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Heatmap: Cluster_21 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
0.08 0.01 0.0 0.0 0.0 0.09 0.07 0.25 0.09 0.0 0.03 0.25 0.03 0.37 0.33 0.17 0.02 0.11 0.0 0.0 0.0 0.0 0.03 0.03 0.08 0.63 0.0 0.0 0.0 0.0 0.06 0.0
0.91 0.94 0.8 0.19 0.14 1.28 3.25 1.35 1.22 0.7 1.22 1.31 2.64 47.42 7.84 8.2 1.7 3.43 1.67 0.41 0.0 0.0 4.87 6.78 3.58 0.1 0.64 0.8 1.46 1.53 1.16 0.45
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.11 0.0 0.0 0.0 0.0 0.11 0.0 0.0 0.0 0.0 0.05 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
8.54 10.94 1.66 3.57 4.96 6.65 2.39 15.94 4.31 7.4 8.56 7.66 143.96 1270.9 116.36 181.2 0.3 0.67 3.16 0.0 0.0 0.0 0.73 5.29 30.09 22.32 26.86 3.63 2.02 2.07 2.31 0.85
10.0 8.3 5.75 7.71 7.23 6.8 7.63 10.74 10.21 10.6 10.91 11.68 4.62 181.23 4.16 18.5 10.52 5.14 4.75 36.25 45.72 10.26 6.83 5.12 62.07 7.09 6.68 4.56 10.39 10.53 6.01 3.96
2.02 2.0 0.05 0.3 0.43 1.45 0.1 1.38 0.55 0.76 1.22 0.89 3.79 51.27 0.31 10.73 0.16 0.0 2.82 0.0 0.0 0.0 1.94 4.8 11.76 6.98 2.61 0.13 0.46 0.42 2.55 0.24
0.19 0.0 0.02 0.12 0.12 1.31 0.08 1.22 0.0 0.28 1.05 0.31 0.28 3.55 0.05 0.3 0.0 0.02 0.26 0.0 0.0 0.0 0.39 0.32 1.52 1.98 0.31 0.0 0.29 0.1 0.3 0.05
2.42 2.48 0.2 0.52 1.47 0.94 0.5 1.83 0.13 0.68 1.36 1.13 1.87 55.19 2.08 5.62 1.49 1.9 4.15 0.0 0.0 0.0 2.86 1.62 6.02 2.06 2.55 0.0 4.71 1.92 10.93 1.19
19.48 14.45 18.42 12.99 12.91 15.14 6.17 20.36 12.39 16.69 20.05 6.82 128.07 482.07 16.7 73.03 3.27 111.33 45.16 0.0 0.6 0.0 6.89 23.94 6.06 17.32 18.99 2.67 5.22 10.58 7.54 5.04
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.2 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
0.0 0.06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.06 0.0 0.0 0.0 0.16 0.05 0.0 0.0 0.07 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.15 0.0 0.0 0.0 0.0 0.0
2.28 0.61 4.67 0.64 1.15 0.8 1.25 2.15 2.46 1.73 0.5 2.01 0.13 24.27 0.34 2.34 0.14 0.28 1.96 0.0 0.0 0.0 0.26 0.39 0.34 4.41 1.79 0.0 0.81 0.25 0.53 0.09
34.01 20.45 16.05 14.97 21.03 14.75 15.82 23.5 13.53 18.22 17.02 17.71 49.02 284.83 45.85 84.74 9.75 0.0 52.09 0.05 7.89 0.21 42.7 64.99 27.77 62.89 38.16 23.79 26.65 21.54 38.69 11.33
1.5 1.19 0.68 0.96 0.22 0.51 0.43 1.25 0.41 1.05 1.66 0.36 0.31 17.23 0.58 6.12 0.15 0.91 2.99 0.0 0.0 0.0 0.57 0.51 1.74 8.33 1.66 1.38 1.61 0.37 1.98 0.31
29.65 25.95 26.85 23.4 29.14 26.27 24.6 25.59 28.03 28.49 31.4 30.63 13.42 203.51 10.17 37.34 25.08 17.01 28.49 4.77 0.59 2.38 18.18 15.55 4.27 63.38 37.85 42.78 25.78 25.05 28.83 27.03
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.08 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
0.29 0.53 0.57 0.23 0.38 0.17 0.38 0.25 0.33 0.04 0.25 0.39 0.16 14.32 0.07 1.43 0.29 0.08 1.4 0.0 0.0 0.0 0.03 0.25 0.76 0.0 0.85 0.52 0.25 0.45 0.25 0.14
0.38 0.18 0.34 0.0 0.11 0.41 0.33 0.37 0.18 0.48 0.14 0.2 0.26 3.1 0.06 0.24 0.15 0.0 0.17 0.02 0.0 0.1 0.09 0.16 0.0 0.41 0.16 0.44 0.23 0.16 0.27 0.04
2.96 2.43 1.84 0.9 8.12 2.99 4.58 4.52 5.62 1.65 4.22 2.41 8.16 55.15 1.73 14.11 1.98 15.28 7.64 0.0 0.0 0.0 2.47 3.34 2.27 5.46 6.41 3.81 7.43 4.66 6.25 2.53
4.22 2.67 2.04 2.73 3.42 2.44 4.21 5.31 2.74 5.3 4.46 3.65 1.13 31.48 7.89 6.88 2.06 0.45 11.47 1.87 2.33 0.33 1.85 3.27 1.04 4.76 6.06 5.6 4.05 4.26 11.26 7.29
3.74 4.59 5.16 6.77 7.81 5.91 6.33 9.02 7.43 6.47 5.9 4.56 9.43 121.37 14.14 13.65 2.0 1.9 5.7 2.38 8.74 0.99 3.46 4.78 15.38 11.36 10.56 11.19 4.6 4.43 4.12 2.84
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.19 0.0 0.0 0.0 0.07 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
0.45 0.57 0.2 0.5 1.07 0.38 0.8 0.43 0.55 0.28 0.6 0.37 0.29 22.09 3.67 0.18 0.0 0.06 0.07 0.11 0.0 0.0 0.04 0.04 1.74 1.0 1.06 0.8 0.04 0.04 0.0 0.0
0.36 0.26 0.48 0.53 0.46 0.3 0.53 0.57 0.47 0.47 0.54 0.62 1.49 2.66 0.33 1.65 0.86 0.59 1.69 0.0 0.0 0.67 0.91 1.12 0.17 0.31 0.31 0.81 0.84 1.0 1.05 0.84
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.25 0.16 0.47 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.17 0.0 0.0 0.0 0.0 0.0 0.0
0.12 0.02 0.03 0.09 0.36 0.06 0.07 0.2 0.08 0.03 0.06 0.08 0.24 3.21 0.59 0.66 0.0 0.0 0.03 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01 0.0
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.08 0.0 0.0 0.0 0.29 0.08 0.0 0.0 0.0 0.14 0.04 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.09 0.06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
0.8 0.91 1.14 1.5 1.42 0.43 0.9 0.92 0.86 0.66 0.88 0.53 1.91 24.28 1.02 0.7 0.0 0.0 0.09 0.05 0.12 0.0 0.0 0.0 1.34 1.39 0.87 0.23 0.05 0.05 0.0 0.04
0.02 0.04 0.0 0.0 0.0 0.0 0.0 0.11 0.12 0.07 0.0 0.0 0.0 0.49 0.59 0.0 0.1 0.07 0.09 0.0 0.0 0.26 0.0 0.04 0.32 0.46 0.24 0.21 0.05 0.19 0.09 0.0
12.69 2.5 0.68 1.32 2.77 2.08 2.39 4.23 1.49 2.63 3.27 2.16 8.52 147.62 4.76 55.11 3.03 19.87 31.92 0.0 0.0 1.22 2.6 4.91 7.71 3.56 3.84 2.81 23.72 14.41 9.94 1.92
0.07 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.23 0.05 0.09 0.0 0.0 0.07 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.22 0.38 0.08 0.15 0.0 0.0
3.28 4.31 2.29 1.35 1.64 3.19 0.81 5.0 2.91 2.91 3.93 3.18 5.85 134.21 12.75 7.01 0.89 0.09 0.91 7.54 0.7 0.0 2.14 1.73 4.83 5.98 5.04 0.25 0.93 1.46 0.51 0.64
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02 0.0 0.0 0.0 0.0 0.04 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02 0.0 0.0
18.62 16.98 17.99 25.74 30.18 37.33 21.53 32.75 17.28 23.17 21.72 15.82 48.85 192.39 20.18 96.69 20.93 21.66 45.61 7.6 32.08 8.43 30.54 56.99 49.62 110.11 61.14 41.26 20.27 16.88 25.27 15.33
2.16 2.17 0.5 0.0 0.0 2.57 1.1 0.27 2.22 0.71 5.02 1.47 23.79 823.96 54.51 56.62 1.47 0.41 3.09 0.0 0.0 0.0 3.46 2.53 10.94 1.39 3.42 3.97 3.15 3.32 2.21 3.02
1.31 0.0 0.43 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.4 0.56 95.47 7.32 3.0 0.0 0.0 0.16 0.0 0.0 0.0 0.0 0.0 1.06 0.0 0.15 0.0 0.0 0.14 0.16 0.0
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.19 0.0 0.0 0.0 0.0 0.06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.05 0.04 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
2.16 2.17 0.5 0.0 0.0 2.57 1.1 0.27 2.22 0.71 5.02 1.47 23.79 823.96 54.51 56.62 1.47 0.41 3.09 0.0 0.0 0.0 3.46 2.53 10.94 1.39 3.42 3.97 3.15 3.32 2.21 3.02
44.84 31.27 19.05 14.05 15.2 11.08 10.94 11.23 15.56 16.69 18.5 31.89 35.34 437.94 20.98 38.94 11.44 14.2 16.98 0.31 0.0 0.13 6.38 10.19 68.38 33.48 12.78 7.22 16.01 15.11 12.79 11.73
4.26 2.75 2.5 2.29 2.36 2.63 2.7 2.27 2.35 3.0 2.66 2.66 2.3 25.4 5.1 7.04 0.96 1.22 2.78 0.18 0.18 0.13 0.95 1.64 1.65 3.36 3.09 3.07 1.34 1.08 1.35 0.84
1.7 1.46 1.44 1.83 0.97 1.75 1.76 1.24 1.64 1.83 1.71 1.8 2.75 12.77 1.79 3.53 1.42 1.67 1.55 3.04 1.82 0.26 2.66 2.57 2.62 3.17 1.45 1.55 1.87 1.41 1.9 1.18
0.26 0.16 0.18 0.29 0.12 0.31 0.04 0.12 0.34 0.18 0.14 0.08 0.27 1.73 0.19 0.34 0.05 0.07 0.11 0.43 0.0 0.0 0.18 0.06 0.0 0.46 0.24 0.0 0.28 0.25 0.07 0.2
0.01 0.0 0.0 0.14 0.0 0.0 0.07 0.0 0.04 0.0 0.0 0.0 0.09 0.32 0.38 0.1 0.0 0.21 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.04
0.03 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.21 0.0 0.0 0.0 0.0 0.0 0.0 0.05 0.0 0.0 0.0 0.13 0.0 0.0 0.0 0.0 0.0 0.0 0.0
8.28 7.23 2.6 2.58 3.57 3.18 1.54 4.25 3.06 2.33 5.18 4.04 18.57 122.16 4.17 28.85 1.41 0.0 14.26 0.0 0.0 0.0 12.64 24.84 15.47 30.89 23.81 4.83 3.81 3.77 6.92 1.93
1.18 1.09 0.23 0.36 0.89 0.96 0.64 1.66 0.59 0.67 0.83 0.81 1.6 16.95 0.92 4.53 0.34 0.21 3.25 0.0 0.0 0.0 1.12 1.16 1.02 3.57 2.05 0.81 0.23 0.22 1.44 0.32
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.03 0.0 0.12 0.06 0.0 0.0 0.0 0.07 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3.2 3.49 2.32 2.2 2.38 1.92 2.25 4.39 2.84 6.05 4.47 5.66 11.75 87.99 9.5 12.66 2.97 1.58 4.31 22.02 14.97 17.8 4.5 6.87 24.26 8.48 6.05 3.22 4.32 4.84 2.44 2.13
1.26 0.7 1.03 0.96 0.98 1.12 1.24 1.44 1.11 1.24 1.47 1.02 3.43 10.04 1.69 2.64 0.83 1.51 0.54 0.17 1.18 0.68 0.48 0.57 0.56 2.28 1.43 1.72 1.0 0.78 1.04 0.39
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.19 0.92 0.03 0.26 0.0 0.0 0.04 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
0.03 0.09 0.0 0.15 0.11 0.0 0.0 0.0 0.5 0.08 0.0 0.15 0.0 1.78 0.11 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.05 0.1 0.0 0.32 0.0 0.0 0.0 0.0 0.0 0.0
0.02 0.02 0.0 0.03 0.0 0.14 0.0 0.0 0.04 0.15 0.0 0.05 1.23 0.19 0.0 0.14 0.03 0.8 0.65 0.0 0.0 0.0 0.02 0.02 0.14 0.0 0.0 0.07 0.01 0.03 0.0 0.0
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.05 0.0 0.0 0.04 0.0 0.05 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02 0.0 0.02 0.0
4.56 4.3 3.78 4.0 3.04 3.38 4.04 3.61 3.88 5.26 4.53 4.15 5.51 32.89 4.55 8.22 2.22 0.97 2.54 2.21 5.31 0.17 5.55 4.43 2.09 6.06 3.37 3.49 3.75 3.19 4.3 2.3
43.75 52.26 51.85 54.4 57.05 47.68 35.2 63.7 39.86 49.21 52.09 29.79 51.56 455.14 18.02 39.01 2.63 31.22 12.75 0.0 0.0 0.0 3.86 9.44 0.0 63.43 74.25 12.49 2.77 4.34 3.7 2.56
35.6 27.22 6.07 4.56 4.87 3.97 3.81 6.27 4.35 5.96 5.45 12.53 10.24 200.95 2.77 20.01 2.85 20.58 28.14 6.82 6.35 0.0 7.74 22.76 33.82 16.87 30.12 6.89 7.41 6.25 28.76 19.87
11.79 8.01 3.95 4.52 5.29 9.88 3.75 11.63 4.72 6.94 6.7 5.73 16.31 91.32 22.72 25.16 3.62 0.0 15.56 0.0 0.25 0.0 10.69 14.32 9.12 21.68 19.33 7.56 9.15 7.3 12.43 3.52
5.23 4.24 1.46 19.4 7.45 6.74 8.59 8.01 2.6 8.62 6.8 8.43 2.16 107.3 18.33 15.87 0.21 0.16 14.65 0.0 0.0 0.0 0.91 0.28 0.49 0.0 0.0 0.0 0.31 0.1 0.51 0.1
38.0 40.16 15.66 17.7 24.32 21.42 13.69 22.67 11.53 14.39 14.0 15.17 61.22 538.14 6.02 102.69 11.28 68.27 128.81 0.24 30.36 0.0 54.29 153.7 50.0 63.9 159.52 52.62 30.34 23.24 106.05 75.01
0.31 0.37 0.06 0.26 0.35 0.7 0.31 0.97 0.18 0.37 0.43 0.48 0.77 98.54 14.66 5.09 0.36 0.4 0.31 0.0 1.06 0.7 0.17 0.42 1.32 0.41 1.15 1.29 0.56 0.7 0.38 0.62
0.35 0.34 0.21 0.3 0.17 0.31 0.41 0.77 0.16 0.51 0.21 0.65 0.68 69.74 1.21 6.77 0.0 0.03 1.02 0.0 0.0 0.0 0.06 0.03 1.2 0.12 0.16 0.0 0.11 0.23 0.12 0.0
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 1.84 0.7 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 1.64 0.0 0.0 0.0 0.0 0.0 0.0
3.15 1.36 2.08 1.89 1.69 2.56 2.16 1.07 1.91 1.81 1.71 1.17 2.0 12.14 1.16 3.28 1.02 2.25 2.0 0.68 1.92 0.11 1.5 1.71 1.31 1.6 1.97 1.36 1.25 1.89 0.42 0.92
8.39 7.12 5.38 4.26 6.45 4.97 5.82 3.77 5.97 6.13 5.71 6.36 9.12 28.73 6.69 19.89 10.92 12.91 10.09 0.14 1.67 0.38 9.14 13.27 7.5 3.14 3.02 1.77 11.65 7.8 9.97 5.83
109.02 82.91 81.59 94.4 89.32 101.93 103.34 147.26 116.49 127.49 128.13 115.59 267.05 588.03 258.95 201.53 58.11 61.62 100.87 16.08 24.61 33.0 92.49 122.62 95.62 282.84 136.23 109.39 124.46 110.92 225.15 176.72
1.41 0.87 0.23 0.6 1.17 0.68 0.33 0.98 0.67 1.44 0.94 0.99 2.58 89.38 0.61 8.48 0.52 0.85 19.67 0.0 0.0 0.16 0.55 0.59 2.68 5.18 1.37 0.34 2.06 1.2 1.45 0.53
0.18 0.23 0.12 0.16 0.34 0.19 0.18 0.32 0.4 0.18 0.15 0.09 1.76 5.45 1.2 1.38 0.0 0.02 0.58 0.0 0.0 0.04 0.0 0.07 0.0 0.06 0.1 0.07 0.04 0.1 0.01 0.08

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)