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Heatmap: Cluster_99 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
2.95 1.36 1.14 1.27 2.27 1.97 1.35 3.71 2.96 3.54 4.32 3.99 3.73 5.77 5.1 4.14 1.01 0.36 2.19 0.03 0.41 0.0 0.87 1.15 0.34 5.8 5.42 5.55 1.64 1.86 1.69 1.23
8.99 8.6 6.7 10.04 9.86 10.28 9.86 8.29 9.36 9.04 8.78 8.22 9.8 26.44 9.39 12.66 4.63 2.87 9.71 6.6 4.46 9.44 5.75 7.11 11.71 10.96 6.2 8.21 6.56 5.42 3.0 3.55
19.3 27.13 32.19 32.47 30.33 33.58 31.92 31.81 29.93 29.19 27.6 23.36 21.76 42.01 49.28 19.12 21.65 16.8 18.31 7.2 4.79 10.81 27.01 25.64 20.65 15.18 24.35 28.89 19.31 20.24 15.47 16.02
2.54 1.93 1.21 1.58 1.85 1.71 2.08 2.46 2.98 2.04 3.39 2.52 6.6 6.78 4.36 4.31 0.71 0.6 2.74 6.64 0.0 0.07 1.24 1.86 0.0 4.12 2.95 2.27 0.56 0.78 1.16 2.59
28.09 29.7 26.53 34.46 31.75 32.18 32.49 33.76 33.86 33.48 33.19 28.65 43.91 47.33 54.76 46.2 26.55 26.32 38.23 32.84 11.11 30.08 34.29 38.07 36.63 32.0 30.17 34.56 24.98 29.25 27.52 30.55
16.09 21.79 19.89 24.23 23.13 23.09 19.71 18.05 21.18 17.55 19.4 15.96 19.14 29.6 37.1 20.31 18.06 12.08 22.52 4.28 6.35 3.95 19.71 18.41 24.22 14.48 19.74 17.85 13.46 14.63 7.85 7.76
14.29 17.38 20.23 21.14 18.93 19.85 16.06 21.02 19.8 16.19 16.5 13.53 21.84 20.23 27.27 20.5 10.82 9.32 12.22 1.29 9.42 11.14 15.37 13.95 14.92 17.77 16.17 15.34 9.18 10.03 4.92 6.44
3.3 2.58 2.7 2.77 2.81 3.29 3.25 4.13 3.09 4.7 3.56 3.54 3.64 7.93 9.03 4.03 1.34 0.37 2.11 2.79 0.85 1.42 2.19 1.98 1.89 5.98 6.53 5.63 1.23 1.12 1.49 1.41
70.41 88.93 96.64 107.83 107.5 117.54 95.77 95.22 86.65 88.1 74.0 66.34 69.23 127.52 128.87 76.09 65.88 67.36 92.29 16.33 18.07 9.76 79.61 80.5 52.99 86.14 85.62 80.24 68.01 70.92 74.38 84.06
56.0 64.57 67.67 63.51 67.78 64.81 61.64 68.09 66.9 71.78 67.39 56.23 74.53 93.18 101.02 72.73 44.36 35.22 63.81 27.16 43.4 53.13 61.17 62.97 56.55 57.55 46.21 48.78 43.96 46.46 37.0 42.41
24.76 34.37 34.94 36.34 38.43 35.83 28.16 26.25 21.74 23.7 21.28 17.67 59.21 59.18 86.7 64.64 35.18 29.48 34.27 6.53 10.24 40.67 41.17 41.8 13.71 29.16 25.96 28.3 23.09 26.74 16.38 21.7
99.19 93.02 92.08 100.9 106.68 106.78 108.02 115.1 110.49 114.38 112.95 102.62 117.63 216.64 275.96 119.65 66.76 53.88 100.47 150.23 65.25 95.4 73.61 85.14 190.84 142.34 132.78 132.99 66.82 74.1 70.28 65.79
19.75 27.81 28.92 31.42 30.32 32.27 27.38 22.29 24.59 20.51 21.05 20.11 21.13 25.3 47.04 21.21 19.85 12.95 13.96 2.96 18.26 3.88 22.86 24.33 18.89 13.47 18.7 22.98 13.93 16.5 9.56 10.93
33.42 47.1 53.2 51.87 54.23 61.23 53.11 46.92 45.27 39.99 37.63 32.52 34.38 62.69 74.39 43.3 37.08 29.08 33.61 8.03 18.41 0.67 33.7 41.43 47.81 23.83 43.36 52.73 26.41 30.89 26.23 28.94
29.8 31.46 30.27 30.55 31.55 29.49 27.51 30.78 31.88 31.35 29.82 29.06 30.37 33.26 37.8 32.3 27.7 17.65 33.36 12.64 8.98 6.1 28.31 27.91 20.19 26.67 23.14 24.29 24.74 26.13 13.26 13.7
55.12 55.77 58.96 62.25 60.69 59.86 59.05 61.96 63.93 63.77 59.6 54.09 65.12 101.85 96.2 65.89 44.97 37.85 62.04 48.2 23.29 36.74 64.95 76.62 63.01 68.5 58.64 60.93 43.32 45.15 45.29 50.77
39.48 43.11 47.56 44.04 49.71 52.63 45.92 53.98 44.45 40.61 48.04 36.87 41.63 53.2 64.96 54.6 31.67 31.61 37.72 20.27 23.79 18.04 40.4 37.5 50.86 37.92 49.42 60.61 31.88 34.12 24.76 23.52
67.55 61.53 56.44 58.15 57.83 57.03 52.77 65.46 57.88 57.99 62.32 53.19 80.49 122.51 132.11 83.86 42.89 39.44 70.59 63.55 67.01 39.09 63.91 74.38 65.64 97.1 96.27 85.02 42.91 44.22 49.21 54.2
19.11 18.43 17.34 20.33 16.26 18.02 15.31 21.7 23.54 27.1 26.14 24.07 5.75 29.25 32.39 5.93 4.23 1.31 6.44 0.39 3.33 1.88 3.99 4.28 7.85 36.03 21.93 22.53 4.55 4.54 3.9 3.53
14.95 13.41 9.49 15.9 15.92 12.61 14.28 17.41 16.15 17.8 17.47 16.89 33.08 50.05 41.11 28.99 9.37 11.18 17.31 35.04 8.63 5.08 10.37 11.15 18.43 22.71 14.02 12.92 10.58 10.19 9.89 10.86
83.68 97.52 90.8 100.19 108.74 105.3 110.43 97.56 79.39 67.54 79.64 75.82 112.98 271.23 333.37 111.56 83.23 91.08 100.8 184.12 98.55 109.48 84.34 92.51 85.92 164.68 186.96 155.38 66.06 70.51 95.91 102.97
24.76 22.28 24.8 25.23 32.54 27.99 28.52 21.31 23.07 17.53 18.35 16.28 28.01 53.23 71.46 35.74 20.39 26.33 38.15 30.68 17.0 8.94 26.66 30.98 22.47 25.1 46.68 41.16 23.59 25.71 19.12 25.4
76.63 68.25 64.12 67.47 72.79 74.48 57.27 68.5 61.26 59.55 60.06 54.0 104.19 141.73 155.46 116.24 44.51 36.32 73.95 24.54 21.61 77.18 65.52 67.5 51.68 88.12 85.35 84.05 48.57 52.45 44.55 47.37
5.08 4.87 4.18 6.05 6.3 5.67 3.39 5.79 4.98 3.68 5.36 4.06 2.46 11.48 8.76 2.0 0.79 0.06 1.57 0.76 0.21 0.39 0.94 0.71 1.51 6.51 6.84 6.3 0.42 0.69 0.53 0.24
16.09 16.59 13.58 16.23 18.94 17.78 17.5 19.38 23.1 16.73 20.64 18.04 12.51 26.05 23.18 11.19 3.63 3.02 5.11 2.54 2.84 2.92 9.51 9.75 7.09 26.92 16.94 17.79 3.98 4.52 2.91 2.74
1.24 1.4 1.72 1.55 1.84 1.75 2.1 1.04 1.5 1.5 1.42 1.47 1.28 4.23 4.37 1.49 0.47 0.2 2.91 4.18 0.97 2.5 0.45 0.6 3.31 3.09 2.34 3.71 0.31 0.57 0.1 0.15
19.58 17.15 16.86 21.16 21.16 18.23 19.38 18.36 22.39 20.76 20.29 21.52 13.04 28.07 28.77 12.46 12.47 8.75 7.93 16.48 7.06 14.81 13.21 13.0 23.15 18.67 29.51 29.52 10.9 12.96 9.44 9.59
20.59 19.23 15.55 17.77 15.86 16.13 17.01 19.8 20.3 20.77 20.99 21.43 9.75 18.69 18.85 13.33 9.9 6.2 14.93 8.22 7.03 10.19 9.16 8.72 12.8 20.63 19.96 19.82 9.56 9.37 8.57 8.52
0.64 0.47 0.64 0.68 0.29 0.63 0.67 0.69 0.86 0.53 0.62 0.5 0.86 7.93 10.38 2.08 0.37 0.7 0.57 3.54 0.39 2.2 0.31 0.39 0.4 0.18 0.91 1.19 0.29 0.5 0.3 0.31
5.38 7.69 6.87 6.33 7.25 6.56 5.01 4.55 5.73 5.15 5.35 4.28 18.78 18.09 27.28 21.15 5.84 3.31 10.82 5.04 0.69 5.63 8.5 10.51 5.36 5.68 5.02 4.67 3.73 4.9 1.7 2.65
3.53 3.22 4.74 3.58 2.49 4.23 3.54 3.81 4.14 3.7 4.89 3.8 4.33 6.53 4.75 3.85 1.13 0.2 2.16 2.47 2.01 1.43 1.63 2.16 3.75 3.32 3.91 3.97 0.96 1.39 1.75 2.15
1.56 1.91 1.7 4.44 6.44 3.08 1.73 3.78 3.03 3.23 2.28 2.05 11.33 22.55 41.29 12.38 0.84 0.0 6.14 18.87 2.79 1.47 0.99 2.03 2.47 4.17 5.73 7.34 0.59 0.84 0.78 0.5
0.53 0.83 0.2 1.03 1.34 0.77 0.58 0.63 0.85 0.61 0.58 0.69 3.43 3.49 7.92 5.09 0.25 0.09 4.23 2.6 0.24 0.61 0.33 0.65 0.88 1.1 1.19 1.13 0.26 0.52 0.19 0.17
9.97 10.77 9.34 9.82 9.5 11.97 9.66 11.28 11.2 11.25 10.36 9.5 15.19 27.18 13.01 15.32 4.83 1.03 8.19 2.3 1.32 11.19 6.95 6.64 8.26 10.41 10.82 7.51 5.97 6.46 8.11 4.44
13.91 15.11 9.99 13.59 10.82 14.47 13.06 12.3 17.28 13.95 12.34 13.38 8.83 26.48 43.33 10.33 4.51 5.14 7.6 33.47 17.16 11.8 6.24 7.11 29.2 20.86 15.5 14.02 5.27 6.82 2.55 3.14
13.17 12.89 12.83 13.78 14.96 14.66 15.76 17.06 14.03 15.1 15.65 13.06 15.74 19.02 19.45 18.48 8.44 4.58 11.89 20.83 2.51 8.54 9.05 9.74 12.34 21.7 22.51 22.25 8.63 9.33 6.71 6.9
1.16 0.84 0.84 1.35 0.96 0.9 0.52 0.94 0.63 0.56 1.12 0.4 2.6 26.55 11.09 4.62 1.58 2.24 2.26 9.4 0.0 1.88 3.81 4.35 1.58 1.81 1.32 2.23 1.62 1.54 1.29 0.66
55.02 57.54 53.7 63.67 69.98 61.88 59.47 61.67 61.9 59.42 56.34 54.88 45.15 90.93 73.55 38.65 15.04 2.03 33.1 21.9 7.2 7.28 21.75 26.59 48.35 82.99 74.56 73.45 14.64 14.72 12.85 11.49
13.08 15.17 16.43 18.27 15.38 18.26 16.01 15.71 19.2 17.72 20.69 15.01 7.53 24.41 19.99 7.03 2.17 0.54 6.14 1.28 1.49 3.44 3.76 4.43 6.77 39.16 29.69 24.45 2.33 2.24 1.91 1.65
1.85 3.0 2.78 3.84 2.81 4.78 3.07 2.66 1.84 3.5 2.49 2.65 1.61 9.22 9.72 1.55 0.3 0.0 0.59 14.23 1.8 7.45 0.67 1.22 5.67 4.41 2.5 3.41 0.76 0.3 0.45 0.36
1.11 0.91 0.82 1.46 1.03 1.15 1.89 1.76 2.41 0.69 1.52 1.65 0.2 2.37 2.08 0.15 0.08 0.16 0.1 0.0 0.0 0.0 0.02 0.15 0.11 3.1 2.45 2.64 0.03 0.1 0.0 0.1
3.51 3.66 0.91 3.23 1.21 1.88 3.6 3.16 5.91 4.1 4.47 4.82 1.87 4.74 5.5 2.52 0.82 0.04 1.49 0.14 0.0 0.12 0.87 1.45 0.0 4.59 4.02 3.49 0.94 1.13 0.5 0.59
0.6 0.57 0.18 0.74 0.39 0.73 0.88 0.5 1.19 0.64 0.8 0.82 0.48 2.49 3.2 0.46 0.09 0.05 0.14 1.14 0.07 0.08 0.3 0.15 0.06 1.24 2.27 2.25 0.04 0.15 0.12 0.1
2.3 2.15 2.96 3.7 2.67 2.55 2.35 1.75 2.56 1.68 1.78 2.13 2.34 9.29 5.71 3.13 0.84 1.27 1.42 3.45 0.15 0.0 1.54 1.5 0.69 3.4 2.81 2.89 1.02 0.85 0.53 0.54
9.34 7.47 5.82 7.4 6.95 7.7 5.54 7.86 9.08 9.34 10.19 10.75 11.71 14.7 14.13 11.84 1.6 0.18 2.47 0.88 2.48 0.71 3.34 3.35 4.07 12.17 8.35 8.06 2.0 2.27 2.47 2.86
4.64 4.72 4.6 4.24 5.59 4.53 3.44 4.03 3.52 4.43 4.97 4.45 4.39 7.51 7.62 5.0 2.47 1.74 5.48 4.74 1.47 2.21 2.79 3.1 4.9 6.41 6.97 7.23 2.07 2.37 2.5 3.31
38.3 50.75 52.23 51.65 47.75 49.92 45.98 47.64 46.6 49.5 45.92 42.82 45.67 61.24 64.51 55.89 36.47 27.98 36.65 13.81 18.38 11.74 47.33 45.98 43.44 36.56 29.11 31.02 31.46 34.92 22.37 23.17
23.5 21.35 22.6 22.74 19.05 22.5 22.19 24.73 22.55 23.24 22.32 21.73 21.08 20.51 25.64 25.75 14.9 9.84 25.29 7.49 3.96 2.95 16.99 17.48 19.86 23.4 21.07 19.03 17.9 17.48 14.5 15.57
39.81 42.43 39.95 46.31 41.26 39.62 41.03 42.48 40.0 38.01 39.68 33.47 35.57 84.59 57.25 45.96 22.3 20.33 25.59 25.48 21.9 34.13 25.82 25.19 42.9 44.73 52.06 49.94 19.39 21.39 19.11 21.4
11.04 14.66 13.96 13.5 10.94 13.02 13.23 11.58 11.73 13.3 12.07 10.68 11.82 13.19 15.97 11.31 7.64 1.46 10.2 2.63 6.58 10.84 9.22 8.89 11.34 12.36 16.69 15.29 6.02 6.63 6.89 8.2
34.43 33.09 32.52 34.77 37.93 34.51 31.69 35.25 36.31 32.42 35.21 30.92 39.37 51.66 48.44 41.33 18.84 16.8 34.29 49.54 20.36 21.87 29.58 29.97 21.0 58.14 57.77 54.24 19.75 20.28 16.43 17.1
8.22 8.81 7.58 8.06 9.18 8.81 7.88 10.68 8.53 7.92 8.29 7.54 6.65 8.42 9.0 7.54 4.91 1.58 6.5 4.62 2.41 3.56 5.85 6.5 7.26 10.35 11.27 9.86 5.05 5.4 5.54 5.7
54.28 52.96 53.6 58.72 55.28 58.86 59.27 60.94 62.47 59.5 62.83 53.39 61.33 79.11 90.14 74.54 40.23 31.85 54.99 79.97 44.55 80.61 51.71 53.61 41.74 78.81 69.78 69.37 37.56 39.37 33.81 35.3
10.88 16.27 21.23 19.89 12.9 25.6 18.49 22.39 18.85 16.69 13.66 11.92 4.65 36.11 23.33 4.75 1.83 1.42 2.14 6.83 4.27 12.5 1.53 1.82 24.03 11.89 13.66 14.37 0.57 1.54 0.14 0.81
9.63 11.37 9.3 13.73 14.48 11.99 11.21 11.22 10.17 9.55 10.34 8.34 35.62 31.58 45.29 30.33 11.91 6.03 13.34 2.92 13.19 9.5 21.81 25.02 7.64 9.76 13.17 16.13 10.6 14.06 6.16 6.83
62.79 52.77 53.49 63.41 74.65 77.07 62.82 68.91 67.92 68.54 63.2 55.44 49.24 138.87 133.42 47.65 51.29 56.67 103.61 52.97 37.16 20.93 55.24 58.69 96.83 71.69 82.99 84.07 43.33 50.15 54.35 50.83
25.15 23.08 25.88 25.31 32.04 31.02 19.7 24.3 24.57 22.28 22.26 19.66 23.04 33.07 39.61 26.09 14.83 11.93 22.21 14.62 13.55 15.75 19.58 20.14 31.62 28.72 30.64 33.37 13.56 15.13 13.64 12.58
27.28 24.87 26.39 28.24 25.62 26.18 25.59 29.27 31.04 33.48 32.18 28.8 36.2 41.67 31.01 33.98 14.6 8.18 24.53 11.24 16.35 10.09 20.94 26.28 23.66 38.13 23.39 28.92 20.03 20.11 13.83 11.0
32.08 28.79 26.04 30.29 31.53 26.94 23.14 21.02 25.69 26.15 28.51 24.38 53.13 72.94 75.8 59.24 18.09 17.4 35.85 17.99 3.65 34.2 27.72 30.27 6.61 29.64 32.29 31.97 18.32 21.16 17.81 23.86
30.4 22.92 25.63 26.09 26.98 27.36 22.94 26.01 35.53 42.39 41.95 35.06 51.3 63.87 67.34 48.67 12.96 11.98 18.23 6.58 13.08 30.66 16.26 19.4 17.94 41.79 29.49 28.81 17.87 20.93 16.32 19.12
41.61 44.43 39.14 44.57 44.43 40.94 38.1 46.16 47.89 44.04 44.12 41.77 46.39 53.02 43.76 53.48 23.64 18.41 28.37 25.07 12.25 30.16 29.17 29.98 46.47 48.12 46.49 42.05 25.79 27.37 22.09 23.99
42.51 60.1 67.2 76.86 78.74 84.74 80.17 67.97 63.01 63.02 59.13 48.24 64.94 127.49 153.34 71.41 49.97 34.15 46.04 26.69 10.28 7.79 73.95 67.82 45.35 64.91 84.88 93.93 40.94 44.1 30.35 32.91
8.25 8.66 8.88 8.59 8.83 10.4 11.06 10.15 8.98 9.52 8.78 7.83 12.32 20.4 35.24 13.42 6.96 5.22 12.73 25.69 10.62 8.17 6.24 7.47 13.05 9.45 15.86 15.85 6.18 6.84 9.06 7.53

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)