- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Aerial tissue - Light - ZT1 | Aerial tissue - Light - ZT3 | Aerial tissue - Light - ZT5 | Aerial tissue - Light - ZT7 | Aerial tissue - Light - ZT9 | Aerial tissue - Light - ZT11 | Aerial tissue - Dark - ZT1 | Aerial tissue - Dark - ZT3 | Aerial tissue - Dark - ZT5 | Aerial tissue - Dark - ZT7 | Aerial tissue - Dark - ZT9 | Aerial tissue - Dark - ZT11 | Roots | Root elongation and differentiation zone | Root meristematic zone | Aerial roots and rhizophores | Shoot tips | Microphyll | Strobili | Shoot apical meristem - AC | Shoot apical meristem - Core | Shoot apical meristem - P1 | Stem - Top | Stem - Bottom | Whole plant | Aerial tissue - Stress - Dark | Aerial tissue - Stress - High light | Aerial tissue - Stress - Cont | Aerial tissue - Stress - 37C 1h | Aerial tissue - Stress - 37C 3h | Aerial tissue - Stress - 4C 1h | Aerial tissue - Stress - 4C 3h |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| -0.35 | -0.83 | -1.36 | -0.89 | -1.18 | -1.06 | -1.37 | -0.97 | -0.68 | -0.55 | -0.56 | -0.77 | 0.44 | 0.04 | -1.13 | 1.03 | -0.65 | -0.69 | 3.51 | - | - | - | -0.06 | -0.24 | -2.38 | -0.1 | -0.59 | -0.6 | 0.07 | -0.21 | -0.46 | -0.18 | |
| -0.5 | -1.05 | -1.07 | -0.75 | -0.92 | -1.07 | -1.23 | -0.9 | -1.11 | -0.47 | -0.37 | -0.79 | 0.88 | -0.04 | -0.56 | 1.01 | -1.17 | -2.15 | 3.71 | -5.18 | -5.93 | - | -0.16 | -0.15 | -1.98 | 0.2 | -0.9 | -1.23 | -0.79 | -0.84 | -2.01 | -1.41 | |
| -1.77 | -2.28 | -2.38 | -2.61 | -0.94 | -2.35 | -1.59 | -1.12 | -2.38 | -1.83 | -2.35 | -2.1 | 0.9 | 0.21 | -2.14 | 1.64 | -2.46 | -1.16 | 3.8 | - | -6.71 | - | 0.17 | 1.06 | -2.01 | -1.01 | -1.82 | -1.12 | -0.17 | 0.06 | -0.84 | -0.84 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.