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Heatmap: Cluster_175 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
-0.11 -0.19 -0.21 0.17 0.4 0.14 0.05 0.42 0.36 0.27 -0.0 0.19 -3.35 -3.39 0.48 -2.48 -0.53 -0.74 -1.0 0.29 0.88 -0.68 -1.63 -2.14 0.63 1.29 1.15 1.28 -0.39 -0.42 -1.07 -1.44
-0.3 0.02 -0.01 0.16 0.23 0.09 0.13 0.18 0.07 0.13 -0.01 -0.17 -0.59 -0.45 -0.01 -0.39 -0.76 -1.13 -0.54 -1.12 0.13 -0.07 -0.68 -0.74 0.42 0.91 1.3 1.42 -0.79 -0.69 -0.62 -0.42
-0.36 -0.26 -0.31 -0.24 -0.06 -0.13 -0.22 -0.13 -0.3 -0.29 -0.46 -0.4 -1.18 -0.96 -0.41 -0.61 -0.65 -0.56 -0.23 0.99 -2.02 0.17 -0.49 -0.39 0.51 0.96 1.76 1.43 -0.29 -0.31 -0.37 -0.37
-2.61 -3.22 -0.91 -0.87 - - - - -2.46 - -1.33 - -0.45 0.5 0.39 -1.57 -1.41 -1.76 -0.73 2.07 1.4 1.5 -0.98 -0.89 0.75 2.09 1.37 2.16 -2.88 -0.82 -1.68 -1.98
-0.2 -0.3 -0.43 -0.31 -0.19 -0.54 -0.26 -0.17 0.09 -0.11 -0.12 -0.17 0.19 -0.08 0.05 0.24 -0.19 -0.56 0.2 0.24 -2.78 -0.66 -0.03 -0.23 -1.22 1.28 0.9 1.07 -0.12 0.01 0.05 0.16
0.2 0.02 -0.11 0.1 -0.1 0.1 -0.56 -0.39 -0.57 -0.5 -0.38 -0.19 -0.85 -0.18 -0.72 -0.35 -0.21 0.22 -0.14 0.39 -0.16 0.14 -0.07 -0.31 0.35 0.75 1.29 1.41 -0.62 -0.49 -0.86 -0.8
-0.27 -0.59 -0.43 -0.26 0.09 0.12 0.24 0.46 0.41 0.35 0.12 -0.01 -1.19 -1.57 0.67 -0.77 -0.39 -1.32 -0.46 0.11 -0.03 -0.12 -1.16 -0.87 -0.17 0.76 1.45 1.51 -0.41 -0.31 -1.01 -0.95
-0.43 -0.61 -0.79 -0.57 -0.92 -0.47 -0.35 0.01 -0.14 -0.26 -0.43 -0.43 -0.8 -1.51 -0.73 -0.28 -0.16 0.19 -0.18 -0.13 -1.91 -1.97 -0.43 -0.6 -0.74 1.4 1.94 1.95 0.13 0.23 -0.2 -0.11
0.12 -0.18 -0.13 -0.01 0.04 -0.12 0.0 0.19 0.1 0.16 0.06 -0.02 -0.41 -0.33 0.04 -0.03 -0.68 -0.95 -0.29 -0.17 -0.36 0.19 -0.57 -0.62 0.3 1.18 0.97 0.71 -0.64 -0.54 -0.24 -0.19
-0.09 -0.34 -0.33 -0.38 -0.24 -0.28 -0.11 -0.05 -0.08 -0.11 -0.16 -0.45 -0.7 0.21 0.35 -0.2 -0.62 -0.51 -0.21 0.38 0.0 1.05 -0.66 -0.71 -1.18 1.37 1.23 0.86 -0.58 -0.66 -0.58 -0.44
-0.04 -0.15 -0.21 -0.03 -0.04 0.16 0.1 -0.12 -0.1 -0.09 -0.25 -0.3 -0.13 -0.35 0.07 0.15 -0.54 -0.45 0.13 0.35 -1.17 -1.0 -0.46 -0.38 0.48 1.1 1.03 1.13 -0.31 -0.32 -0.69 -0.77
-0.33 -0.05 -0.06 -0.01 0.09 0.23 0.15 0.27 0.04 -0.09 -0.04 -0.46 0.25 -0.85 -0.21 0.23 -0.41 -0.87 0.17 -0.51 -0.88 -0.2 -0.29 -0.59 0.72 0.96 0.96 1.03 -0.28 -0.24 -0.95 -1.01
-0.13 -0.14 -0.35 -0.06 -0.12 -0.02 0.03 0.44 0.4 0.44 0.4 0.22 -0.37 -0.84 -0.45 -0.2 -0.76 -1.27 -0.26 -0.06 -0.73 0.08 -0.4 -0.02 0.47 1.23 0.78 0.66 -0.47 -0.42 -0.56 -0.56
0.13 -0.58 -0.59 -0.32 0.2 0.18 1.29 -0.97 -1.05 0.23 0.21 -1.15 -2.46 0.43 0.23 -4.2 -1.92 -1.58 -1.47 0.7 -0.72 -2.81 -1.78 -4.28 -0.45 2.18 2.34 1.35 -1.61 -2.0 -2.02 -2.72
0.77 0.07 0.92 0.5 0.94 0.64 0.37 1.0 0.72 1.4 0.79 0.89 -4.66 0.72 -0.21 -5.52 -4.82 - -1.58 - - - - -5.89 -2.39 1.63 1.33 1.34 - - - -
-2.15 - - -1.8 -0.12 0.5 -1.0 -0.44 -1.41 -3.44 0.07 - -2.01 -2.27 -0.44 0.25 -3.16 -1.31 1.3 1.26 - -0.63 0.07 0.74 -1.12 1.33 2.76 1.64 -1.22 0.31 -3.19 -0.66
0.88 0.6 0.63 0.24 0.95 0.15 0.53 0.76 0.84 0.98 1.28 0.66 -3.2 -1.18 -2.58 -1.33 -1.84 -1.43 -0.66 - -3.41 - -4.07 -4.78 -1.82 0.85 1.77 1.64 -2.2 -2.32 -2.54 -2.64
-3.75 -3.46 -4.12 -2.06 -1.93 -1.92 -2.23 -1.98 -2.89 -2.02 -4.9 -3.01 -1.53 0.01 -4.73 -1.39 -2.3 -0.82 -0.6 2.03 -1.9 -3.85 -2.39 -2.29 -1.79 2.77 2.87 2.29 0.03 -1.36 -0.37 -1.09
0.22 0.53 0.57 0.42 0.3 0.57 0.56 0.87 0.8 0.68 0.83 0.86 -2.69 -0.26 -0.03 -1.94 -2.62 -0.91 -1.52 -4.63 -0.8 - -2.36 -1.2 0.21 1.69 1.16 0.78 -2.31 -2.15 -3.56 -2.1
-0.4 -0.4 -0.62 -0.09 0.11 0.37 0.3 0.49 0.14 0.2 0.16 -0.09 0.06 -0.61 0.02 0.19 -0.81 -1.69 -0.42 0.59 -0.92 -4.72 -0.76 -0.28 0.12 1.16 1.36 1.16 -0.56 -0.33 -1.14 -0.82
-0.62 -0.96 -0.88 -1.39 0.25 0.25 0.69 0.79 0.57 0.51 0.28 -0.03 -1.14 -2.56 -0.74 -1.14 -0.5 -0.47 -0.52 -1.72 -0.44 -1.1 -0.49 -0.77 -0.52 1.43 1.46 1.51 -0.19 0.04 -0.3 -0.41
0.41 0.62 0.98 0.48 0.63 0.69 0.74 0.83 0.53 0.61 0.65 0.5 -4.1 0.07 0.28 -5.5 -4.74 -4.34 -3.27 -1.01 -1.36 -0.34 -4.46 -3.14 -1.25 1.19 1.72 1.45 -4.67 -5.25 -4.89 -5.96
-0.21 -1.13 -1.21 -0.87 -0.09 0.21 0.41 0.54 0.29 0.23 0.17 -0.11 -2.01 -2.01 -1.04 -1.22 -0.75 -1.65 -0.49 -0.2 0.75 -0.27 -0.67 -0.54 0.75 1.45 1.3 1.27 -0.36 -0.38 0.01 -0.33
-0.06 -0.74 -1.13 -0.83 -0.05 0.12 0.51 1.02 0.76 0.82 0.6 0.28 -1.16 -3.61 -2.34 -1.13 -0.84 -1.07 0.09 -2.5 -1.51 -1.39 -1.07 -1.35 -0.36 1.76 1.38 1.62 -0.17 -0.16 -0.72 -1.3
0.18 0.06 0.22 -0.16 0.64 0.46 0.29 0.62 0.53 0.56 0.56 -0.05 -3.81 -1.66 -0.66 -4.18 -2.09 -3.05 -2.65 0.82 -0.24 0.55 -2.58 -3.04 0.52 1.01 1.67 1.69 -2.45 -2.22 -1.91 -2.21
1.03 0.45 0.26 -0.11 -0.48 0.09 0.56 0.43 1.04 0.98 0.98 1.62 -1.56 1.2 -0.09 -0.03 -2.02 -1.78 -0.04 - - - -1.9 -2.26 -1.98 1.44 -0.63 -1.37 -0.89 -0.51 -0.82 -1.17
-0.48 -0.47 -0.34 -0.26 -0.22 -0.09 -0.11 0.08 -0.04 -0.07 -0.01 -0.2 -0.14 -0.22 -0.33 0.16 -0.41 -0.93 0.19 0.24 0.24 0.39 -0.31 -0.2 -0.5 1.03 0.94 1.08 -0.15 -0.06 -0.66 -0.63
-1.01 -1.06 -1.06 -0.53 -0.35 0.07 0.14 0.31 -0.16 -0.13 -0.61 -0.41 -0.31 -1.09 0.05 -0.31 -1.51 -1.91 -0.53 -0.16 -0.29 0.35 -0.67 -0.31 1.11 1.56 1.72 1.92 -1.17 -0.89 -2.38 -2.02
-0.96 -2.12 -2.1 -0.97 -0.2 -0.54 0.13 0.45 0.13 -0.1 -0.75 -0.37 -4.27 -2.69 -1.34 -2.31 -0.41 -6.29 -0.36 -0.54 -1.94 0.17 -0.25 -0.63 0.11 1.94 2.06 2.06 0.25 0.32 -0.08 -0.78
1.03 0.72 0.36 0.14 -0.0 0.49 0.22 0.43 0.05 0.26 -0.18 0.82 -7.6 -7.92 - -5.33 0.65 0.87 -0.62 1.77 0.75 -2.99 0.17 -0.88 -2.14 -0.48 -0.79 0.22 -0.35 -0.65 -0.66 -1.22
-0.13 0.11 -0.22 0.02 0.07 0.11 -0.02 0.25 0.08 0.08 0.02 0.08 -0.63 -1.28 -0.69 -0.53 -0.98 -0.96 -0.17 0.69 -1.22 0.06 -0.53 -0.49 0.81 1.33 1.14 1.18 -0.9 -0.99 -0.85 -0.95
-0.56 -0.58 -0.42 -0.34 -0.45 0.0 0.48 0.62 0.68 0.56 0.26 0.21 -1.17 -2.33 -0.49 -1.33 -1.07 -3.09 0.12 0.29 -0.72 -0.2 -0.95 -1.57 0.56 1.6 1.5 1.49 -0.95 -0.87 -1.42 -1.14
0.56 0.34 -0.02 0.45 0.25 0.7 0.1 0.27 0.83 -0.17 -0.09 -0.29 -1.53 -0.71 -0.22 -1.77 -0.56 -6.08 0.23 1.67 -4.16 -1.57 -0.76 -1.22 0.55 0.02 0.89 1.04 -0.71 -1.02 -0.9 -0.31
0.08 -3.36 - 0.15 1.92 -1.06 -0.77 -1.38 0.55 -0.62 -0.69 -1.73 -0.81 - 0.77 -1.04 -2.56 -2.45 - 3.23 0.16 - - -1.86 -0.32 -0.07 0.74 1.89 -3.11 -2.11 - -3.22
-0.57 -0.62 -1.31 -0.96 -0.53 0.83 0.75 1.15 1.14 0.72 0.4 -0.02 -2.92 -1.92 0.14 -1.85 -1.91 -3.87 -1.64 -2.77 -1.1 -2.28 -2.12 -1.97 -0.79 1.46 2.05 1.98 -1.23 -1.27 -0.78 -0.62
0.31 -0.11 -0.47 -0.02 -0.1 -0.21 -0.17 0.39 0.48 0.46 0.48 0.48 -0.35 -0.56 -0.46 -0.41 -1.33 -2.4 -0.5 -0.07 -0.31 0.66 -1.28 -0.95 0.87 0.99 0.87 0.66 -0.82 -0.7 -0.29 -0.26
-0.29 -0.09 0.04 0.05 0.18 -0.05 0.05 0.22 0.07 -0.28 0.15 -0.4 0.25 -0.17 -0.05 0.47 -0.06 -0.38 0.49 -0.82 -1.1 -0.08 0.02 -0.13 0.19 0.3 0.5 0.29 -0.13 -0.11 -0.25 -0.01
-0.5 -0.06 0.14 0.31 0.7 0.44 0.26 0.45 0.45 0.32 0.19 -0.24 -0.2 0.31 0.75 -0.07 -0.65 -1.1 -0.35 1.26 -1.04 -1.6 -0.49 -0.63 0.35 -0.57 0.25 0.09 -0.63 -0.4 -1.11 -0.78
-0.49 -0.76 -0.68 -0.52 -0.32 -0.55 -0.25 -0.18 -0.54 -0.9 -0.77 -0.59 -0.14 0.14 0.28 0.19 -0.16 -3.21 0.08 1.2 -0.57 -0.94 -0.02 0.12 0.68 1.41 1.09 1.31 -0.24 -0.31 -0.78 -0.73
-0.22 -0.26 -0.15 -0.23 -0.13 -0.1 0.19 0.2 0.08 -0.07 -0.07 -0.21 -1.29 -1.05 -0.98 -1.2 -0.61 -0.82 -0.67 0.28 -0.68 -0.08 -1.09 -1.15 0.61 1.39 1.68 1.68 -0.55 -0.55 -0.63 -0.72
0.12 0.19 0.21 0.24 0.29 0.28 0.1 0.12 0.04 0.03 0.07 -0.08 -0.3 -0.1 0.48 0.0 -0.37 -0.56 0.02 -0.74 -0.92 0.15 -0.26 -0.27 -0.79 0.49 0.86 0.77 -0.61 -0.6 -0.51 -0.36
1.02 0.5 0.41 0.26 -0.29 0.49 0.27 0.76 0.47 0.92 0.93 0.93 -2.02 0.87 0.08 -1.85 -2.34 -1.55 -0.81 -3.96 -2.06 -0.71 -2.29 -2.81 -0.76 1.29 1.22 0.77 -2.23 -2.69 -1.52 -1.91
-0.32 0.03 -0.04 0.14 0.41 0.29 0.21 0.34 0.13 0.22 -0.09 -0.2 0.07 -0.15 -0.24 0.05 -0.29 -0.74 0.03 0.61 -0.71 -4.08 -0.31 -0.45 0.36 0.25 1.0 0.54 -0.35 -0.47 -0.45 -0.18
-0.83 -0.63 -0.83 -0.79 -0.22 -0.3 -0.45 0.73 0.26 -0.17 0.11 0.11 -3.41 -1.92 -0.7 -3.24 -1.48 -6.78 -0.68 0.31 0.05 0.53 -1.13 -1.35 1.27 1.63 2.03 1.77 -0.76 -0.79 -1.62 -2.19
0.65 0.2 -1.2 0.23 -0.02 0.8 -0.22 0.58 0.7 0.41 0.54 0.67 -1.89 -2.47 -2.85 -1.54 0.15 -0.57 -0.35 1.76 -0.56 - -0.56 -1.17 -0.2 -0.3 -0.64 -0.11 0.41 0.52 0.07 -0.23
-0.58 -0.79 -0.58 -0.58 0.14 0.03 0.07 0.22 0.12 0.01 -0.11 -0.4 0.17 -0.85 -0.65 0.47 -0.66 -1.15 0.61 0.19 -0.7 0.43 -0.01 0.16 -0.11 1.14 0.79 0.74 -0.03 0.16 -0.89 -0.72
-0.6 -0.46 -0.22 0.15 0.1 0.02 0.02 0.31 0.01 -0.12 -0.25 -0.54 0.33 0.33 0.03 0.04 -0.29 -0.53 -0.66 -0.25 0.16 -1.35 -0.25 -0.29 -0.01 1.52 0.68 0.47 -0.14 -0.21 -0.21 -0.6
-0.24 -0.36 -0.2 -0.06 0.21 0.45 0.35 0.36 0.28 -0.11 0.09 -0.27 -1.62 -1.34 -0.1 -1.5 0.13 -0.25 -0.54 -0.15 0.18 0.06 -0.81 -0.76 0.21 -0.13 1.36 1.45 -0.15 -0.03 -0.52 -0.74
0.0 -0.04 -0.14 0.06 -0.0 0.12 -0.03 0.27 0.06 0.08 0.07 -0.09 -0.25 -0.26 0.04 -0.14 -0.51 -0.89 -0.18 -0.39 -0.31 0.31 -0.45 -0.31 0.85 0.42 0.79 0.56 -0.51 -0.33 -0.27 -0.05
0.1 0.07 0.03 -0.05 0.31 -0.06 -0.1 0.14 0.21 0.07 0.07 -0.06 -0.63 -0.26 -0.31 -0.44 -0.36 -0.86 0.06 -0.28 -0.12 -0.32 -0.05 -0.15 0.53 0.9 0.87 0.87 -0.32 -0.24 -1.21 -0.75
-0.43 -0.27 -0.43 -0.09 -0.09 -0.09 -0.14 -0.05 -0.04 -0.31 -0.21 -0.28 -0.28 -0.3 0.27 -0.01 -0.48 -0.91 -0.11 0.74 -0.63 0.25 -0.31 -0.28 -0.87 1.12 1.23 1.25 -0.36 -0.27 -0.62 -0.55
-0.34 -1.1 -1.36 -1.04 -0.7 -0.21 -0.04 -0.0 0.24 0.36 0.16 -0.02 -1.81 -2.33 -1.08 -1.77 -1.28 -1.15 -1.19 -0.71 0.61 0.28 -1.16 -1.09 1.19 1.85 1.87 1.48 -1.09 -1.03 -0.38 -0.05
-0.84 -1.61 -2.04 -0.79 0.28 0.7 0.66 0.93 0.6 0.43 0.34 -0.4 -3.77 -3.29 -0.27 -2.71 -0.85 -0.57 -0.86 -1.6 0.58 - -1.5 -1.86 1.18 0.75 1.83 1.91 -0.26 -0.28 -1.23 -1.53
-0.67 -0.52 -0.58 -0.19 0.11 -0.06 -0.01 0.18 -0.03 -0.03 -0.3 -0.32 -0.15 0.07 0.3 -0.07 -0.57 -0.8 -0.07 0.16 -0.28 -0.63 -0.52 -0.37 0.19 1.54 1.08 1.16 -0.35 -0.36 -0.98 -0.89
-0.6 -0.66 -0.27 -0.24 -0.21 -0.18 -0.23 -0.15 -0.18 -0.32 -0.3 -0.6 0.06 -0.44 -0.08 0.24 -0.49 -0.75 0.05 1.1 -0.27 0.48 -0.32 -0.27 0.32 1.2 0.88 1.13 -0.47 -0.33 -0.87 -1.04

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.