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Heatmap: Cluster_145 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
0.0 0.04 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.04 0.0 0.09 0.0 0.0 0.25 0.09 0.0 1.71 0.55 0.0 0.0 0.0 0.12 0.0 0.0 0.0 0.0 0.04 0.09 0.0 0.0
11.23 13.33 13.8 14.16 15.33 15.25 14.43 13.97 15.0 13.1 11.16 11.42 18.22 14.03 28.24 21.49 10.17 6.74 22.15 22.69 5.92 2.19 12.41 13.18 11.86 21.84 15.83 19.3 11.1 11.65 5.74 6.11
0.06 0.19 0.15 0.16 0.08 0.17 0.15 0.07 0.12 0.29 0.1 0.12 0.01 0.02 0.06 0.02 0.06 0.38 5.82 1.1 0.03 0.12 0.11 0.04 0.02 0.18 0.17 0.19 0.1 0.12 0.03 0.04
20.86 21.59 21.25 23.94 25.53 24.21 24.91 27.98 25.68 25.48 24.21 24.06 25.23 29.03 50.73 32.12 17.99 9.87 27.48 29.62 17.54 19.21 23.79 26.98 38.46 45.32 27.53 34.05 19.92 21.18 13.1 11.39
50.87 47.25 41.43 46.47 49.79 52.85 59.79 70.36 55.73 54.51 53.3 48.67 64.16 71.07 125.57 64.17 50.57 45.67 77.08 84.52 34.71 69.38 54.28 58.95 34.74 50.97 46.52 44.15 57.05 53.2 84.15 83.08
24.23 24.09 23.58 23.95 26.87 26.41 23.98 28.18 24.0 23.83 26.9 20.62 27.62 31.84 30.64 33.83 15.8 11.63 29.5 12.41 5.3 26.59 20.74 24.21 40.03 29.02 28.55 25.42 16.7 17.42 22.0 21.91
9.47 13.88 8.97 7.98 9.68 7.97 8.7 8.58 7.69 5.01 5.67 9.16 0.67 2.23 15.73 6.46 7.01 7.21 9.89 1.46 8.44 5.72 6.28 5.68 24.85 4.6 21.58 23.53 8.2 7.39 6.43 4.32
11.68 13.19 11.52 15.71 16.1 13.25 16.63 18.18 20.79 20.53 21.51 18.35 24.08 28.65 38.63 18.99 12.8 11.28 13.2 22.79 9.46 15.31 8.65 7.01 8.97 5.96 10.45 8.69 11.05 10.92 8.17 11.19
18.87 16.99 17.75 20.7 22.14 20.71 20.84 20.98 24.03 23.99 23.84 21.18 26.16 30.23 50.91 31.29 19.49 14.29 30.48 24.7 10.87 17.8 21.05 23.89 14.85 32.22 15.18 14.49 18.77 21.35 12.55 13.1
18.17 18.95 14.72 19.11 18.37 18.43 14.02 21.34 20.26 19.35 16.89 20.86 19.75 24.29 41.71 26.83 11.61 9.31 21.57 16.87 24.4 23.33 14.32 18.23 28.72 15.37 9.46 6.49 13.42 12.29 6.6 7.5
43.3 39.01 43.95 49.36 52.03 51.31 54.84 64.3 57.37 57.51 52.86 50.08 48.04 66.45 117.96 47.67 31.72 23.77 49.44 56.32 30.8 49.08 39.37 50.31 50.13 123.48 82.11 76.53 34.98 37.69 31.64 31.25
4.43 4.31 4.67 5.54 6.89 6.26 6.48 5.74 6.01 7.13 4.83 4.67 7.09 10.41 17.95 7.96 8.05 7.08 9.72 9.36 0.76 0.29 6.77 5.72 2.42 5.53 5.3 3.91 7.44 7.66 3.45 3.74
61.97 46.02 43.19 47.42 42.71 52.8 43.01 51.8 42.44 48.41 43.75 48.62 41.46 50.22 71.0 47.34 32.46 23.16 44.8 43.45 39.25 46.49 38.07 41.09 71.24 35.98 38.78 37.35 34.4 34.59 33.44 34.76
0.16 0.31 0.38 0.17 0.09 0.17 0.08 0.32 0.16 0.25 0.2 0.28 0.66 0.72 0.02 0.45 0.07 0.16 2.38 0.58 0.33 0.0 0.04 0.07 0.11 0.87 1.0 0.75 0.16 0.07 0.05 0.04
0.0 0.83 0.69 0.0 0.0 1.72 1.72 0.7 0.0 0.7 0.0 0.0 2.66 1.06 1.14 2.84 5.72 2.73 32.74 19.26 9.1 8.4 1.3 5.41 6.52 0.0 7.09 0.0 5.99 5.73 3.1 1.97
4.25 5.45 6.16 5.5 6.33 5.16 5.69 6.56 6.08 4.5 4.49 5.23 8.64 7.54 15.71 10.22 3.81 4.22 10.42 5.86 1.34 2.3 4.58 5.24 7.63 7.96 6.51 9.09 4.96 4.93 2.24 2.43
1.26 1.41 1.32 1.54 2.24 1.8 2.59 2.7 2.13 1.4 1.86 1.24 3.97 2.14 5.64 4.58 1.55 0.97 5.64 0.56 1.47 3.79 1.55 2.3 3.02 3.75 4.73 4.48 1.66 2.13 1.14 1.98
0.04 0.0 0.0 0.03 0.07 0.0 0.0 0.03 0.08 0.0 0.0 0.0 0.04 0.0 0.2 0.08 0.07 0.05 0.34 0.36 0.17 0.31 0.03 0.0 0.0 0.0 0.0 0.16 0.07 0.0 0.0 0.0
118.59 86.09 91.86 108.99 117.36 121.86 129.73 186.06 206.06 213.54 227.71 190.31 221.01 197.35 451.32 232.73 121.23 118.79 144.53 204.3 69.8 228.66 104.19 124.27 85.05 130.31 78.17 76.7 185.59 189.72 161.82 162.59
3.98 5.8 5.58 5.93 5.04 8.09 4.82 5.78 6.64 5.64 8.08 5.1 8.44 9.77 20.44 11.6 5.98 4.46 6.6 3.38 1.72 0.58 7.06 6.26 2.48 7.68 3.13 3.88 6.13 6.5 2.66 4.22
1.58 1.79 6.51 2.35 0.3 5.01 3.36 0.91 1.44 3.37 3.73 2.89 10.75 2.35 2.55 9.91 9.2 13.15 24.52 24.82 0.0 10.57 12.34 7.93 8.1 12.23 2.13 6.83 10.67 11.73 7.99 7.04
4.01 3.51 3.22 3.85 6.66 4.9 5.9 6.62 5.03 3.97 4.02 3.45 5.72 4.74 11.34 6.08 3.09 3.32 12.29 3.85 2.13 5.61 4.03 5.25 5.02 8.57 8.84 8.77 3.26 3.77 2.93 2.88
0.08 0.0 0.0 0.0 0.0 0.0 0.07 0.08 0.0 0.05 0.28 0.0 0.0 0.0 0.0 0.06 0.05 0.0 2.59 1.18 0.51 0.0 0.05 0.44 0.74 1.02 0.13 0.0 0.1 0.31 0.35 0.24
2.15 2.68 2.28 2.21 2.28 2.15 1.76 1.45 1.91 1.69 0.86 1.73 0.28 0.3 0.33 0.31 1.27 0.15 8.44 5.7 0.44 7.18 0.72 1.01 1.87 3.49 8.58 9.12 1.18 1.48 0.32 0.87
8.96 8.76 5.91 10.17 2.52 15.87 10.58 16.13 10.26 8.74 10.46 9.66 20.26 6.12 8.72 30.27 23.96 20.43 223.21 77.15 46.19 53.26 22.95 26.21 63.0 24.61 23.34 22.52 27.04 24.82 14.93 13.88
13.9 16.23 16.65 18.51 19.97 19.17 20.4 19.7 19.19 13.56 13.38 12.55 21.6 20.72 38.03 16.0 9.23 3.06 10.46 13.88 6.17 3.34 10.68 11.36 24.57 12.3 19.19 18.41 8.87 9.89 12.43 13.19
3.12 3.11 6.82 3.92 3.92 4.24 3.73 4.31 4.12 4.62 3.32 3.73 3.69 3.34 9.23 4.22 2.9 3.23 5.45 8.83 5.47 8.79 3.09 3.36 2.23 5.15 3.97 3.26 4.49 4.06 1.39 1.65
0.0 0.0 0.0 0.0 0.0 0.0 0.09 0.0 0.0 0.0 0.0 0.0 0.09 0.0 0.11 0.0 0.19 0.04 1.25 0.4 0.0 0.0 0.0 0.02 0.0 0.0 0.0 0.0 0.0 0.0 0.07 0.0
0.1 0.12 0.02 0.02 0.0 0.05 0.13 0.02 0.03 0.07 0.07 0.05 0.37 0.29 0.35 0.6 0.06 0.47 4.57 0.87 0.0 0.25 0.03 0.0 0.0 0.12 0.06 0.13 0.08 0.14 0.17 0.13
0.01 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.04 0.02 0.1 0.02 0.36 0.14 0.18 0.09 0.01 0.01 1.11 0.74 0.0 0.04 0.03 0.0 0.0 0.06 0.0 0.0 0.01 0.03 0.01 0.04
0.13 0.04 0.0 0.04 0.04 0.05 0.08 0.02 0.0 0.0 0.05 0.04 0.18 0.12 0.36 0.13 0.02 0.07 0.27 0.0 0.0 0.0 0.0 0.0 0.0 0.1 0.51 0.54 0.02 0.0 0.0 0.02
0.33 0.27 0.23 0.48 0.4 0.37 0.07 0.3 0.07 0.36 0.0 0.41 0.08 0.2 0.54 0.16 0.37 0.1 1.55 0.64 0.0 0.0 0.51 0.44 0.0 1.57 1.35 1.08 0.49 0.22 0.07 0.41
0.79 0.73 1.23 1.35 0.9 1.35 1.03 0.61 1.48 0.3 0.81 0.45 1.95 2.47 4.43 2.59 0.2 0.15 3.94 2.71 0.37 0.0 0.36 0.22 0.66 1.56 1.54 2.43 0.24 0.3 0.17 0.13
8.75 8.81 9.31 9.79 6.3 9.78 7.78 7.09 7.11 6.33 7.46 7.19 2.92 2.98 13.84 5.0 3.9 1.26 6.78 4.74 3.03 3.44 4.23 2.74 14.42 9.9 11.36 13.98 3.34 3.38 2.9 2.26
6.64 5.58 5.65 7.04 9.71 7.49 7.63 9.01 8.5 7.21 7.84 6.89 6.94 4.45 13.29 9.06 5.35 2.59 9.35 7.08 1.63 1.96 6.86 7.36 3.96 15.55 12.13 10.07 6.13 6.52 4.5 4.88
9.3 12.04 10.65 12.81 11.86 14.75 13.37 16.65 13.32 11.06 11.59 8.13 11.9 18.36 46.43 16.19 8.54 5.57 15.11 25.66 6.64 10.75 10.19 10.92 19.79 38.01 27.83 28.02 7.82 9.04 5.65 6.94
3.65 3.02 3.18 3.32 3.41 3.81 4.0 4.4 4.84 4.95 4.01 3.88 4.64 4.46 3.55 5.51 2.66 2.83 6.38 6.36 1.44 2.18 3.61 3.53 2.59 6.44 6.17 5.74 3.4 3.76 4.11 4.01
0.49 0.38 0.82 0.56 0.66 0.59 0.59 0.58 0.47 0.68 0.58 0.41 2.29 0.64 1.36 2.06 0.57 0.87 6.27 2.91 0.23 0.66 1.33 2.07 1.68 1.18 1.35 1.12 0.85 0.79 0.61 0.61
4.03 5.13 3.05 5.07 4.13 5.09 3.66 4.07 3.92 3.86 3.32 4.16 4.84 5.4 8.53 4.28 3.0 0.5 3.7 3.02 1.42 2.21 3.41 3.68 7.74 3.02 4.61 4.27 2.81 2.73 1.56 1.86
2.71 2.92 2.78 3.54 3.84 3.2 2.58 3.01 1.78 3.16 2.91 2.18 2.49 5.61 5.01 2.69 1.41 0.38 4.64 0.81 2.37 1.42 3.12 2.84 7.69 1.87 3.08 2.99 1.77 1.7 1.38 1.69
0.02 0.06 0.1 0.0 0.0 0.06 0.06 0.0 0.0 0.0 0.0 0.06 0.07 0.0 0.15 0.21 0.32 0.71 6.74 4.04 0.0 0.39 0.26 0.38 0.0 0.83 0.54 0.32 0.32 0.58 0.25 0.06
0.25 0.2 0.1 0.29 0.07 0.25 0.17 0.55 0.22 0.32 0.17 0.38 2.28 6.7 4.07 2.83 0.29 0.33 6.83 3.4 0.16 4.21 0.24 0.28 1.28 1.2 1.31 1.2 0.35 0.48 0.11 0.3
0.03 0.0 0.0 0.0 0.0 0.0 0.0 0.06 0.0 0.03 0.0 0.0 0.12 0.04 0.15 0.04 0.0 0.1 0.59 0.08 0.18 0.0 0.07 0.04 0.0 0.0 0.0 0.0 0.04 0.0 0.0 0.03
0.06 0.1 0.0 0.02 0.0 0.0 0.02 0.15 0.02 0.1 0.27 0.03 0.14 0.08 0.37 0.14 0.0 0.1 2.3 0.29 0.0 0.0 0.0 0.02 0.0 0.19 0.14 0.0 0.02 0.02 0.07 0.07
4.01 2.4 3.92 2.55 5.02 5.54 3.93 4.13 3.56 3.37 3.59 3.06 6.84 5.6 2.7 5.47 2.7 1.62 10.71 12.94 4.8 7.72 2.84 3.19 3.36 2.03 1.14 1.61 2.78 3.15 1.3 1.55
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.24 0.32 0.0 0.0 0.0 0.0 0.0 0.33 0.0 0.0 0.0 0.13 0.13 0.0
1.04 1.09 1.18 1.15 0.95 1.82 1.85 1.57 1.05 0.82 0.71 0.79 0.51 1.42 4.09 0.81 0.92 1.38 8.21 3.45 2.8 0.19 1.7 1.28 1.89 0.94 1.87 1.34 0.93 1.14 0.51 0.51
1.07 1.17 1.24 1.18 1.21 1.22 1.43 0.85 1.16 0.87 1.14 0.78 1.68 2.94 3.11 1.7 0.93 0.68 5.2 2.25 0.42 0.14 0.78 0.45 0.6 2.25 2.08 2.53 0.6 0.81 0.24 0.32
0.25 0.17 0.51 0.27 0.32 0.35 0.31 0.27 0.26 0.42 0.26 0.34 0.03 0.06 0.83 0.12 0.22 0.22 5.91 2.63 0.0 0.0 0.1 0.05 0.48 0.77 0.13 0.12 0.15 0.13 0.05 0.07
3.96 3.5 4.77 3.88 3.99 4.79 5.26 4.98 3.63 4.85 5.4 4.15 5.02 3.42 4.05 6.09 5.94 3.39 6.68 9.2 2.12 5.56 6.36 5.61 7.17 12.89 10.37 12.72 5.97 6.42 5.9 5.04
0.03 0.0 0.06 0.13 0.0 0.03 0.16 0.08 0.12 0.03 0.09 0.03 0.04 0.11 0.4 0.03 0.13 0.14 4.24 0.71 0.0 0.0 0.05 0.05 0.0 0.06 0.98 0.58 0.12 0.12 0.06 0.0
0.06 0.13 0.22 0.18 0.12 0.2 0.13 0.15 0.03 0.15 0.11 0.03 0.13 0.42 1.02 0.0 0.03 0.1 0.77 0.69 0.05 0.77 0.06 0.02 0.0 0.04 0.16 0.09 0.0 0.06 0.07 0.07
0.01 0.0 0.0 0.03 0.0 0.03 0.0 0.0 0.0 0.0 0.0 0.0 0.11 0.07 0.01 0.21 0.05 0.06 0.81 0.69 0.6 0.44 0.02 0.07 0.44 0.05 0.3 0.34 0.02 0.2 0.12 0.09
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.03 0.07 0.0 0.0 0.0 0.15 0.2 0.51 0.41 0.0 0.09 0.09 0.15 0.0 0.0 0.0 0.0 0.03 0.18 0.12 0.06
0.02 0.02 0.01 0.07 0.14 0.07 0.02 0.01 0.0 0.05 0.0 0.03 0.01 0.29 0.28 0.1 0.0 0.01 0.27 0.23 0.03 0.0 0.05 0.02 0.09 0.12 0.09 0.16 0.0 0.0 0.0 0.0
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.08 0.0 0.0 0.0 0.0 0.0 0.0 0.17 0.0 0.0 0.0 0.0 0.0 0.18 0.0 0.0 0.0 0.0 0.08 0.0
0.16 0.12 0.21 0.13 0.07 0.07 0.17 0.18 0.29 0.11 0.2 0.2 0.09 0.14 0.77 0.19 0.12 0.05 0.12 0.65 0.04 0.0 0.03 0.01 0.11 0.1 0.07 0.19 0.0 0.04 0.03 0.05
9.51 10.44 8.9 14.74 16.34 15.36 12.9 11.43 14.67 8.86 10.88 9.13 12.41 13.62 14.97 16.36 16.72 9.93 24.33 31.33 7.12 13.5 13.88 14.31 10.31 31.73 37.42 40.49 13.9 14.69 8.77 8.78
0.35 0.34 0.2 0.41 0.37 0.63 0.23 0.21 0.14 0.32 0.06 0.1 0.59 0.98 1.57 0.52 0.21 0.19 1.88 0.58 0.0 0.0 0.19 0.07 0.43 0.17 1.56 1.87 0.24 0.18 0.07 0.14
19.42 18.81 17.6 17.15 15.48 17.44 17.26 18.96 22.5 20.79 19.13 18.57 17.43 11.98 38.16 22.89 13.75 6.54 13.63 13.85 17.07 12.01 9.82 10.95 21.11 16.12 13.7 12.58 11.72 14.13 9.71 9.92
12.94 10.99 10.83 11.14 11.9 12.87 11.24 14.57 13.25 12.64 14.78 11.51 14.36 12.38 11.07 17.7 11.29 11.19 17.6 13.96 5.95 5.11 12.01 11.49 12.03 24.17 18.77 16.26 12.49 12.69 9.94 8.95
6.02 6.98 4.88 5.94 6.09 6.41 5.27 7.25 5.5 6.35 5.38 5.1 9.06 7.29 10.71 9.56 4.45 4.99 8.73 9.69 3.11 5.55 4.54 5.21 4.11 7.85 6.58 8.14 4.91 4.71 5.34 4.64
25.29 32.91 34.44 41.72 37.5 42.01 37.25 38.94 33.32 32.26 28.42 28.87 21.59 20.6 29.29 26.91 37.98 21.02 34.39 34.74 20.29 22.44 35.12 33.1 44.41 67.96 55.3 66.46 36.34 34.9 46.72 29.82
2.67 2.64 3.03 2.73 2.49 5.15 4.05 3.72 3.82 4.55 2.86 3.23 2.02 1.54 9.7 2.71 2.45 2.09 2.5 5.56 1.44 1.97 1.82 1.87 3.5 2.42 3.37 4.27 2.16 2.41 1.95 1.76
12.71 12.07 13.52 15.7 15.47 15.52 16.21 20.26 18.08 17.62 16.75 15.01 7.85 6.65 25.23 7.15 8.05 1.73 8.91 17.41 2.81 6.0 7.01 7.17 19.09 24.63 26.78 29.48 7.92 9.55 5.95 4.61
8.97 9.51 7.86 8.15 9.89 10.37 8.33 6.81 7.69 6.56 6.21 6.42 4.16 2.45 9.06 4.21 6.22 6.69 6.7 5.1 2.56 5.15 5.6 5.76 15.25 7.94 12.31 15.17 5.32 5.94 4.29 4.88
15.22 12.45 14.19 13.28 13.37 12.02 10.15 11.88 14.2 14.02 13.95 11.93 12.54 18.31 32.0 19.62 8.37 6.76 13.43 18.15 6.83 11.38 10.68 14.26 8.65 11.16 11.44 12.33 8.37 9.71 6.95 5.66
30.87 24.86 21.96 25.14 31.23 24.68 29.62 36.79 39.63 38.7 33.42 33.71 20.5 25.64 47.99 33.54 15.13 12.85 28.0 36.72 12.85 35.23 19.14 21.54 27.16 74.32 40.64 38.2 19.48 21.09 16.32 17.52
5.18 4.92 5.37 7.51 8.74 9.76 10.68 10.47 9.45 10.12 8.01 6.34 4.39 5.75 23.11 5.02 2.75 0.61 3.77 7.14 8.27 10.36 3.71 5.09 10.99 7.75 10.82 10.16 2.96 3.89 3.26 3.47
18.24 19.35 20.0 23.25 21.29 24.42 17.32 22.33 20.16 20.36 19.68 20.0 20.23 30.18 26.01 21.83 13.99 4.31 21.57 10.54 6.46 14.42 16.76 20.75 42.2 22.08 23.0 19.95 18.35 20.07 14.75 17.52
4.67 4.55 4.5 5.17 5.17 6.21 3.19 4.68 5.33 4.63 5.21 3.86 4.65 1.74 13.98 4.81 3.53 1.85 2.88 7.4 0.77 0.25 3.04 3.8 1.46 3.98 4.97 4.19 3.23 4.01 2.42 2.6
0.42 0.27 0.43 0.33 0.93 0.91 1.4 1.13 1.06 1.24 0.8 0.76 0.39 0.55 0.48 0.88 0.51 0.47 5.38 2.39 0.18 1.21 0.29 0.47 0.76 1.33 1.76 2.56 0.79 1.06 0.34 0.37
11.35 12.6 11.65 13.61 15.62 14.09 17.14 17.55 17.4 16.19 14.73 14.15 11.0 14.19 20.84 12.67 8.95 8.32 26.96 30.56 5.44 11.0 9.9 8.67 9.87 18.13 29.66 30.9 8.19 9.21 8.63 9.36
41.86 41.09 35.81 43.78 41.19 36.94 36.42 40.06 37.49 34.77 34.53 39.01 44.19 47.94 73.79 52.32 33.95 24.21 51.45 18.59 24.75 15.17 38.75 44.97 56.55 83.32 52.3 48.78 36.55 37.5 21.86 17.46
24.08 23.47 23.0 27.13 31.07 31.55 25.17 31.91 29.84 28.99 25.84 22.81 36.06 31.58 68.68 33.58 18.41 15.94 34.39 31.95 35.48 26.3 24.34 31.58 47.98 53.52 43.58 49.18 19.97 23.77 12.01 10.96

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)