Heatmap: Cluster_344 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
0.09 -0.1 -0.27 0.2 1.07 0.99 0.81 0.23 1.52 0.57 -0.41 0.73 -3.24 1.83 -0.27 -1.55 0.78 1.03 0.3 - - - -3.44 - - -1.36 -1.05 -0.14 -0.1 -0.79 -0.23 -2.46
0.14 0.12 0.12 -0.03 0.05 0.13 0.21 0.04 0.26 0.12 0.22 0.15 -1.08 0.88 -0.1 -0.29 0.33 0.04 0.13 0.01 -0.32 -0.52 -0.12 -0.21 -0.35 -0.36 -0.3 -0.37 0.1 0.18 -0.21 -0.11

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.