 0.0 0.05 0.09 0.19 0.0 0.56 0.0 0.0 0.0 1.73 0.2
AMTR_s00003p00249560 (evm_27.TU.AmTr_v1.0_scaffold00003.291)
 0.0 0.0 0.0 0.0 0.22 0.0 0.0 0.0 0.0 0.0 0.38 0.0 0.25 0.0 0.0 0.0 0.0 0.0 0.0 0.01 0.0 0.0
AMTR_s00005p00064930 (evm_27.TU.AmTr_v1.0_scaffold00005.11)
 0.0 0.0 0.0 0.0 0.74 0.0 0.04 0.0 0.0 0.0 0.32 0.0 0.11 0.03 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.13
AMTR_s00007p00219160 (evm_27.TU.AmTr_v1.0_scaffold00007.205)
 0.0 0.0 0.0 0.0 17.17 0.0 0.0 0.0 0.0 0.0 7.06 5.9 1.17 0.1 1.01 0.0 1.49 0.0 0.0 0.0 0.0 10.16
AMTR_s00010p00201640 (evm_27.TU.AmTr_v1.0_scaffold00010.192)
 0.0 4.97 0.0 0.03 0.1 0.0 0.0 0.0 0.0 0.0 5.11 0.57 0.24 0.03 0.0 0.0 0.46 0.0 0.08 0.01 0.15 0.01
AMTR_s00015p00191610 (evm_27.TU.AmTr_v1.0_scaffold00015.40)
 0.0 0.0 0.0 0.0 0.73 0.0 0.16 0.0 0.03 0.22 1.58 0.0 0.27 0.0 0.25 0.0 0.0 0.0 0.0 0.0 0.0 0.09
AMTR_s00015p00218910 (evm_27.TU.AmTr_v1.0_scaffold00015.68)
 0.0 0.0 0.0 0.39 1.09 0.0 0.24 0.0 0.26 0.13 0.28 0.94 0.44 0.21 0.55 0.0 0.0 0.83 0.37 0.37 0.0 0.18
AMTR_s00018p00257790 (evm_27.TU.AmTr_v1.0_scaffold00018.176)
 0.0 0.0 0.0 0.0 0.13 0.0 0.03 0.0 0.03 0.07 0.11 0.0 0.0 0.02 0.0 0.0 0.08 0.0 0.0 0.0 0.0 0.0
AMTR_s00019p00229950 (evm_27.TU.AmTr_v1.0_scaffold00019.310)
 0.0 0.0 0.0 0.45 0.91 0.0 0.0 0.0 0.0 0.0 0.67 0.0 0.37 0.0 0.5 0.0 0.0 0.0 0.2 0.24 0.0 0.0
AMTR_s00019p00252590 (evm_27.TU.AmTr_v1.0_scaffold00019.423)
 0.0 0.0 0.0 0.0 1.49 0.0 0.18 0.0 0.09 0.16 1.28 0.0 0.17 0.2 0.22 0.97 1.31 0.0 0.0 0.49 0.0 0.33
AMTR_s00021p00178000 (evm_27.TU.AmTr_v1.0_scaffold00021.130)
 0.0 0.0 0.0 0.0 0.3 0.0 0.0 0.0 0.0 0.0 0.12 0.0 0.0 0.01 0.01 0.0 0.05 0.35 0.0 0.0 0.16 0.0
AMTR_s00021p00197880 (evm_27.TU.AmTr_v1.0_scaffold00021.161)
 0.0 0.0 0.0 0.0 0.45 0.0 0.0 0.0 0.0 0.0 0.27 0.0 0.12 0.16 0.02 0.0 0.0 0.0 0.0 0.07 0.0 0.12
AMTR_s00021p00249570 (evm_27.TU.AmTr_v1.0_scaffold00021.279)
 0.0 0.0 0.0 0.02 0.39 0.0 0.0 0.0 0.0 0.01 0.15 0.17 0.0 0.01 0.03 0.0 0.04 0.0 0.0 0.1 0.0 0.02
AMTR_s00022p00193300 (evm_27.TU.AmTr_v1.0_scaffold00022.215)
 0.0 0.09 0.0 0.0 0.28 0.0 0.0 0.0 0.0 0.0 0.39 0.0 0.55 0.06 0.0 0.0 0.0 1.0 0.0 0.0 0.0 0.0
AMTR_s00026p00217570 (evm_27.TU.AmTr_v1.0_scaffold00026.118)
 0.0 0.0 0.0 0.0 0.53 0.0 0.0 0.0 0.0 0.0 0.46 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00030p00134840 (evm_27.TU.AmTr_v1.0_scaffold00030.81)
 0.0 0.0 0.0 0.0 1.38 0.0 0.49 0.0 0.23 0.22 5.46 0.0 0.89 0.64 0.7 1.87 0.0 0.0 0.0 0.7 0.0 0.21
AMTR_s00030p00135870 (evm_27.TU.AmTr_v1.0_scaffold00030.85)
 0.0 0.0 0.0 0.0 0.24 0.0 0.01 0.0 0.14 0.04 0.2 0.0 0.05 0.1 0.14 0.0 0.0 0.0 0.05 0.0 0.09 0.05
AMTR_s00032p00117510 (evm_27.TU.AmTr_v1.0_scaffold00032.81)
 0.0 0.0 0.0 0.0 0.06 0.0 0.0 0.0 0.0 0.0 0.03 0.0 0.02 0.0 0.0 0.0 0.03 0.0 0.0 0.0 0.0 0.0
AMTR_s00036p00122620 (evm_27.TU.AmTr_v1.0_scaffold00036.52)
 0.0 0.0 0.0 0.0 0.59 0.0 0.0 0.0 0.0 0.03 0.43 0.71 0.06 0.03 0.27 0.0 0.32 0.0 0.6 0.24 0.0 0.29
AMTR_s00037p00237420 (evm_27.TU.AmTr_v1.0_scaffold00037.159)
 0.0 0.0 0.0 0.0 0.0 0.0 0.03 0.0 0.0 0.0 1.47 0.74 0.1 0.0 0.04 1.5 0.19 0.65 0.0 0.0 0.0 0.0
AMTR_s00039p00101600 (evm_27.TU.AmTr_v1.0_scaffold00039.57)
 0.0 0.0 0.0 0.0 0.22 0.0 0.0 0.0 0.0 0.03 0.24 0.0 0.0 0.0 0.02 0.0 0.0 0.0 0.0 0.0 0.0 0.05
AMTR_s00039p00110420 (evm_27.TU.AmTr_v1.0_scaffold00039.67)
 0.0 0.0 0.0 0.0 0.37 0.0 0.0 0.0 0.0 0.0 0.21 0.0 0.0 0.0 0.02 0.47 0.0 0.6 0.0 0.0 0.0 0.05
AMTR_s00039p00211100 (evm_27.TU.AmTr_v1.0_scaffold00039.181)
 0.0 0.0 0.0 0.0 3.6 0.0 0.0 0.0 0.14 0.08 4.17 0.0 0.44 0.48 1.54 0.0 0.0 0.0 0.0 0.45 2.82 0.72
AMTR_s00042p00178940 (evm_27.TU.AmTr_v1.0_scaffold00042.49)
 0.0 0.0 0.0 0.0 0.4 0.0 0.0 0.0 0.01 0.0 2.27 0.0 2.4 0.0 0.0 6.35 0.1 6.96 0.33 0.0 0.32 0.06
AMTR_s00044p00190800 (evm_27.TU.AmTr_v1.0_scaffold00044.208)
 0.0 0.0 0.0 0.0 1.23 0.0 0.0 0.0 0.0 0.0 1.41 0.54 0.59 0.1 0.23 0.0 0.0 0.47 0.24 0.7 0.42 0.19
AMTR_s00049p00175350 (evm_27.TU.AmTr_v1.0_scaffold00049.165)
 0.0 0.0 0.0 0.0 1.11 0.0 0.06 0.0 0.17 0.03 0.97 0.0 0.26 0.0 0.09 0.0 0.38 0.0 0.0 0.0 0.0 0.1
AMTR_s00049p00210820 (evm_27.TU.AmTr_v1.0_scaffold00049.237)
 0.0 0.0 0.13 0.0 2.94 0.0 0.06 2.02 0.5 0.74 1.85 1.07 1.62 0.23 2.78 0.37 0.5 0.0 0.0 0.25 2.11 0.51
AMTR_s00056p00122930 (evm_27.TU.AmTr_v1.0_scaffold00056.91)
 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.03 0.0 1.71 2.87 0.79 0.28 0.0 0.0 0.0 1.26 0.64 0.0 0.0 0.0
AMTR_s00059p00201190 (evm_27.TU.AmTr_v1.0_scaffold00059.225)
 0.0 0.0 0.0 0.0 0.1 0.0 0.0 0.0 0.0 0.0 0.38 0.0 0.24 0.0 0.01 0.0 0.0 0.37 0.0 0.0 0.0 0.4
AMTR_s00060p00103120 (evm_27.TU.AmTr_v1.0_scaffold00060.48)
 0.0 0.0 0.0 0.0 0.29 0.0 0.0 0.0 0.0 0.0 0.16 0.0 0.02 0.0 0.14 0.0 0.0 0.0 0.0 0.0 0.0 0.04
AMTR_s00061p00036000 (evm_27.TU.AmTr_v1.0_scaffold00061.13)
 0.0 0.0 0.0 0.0 7.6 0.0 0.67 0.0 1.01 0.32 4.89 5.5 1.36 1.1 5.9 0.0 0.0 0.0 0.0 1.46 8.64 0.99
AMTR_s00062p00215260 (evm_27.TU.AmTr_v1.0_scaffold00062.239)
 0.0 0.0 0.0 0.0 0.61 0.0 0.0 0.0 0.1 0.0 0.65 0.0 0.39 0.0 0.0 0.0 0.32 0.0 0.0 0.46 0.0 0.0
AMTR_s00065p00160910 (evm_27.TU.AmTr_v1.0_scaffold00065.119)
 0.0 0.0 0.0 0.0 0.89 0.0 0.0 0.0 0.0 0.0 0.94 0.0 0.75 0.0 0.0 0.0 0.0 0.0 0.0 0.67 0.0 0.0
AMTR_s00065p00173470 (evm_27.TU.AmTr_v1.0_scaffold00065.142)
 7.92 4.56 0.0 0.9 0.65 0.0 0.06 0.38 0.01 0.03 13.94 11.49 7.98 0.12 0.36 1.06 2.57 1.83 0.61 0.08 0.41 10.98
AMTR_s00067p00024790 (evm_27.TU.AmTr_v1.0_scaffold00067.9)
 0.0 0.0 0.0 0.0 0.01 0.0 0.0 0.0 0.0 0.0 0.07 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00067p00044530 (evm_27.TU.AmTr_v1.0_scaffold00067.24)
 0.0 0.0 0.0 0.0 0.16 0.0 0.07 0.0 0.0 0.08 0.52 0.0 0.51 0.22 0.47 0.0 0.61 0.0 0.0 0.05 0.0 0.12
AMTR_s00069p00017960 (evm_27.TU.AmTr_v1.0_scaffold00069.4)
 0.0 0.0 0.0 0.0 0.42 0.0 0.0 0.0 0.01 0.0 0.43 0.44 0.03 0.06 0.23 0.0 0.0 0.0 0.09 0.14 0.0 0.01
AMTR_s00069p00078780 (evm_27.TU.AmTr_v1.0_scaffold00069.49)
 25.23 16.36 21.87 13.79 44.69 2.05 5.04 10.99 21.03 23.55 40.17 44.55 17.05 9.63 16.95 59.63 21.39 60.36 23.63 11.54 23.2 8.86
AMTR_s00070p00165510 (evm_27.TU.AmTr_v1.0_scaffold00070.102)
 0.0 0.0 0.0 0.0 1.29 0.0 0.42 0.0 0.38 0.97 1.54 2.36 0.18 0.06 0.15 0.0 1.79 0.0 0.0 0.2 0.0 0.49
AMTR_s00071p00028870 (evm_27.TU.AmTr_v1.0_scaffold00071.13)
 0.0 0.0 0.0 0.0 0.6 0.0 0.0 0.0 0.0 0.0 0.24 0.0 0.0 0.0 0.11 0.0 0.0 0.0 0.35 0.0 0.0 0.0
AMTR_s00071p00195460 (evm_27.TU.AmTr_v1.0_scaffold00071.205)
 0.0 0.0 0.0 0.0 0.56 0.0 0.0 0.0 0.03 0.02 0.32 0.27 0.03 0.07 0.28 0.0 0.0 0.24 0.0 0.02 0.43 0.4
AMTR_s00072p00039120 (evm_27.TU.AmTr_v1.0_scaffold00072.10)
 0.0 0.0 0.0 0.0 1.17 0.0 0.0 0.0 0.0 0.0 0.38 0.0 0.15 0.27 0.06 0.0 0.86 0.0 0.0 0.26 0.0 0.14
AMTR_s00077p00066700 (evm_27.TU.AmTr_v1.0_scaffold00077.44)
 0.0 0.0 0.0 0.0 0.22 0.0 0.0 0.0 0.01 0.04 0.15 0.0 0.05 0.0 0.02 0.35 0.06 0.0 0.0 0.0 0.2 0.24
AMTR_s00079p00179880 (evm_27.TU.AmTr_v1.0_scaffold00079.98)
 2.26 1.0 0.0 0.0 0.16 0.0 0.01 0.0 0.02 0.02 0.99 0.0 0.61 0.03 0.41 0.09 0.06 0.0 0.0 0.06 0.0 0.07
AMTR_s00082p00137310 (evm_27.TU.AmTr_v1.0_scaffold00082.34)
 0.0 0.0 0.0 0.0 0.22 0.0 0.0 0.0 0.0 0.0 2.55 0.0 0.34 0.0 0.0 0.0 0.0 0.0 0.0 0.15 0.0 0.0
AMTR_s00088p00157600 (evm_27.TU.AmTr_v1.0_scaffold00088.127)
 0.0 0.0 0.0 0.0 0.15 0.0 0.0 0.0 0.0 0.0 0.18 0.0 0.07 0.0 0.03 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00102p00083150 (evm_27.TU.AmTr_v1.0_scaffold00102.39)
 0.0 0.0 0.0 0.0 0.35 0.0 0.0 0.0 0.0 0.0 0.32 0.0 0.13 0.13 0.03 0.72 0.27 0.93 0.0 0.0 0.0 0.51
AMTR_s00102p00140910 (evm_27.TU.AmTr_v1.0_scaffold00102.74)
 0.0 0.0 0.0 0.0 0.08 0.0 0.0 0.0 0.0 0.0 0.1 0.0 0.01 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00121p00041090 (evm_27.TU.AmTr_v1.0_scaffold00121.7)
 0.0 0.0 0.0 0.0 0.23 0.0 0.02 0.0 0.06 0.02 0.18 0.0 0.09 0.04 0.02 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00124p00094090 (evm_27.TU.AmTr_v1.0_scaffold00124.17)
 0.0 0.0 0.0 0.0 0.24 0.0 0.0 0.0 0.01 0.0 0.22 0.0 0.18 0.0 0.2 0.0 0.06 0.0 0.0 0.0 0.0 0.0
AMTR_s00144p00026340 (evm_27.TU.AmTr_v1.0_scaffold00144.5)
 19.23 0.0 0.0 0.0 0.94 0.0 0.25 0.0 1.94 1.45 11.95 8.7 9.57 3.79 2.12 3.53 0.44 9.14 9.9 1.18 9.57 0.17
AMTR_s00148p00103230 (evm_27.TU.AmTr_v1.0_scaffold00148.73)
 0.0 0.0 0.0 0.15 1.03 0.0 0.0 0.0 0.0 0.0 1.15 0.0 0.18 0.0 0.19 1.62 0.2 0.7 0.35 0.0 1.25 0.1
AMTR_s00153p00016460 (evm_27.TU.AmTr_v1.0_scaffold00153.3)
 0.0 0.0 0.0 0.0 0.65 0.0 0.0 0.0 0.0 0.0 0.62 0.0 0.0 0.0 0.03 0.0 0.47 0.0 0.0 0.0 0.0 0.0
AMTR_s00205p00023380 (evm_27.TU.AmTr_v1.0_scaffold00205.2)
 0.0 0.0 0.0 0.0 0.12 0.0 0.0 0.0 0.0 0.0 0.53 0.0 0.13 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00345p00012140 (evm_27.TU.AmTr_v1.0_scaffold00345.1)
 0.0 0.0 0.0 0.0 0.11 0.0 0.0 0.0 0.0 0.0 2.47 0.0 1.53 0.0 0.21 0.0 0.0 0.0 0.0 0.0 0.0 1.18
AMTR_s00790p00010560 (evm_27.TU.AmTr_v1.0_scaffold00790.1)
 0.0 0.0 0.0 0.0 0.4 0.26 0.0 0.0 0.01 0.0 0.17 0.0 0.0 0.01 0.02 0.0 0.04 0.0 0.0 0.0 0.0 0.0
0.0 0.0 0.0 0.0 0.47 0.0 0.0 0.0 0.06 0.05 0.13 0.44 0.06 0.0 0.09 0.0 0.0 0.0 0.2 0.0 0.0 0.03
AMTR_s05267p00002500 (evm_27.TU.AmTr_v1.0_scaffold05267.1)
 0.0 0.0 0.0 1.54 0.36 0.0 0.0 0.0 0.0 0.0 3.45 0.0 1.93 0.8 0.67 0.0 2.62 0.0 0.0 0.19 0.0 0.0
0.0 0.0 0.0 0.07 0.08 0.0 0.0 0.0 0.02 0.02 0.43 0.0 0.03 0.04 0.04 0.34 0.06 0.0 0.22 0.06 0.48 0.06

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)