Heatmap: Cluster_145 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00006p00092520 (evm_27.TU.AmTr_v1.0_scaffold00006.33)
- - - - 2.83 - - - - - - - - - - - - - - - - 3.9
AMTR_s00006p00166300 (evm_27.TU.AmTr_v1.0_scaffold00006.63)
- - - - 3.27 - - - - - - - 0.22 1.13 - - - - - - - 3.17
AMTR_s00008p00235300 (evm_27.TU.AmTr_v1.0_scaffold00008.159)
- - - 2.23 3.75 - - - - - - - - - - - - - - - - 1.93
AMTR_s00012p00055340 (evm_27.TU.AmTr_v1.0_scaffold00012.15)
2.38 - - - 1.23 - 0.88 - 1.01 -0.19 - - 0.48 0.59 0.74 - -0.09 - - -1.35 - 1.94
AMTR_s00017p00216820 (evm_27.TU.AmTr_v1.0_scaffold00017.154)
- - - - 2.96 - - - 1.96 - - - - - - - - - - - - 3.37
AMTR_s00022p00165870 (evm_27.TU.AmTr_v1.0_scaffold00022.172)
- - - - 3.68 - - - - - - - 2.42 - - - - - - - - 1.95
AMTR_s00022p00192340 (evm_27.TU.AmTr_v1.0_scaffold00022.214)
- - - - 3.41 - - - - - - - - -0.14 -1.19 - 1.64 - - - - 2.79
AMTR_s00022p00228590 (evm_27.TU.AmTr_v1.0_scaffold00022.302)
- - - - 3.37 - - - - - - - - - - - - - - - - 3.55
AMTR_s00023p00086590 (evm_27.TU.AmTr_v1.0_scaffold00023.42)
- - - - 2.68 - - - - - - - - - - - - - - - - 3.96
AMTR_s00025p00192970 (evm_27.TU.AmTr_v1.0_scaffold00025.239)
- - - - 3.32 - - - - -0.36 - - - - 2.62 - - - - - - 2.36
AMTR_s00025p00225380 (evm_27.TU.AmTr_v1.0_scaffold00025.318)
- - - -2.03 3.33 - -3.92 - -5.31 -4.56 -0.44 1.34 -0.52 - 0.59 - -1.3 -0.44 - - -0.59 2.09
AMTR_s00031p00056270 (evm_27.TU.AmTr_v1.0_scaffold00031.20)
- - - - 4.07 - - - - - - - 0.81 - 0.01 - - - - - - 1.26
AMTR_s00038p00224660 (evm_27.TU.AmTr_v1.0_scaffold00038.206)
- - - - 2.88 - - - - - - - - - - - - - - - - 3.87
AMTR_s00041p00141220 (evm_27.TU.AmTr_v1.0_scaffold00041.100)
- - - - 3.99 - - - - 1.21 - - - - - - - - - - - 1.92
AMTR_s00041p00175010 (evm_27.TU.AmTr_v1.0_scaffold00041.132)
2.51 - - - 2.53 - -0.87 - -0.17 0.57 - - -0.58 -0.84 -0.13 - -0.84 - - -1.22 - 2.17
AMTR_s00044p00101060 (evm_27.TU.AmTr_v1.0_scaffold00044.70)
- 0.75 - -3.52 2.6 - 0.03 0.67 -0.19 -0.56 0.75 1.27 -1.71 -3.51 0.38 - 1.17 -1.25 -4.81 -3.76 - 0.53
AMTR_s00044p00119110 (evm_27.TU.AmTr_v1.0_scaffold00044.98)
- - - - 2.27 - 0.33 - 0.74 0.44 - - -0.19 -0.46 -0.32 - 0.31 - - -0.81 -0.35 2.98
AMTR_s00044p00119130 (evm_27.TU.AmTr_v1.0_scaffold00044.99)
- - - - 1.94 - 0.02 - 0.6 0.71 - - 0.29 -0.86 -0.46 - - - - -2.92 0.57 3.3
AMTR_s00044p00129040 (evm_27.TU.AmTr_v1.0_scaffold00044.115)
- - - - 2.82 - 1.58 - -1.89 0.5 - - - -1.32 0.87 - - - - -1.31 - 2.93
AMTR_s00044p00129060 (evm_27.TU.AmTr_v1.0_scaffold00044.116)
- -0.97 0.14 - 2.72 - -0.54 - - - - - - -0.05 1.36 - - - - - - 3.26
AMTR_s00046p00041330 (evm_27.TU.AmTr_v1.0_scaffold00046.11)
- - - - 3.36 - - - - - - - - 0.67 1.58 - - - - 1.09 - 2.32
AMTR_s00048p00147210 (evm_27.TU.AmTr_v1.0_scaffold00048.96)
- - - - 3.21 - - - - - - - - - - - - - - - - 3.67
AMTR_s00049p00149150 (evm_27.TU.AmTr_v1.0_scaffold00049.130)
- - - - 3.14 - - -5.21 - -5.18 - - -3.45 -2.87 -0.84 - -4.41 -2.47 - -6.37 - 3.59
AMTR_s00050p00210650 (evm_27.TU.AmTr_v1.0_scaffold00050.72)
- - - -4.51 3.48 - - - -4.84 -4.06 -2.01 -0.14 -0.39 -3.16 1.74 - -0.19 -1.33 - - - 2.03
AMTR_s00050p00214410 (evm_27.TU.AmTr_v1.0_scaffold00050.78)
- - - - 2.46 - - - -0.62 - - - - - -1.16 - - - - - - 3.94
AMTR_s00053p00096150 (evm_27.TU.AmTr_v1.0_scaffold00053.52)
-0.94 -1.49 -3.18 -0.33 2.22 - -7.16 -7.63 -9.19 - -3.53 -2.36 0.8 1.01 -1.47 -2.92 -3.14 -0.74 -2.66 0.24 -3.71 3.15
AMTR_s00057p00042470 (evm_27.TU.AmTr_v1.0_scaffold00057.22)
1.07 - 1.22 - 2.28 - -5.67 0.06 -0.59 0.47 -4.06 - -1.59 -1.66 0.81 -2.24 -4.76 -2.13 -3.22 -2.35 -1.03 2.55
AMTR_s00057p00088900 (evm_27.TU.AmTr_v1.0_scaffold00057.64)
- - - - 3.78 - - - - - - - - 0.73 - - - - - - - 2.71
AMTR_s00057p00204520 (evm_27.TU.AmTr_v1.0_scaffold00057.241)
-3.07 - - -2.71 2.49 - -7.78 -6.19 -9.99 -8.23 -1.11 -1.81 -1.57 -1.7 2.22 0.25 -3.95 0.47 0.79 0.16 1.04 1.32
AMTR_s00057p00211800 (evm_27.TU.AmTr_v1.0_scaffold00057.263)
- - - - 3.05 - - - -4.54 - -0.49 - 0.14 - 2.45 -0.63 - 0.05 - - - 2.25
AMTR_s00060p00189170 (evm_27.TU.AmTr_v1.0_scaffold00060.126)
- - - - 3.71 - - - - - - - -1.29 - 1.3 - - - - - - 2.6
AMTR_s00061p00215790 (evm_27.TU.AmTr_v1.0_scaffold00061.277)
- - - - 3.14 - -2.43 - -2.39 - - - - - 1.28 - - 1.95 - - - 2.7
AMTR_s00068p00102110 (evm_27.TU.AmTr_v1.0_scaffold00068.50)
- - - -0.24 3.08 -1.22 -5.26 -5.14 -8.22 -5.89 -4.52 - -2.34 0.09 1.94 - -4.88 -4.93 -3.77 -0.07 - 2.58
AMTR_s00092p00141990 (evm_27.TU.AmTr_v1.0_scaffold00092.108)
- - - - 3.51 - -0.42 - -0.88 -0.49 - - 1.94 -0.95 -2.04 - - - - - - 2.0
AMTR_s00094p00173460 (evm_27.TU.AmTr_v1.0_scaffold00094.24)
- - - - 4.12 - - - - - - - - - - - - - - - - 2.19
AMTR_s00096p00152730 (evm_27.TU.AmTr_v1.0_scaffold00096.98)
- - - 2.64 3.98 - - - - - - - - - - - - - - - - -
AMTR_s00098p00070840 (evm_27.TU.AmTr_v1.0_scaffold00098.7)
- - - - 3.76 - - - - - - - - - - - - - - - - 3.08
AMTR_s00104p00046840 (evm_27.TU.AmTr_v1.0_scaffold00104.10)
- - - - 2.18 0.79 -1.55 -1.57 -1.76 -2.41 -2.09 - 0.49 -0.57 -0.11 - -1.19 - - - 1.03 3.15
AMTR_s00109p00102860 (evm_27.TU.AmTr_v1.0_scaffold00109.95)
- - - - 3.33 - -1.64 - -3.34 - - - -1.03 - 1.85 - - - - - - 2.89
AMTR_s00109p00102920 (evm_27.TU.AmTr_v1.0_scaffold00109.96)
- - - - 2.95 - - - - -3.29 - - -1.4 -3.67 1.51 - - 2.06 0.08 -1.83 - 2.43
AMTR_s00111p00112330 (evm_27.TU.AmTr_v1.0_scaffold00111.87)
- - - - 3.17 - - - - - 0.67 1.73 0.02 -3.1 -0.18 - 1.21 - - -3.87 - 1.87
AMTR_s00131p00014400 (evm_27.TU.AmTr_v1.0_scaffold00131.1)
- - - - 1.98 - - - - -0.42 - - 1.24 0.55 -0.18 - - - - -1.51 - 3.62
AMTR_s00140p00093980 (evm_27.TU.AmTr_v1.0_scaffold00140.41)
-0.47 -0.32 -0.6 -0.22 2.91 -4.32 -10.62 -6.61 -13.42 -12.58 -1.89 -1.02 1.06 -1.62 2.04 -0.41 -2.51 -4.53 -3.88 -6.42 -9.85 1.61
AMTR_s00154p00043180 (evm_27.TU.AmTr_v1.0_scaffold00154.24)
3.53 - - -0.47 2.64 - - - - - - - - - - - - - - - - 1.83
AMTR_s00184p00021790 (evm_27.TU.AmTr_v1.0_scaffold00184.6)
- - - - 1.35 0.19 - - - - - 2.67 -0.89 1.6 2.44 - - - - -1.36 - 1.35
AMTR_s00193p00042490 (evm_27.TU.AmTr_v1.0_scaffold00193.10)
- - - - 3.74 - - - - - - - - - - - - - - - - 3.11
AMTR_s02098p00009190 (evm_27.TU.AmTr_v1.0_scaffold02098.1)
- - - - 3.56 - - - - - - - 1.7 - 0.99 - - - - - - 2.31
AMTR_s03330p00010420 (evm_27.TU.AmTr_v1.0_scaffold03330.1)
- - - - 3.03 - - - - - - - - - 3.29 - - - - - - 2.01
AMTR_s05210p00006090 (evm_27.TU.AmTr_v1.0_scaffold05210.1)
- - - -3.09 0.85 - 1.43 - 1.19 0.75 - - -1.61 -1.48 -1.93 - 0.21 - 0.18 - - 3.35

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.