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Heatmap: Cluster_21 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00001p00054650 (evm_27.TU.AmTr_v1.0_scaffold00001.32)
 0.7 0.84 1.03 - -2.22 1.51 -0.58 -0.08 -0.83 -0.45 1.69 0.73 -1.42 -2.63 -2.14 - -0.0 0.98 -0.02 -3.77 -0.27 -3.81
AMTR_s00001p00260620 (evm_27.TU.AmTr_v1.0_scaffold00001.372)
 - - - - 4.46 - - - - - - - - - - - - - - - - -
AMTR_s00002p00256220 (evm_27.TU.AmTr_v1.0_scaffold00002.405)
 - - - - 4.1 - - - - - - - - 2.26 - - - - - - - -
AMTR_s00002p00259170 (evm_27.TU.AmTr_v1.0_scaffold00002.432)
 0.19 1.18 0.03 1.28 -0.07 -5.78 -8.64 -7.97 -8.06 -6.99 0.3 1.01 0.71 -0.92 0.07 2.19 -0.38 -0.03 -1.17 -1.41 -0.83 -5.82
AMTR_s00003p00159820 (evm_27.TU.AmTr_v1.0_scaffold00003.133)
 - - - - - - - - - - - - - - - - - - - - - -
AMTR_s00006p00261100 (evm_27.TU.AmTr_v1.0_scaffold00006.227)
 - - 3.39 - 1.52 - - - - - - - - - 1.28 - - - - - - 2.63
AMTR_s00007p00256530 (evm_27.TU.AmTr_v1.0_scaffold00007.301)
 - - - - - - - - 2.48 1.88 - - - 2.51 2.82 - - - - - - -
AMTR_s00009p00259650 (evm_27.TU.AmTr_v1.0_scaffold00009.312)
 - - - - 3.45 - - - - - - - 2.25 - 2.4 - - - - 0.08 - -
AMTR_s00010p00205090 (evm_27.TU.AmTr_v1.0_scaffold00010.197)
 -0.14 -1.29 1.15 -2.98 -1.86 -0.79 0.59 -1.22 0.76 0.78 1.62 1.38 -0.94 -0.76 -0.74 -0.85 -0.52 0.73 -1.42 -0.41 -0.51 -6.44
AMTR_s00010p00220130 (evm_27.TU.AmTr_v1.0_scaffold00010.232)
 - - 2.23 - 2.02 - -3.96 - -1.75 -2.54 -0.45 -0.65 1.93 -2.09 1.1 - -1.1 -0.85 -0.42 -1.17 1.32 -1.12
AMTR_s00010p00245980 (evm_27.TU.AmTr_v1.0_scaffold00010.330)
 - - - - 3.2 - -0.91 - -1.6 - - - 0.35 - 3.1 - - - - 0.14 - 0.04
- - 1.65 - 1.96 - - - - -3.05 -1.72 0.09 -1.0 -0.92 -0.63 -0.54 -0.96 - -1.33 0.16 2.98 0.29
AMTR_s00011p00070060 (evm_27.TU.AmTr_v1.0_scaffold00011.11)
 - - - - - - - - - - - - - - - - - - - - - -
AMTR_s00011p00254250 (evm_27.TU.AmTr_v1.0_scaffold00011.166)
 - - 2.35 - 2.57 - - - -0.72 - - - - 2.08 0.39 - 0.44 - - -1.61 - 1.66
AMTR_s00012p00249210 (evm_27.TU.AmTr_v1.0_scaffold00012.242)
 - - - -1.61 2.7 - - - -1.72 - 0.46 - -2.68 -1.85 -5.23 1.66 -7.16 - 1.89 -2.02 2.56 -
AMTR_s00013p00027010 (evm_27.TU.AmTr_v1.0_scaffold00013.1)
 - - - - 3.94 - - - - - - - 1.05 0.46 - - - - - - - 1.66
AMTR_s00013p00159980 (evm_27.TU.AmTr_v1.0_scaffold00013.84)
 - - - - - - 1.4 - 1.74 3.38 - - - - 2.49 - - - - - - -
AMTR_s00018p00112680 (evm_27.TU.AmTr_v1.0_scaffold00018.50)
 0.34 1.42 -4.16 -1.98 1.76 -5.81 -1.6 -1.83 -0.54 -1.72 0.48 -0.33 -0.07 1.73 0.38 -1.51 0.38 0.1 -0.47 -0.9 -1.95 -0.42
AMTR_s00019p00137390 (evm_27.TU.AmTr_v1.0_scaffold00019.120)
 - - - - 3.46 - - - - - - - 0.46 - 3.26 - - - - - - -
AMTR_s00020p00125080 (evm_27.TU.AmTr_v1.0_scaffold00020.47)
 - - - - 4.27 - - - - - - - - 1.41 - - - - - - - -
- - - - 3.91 - - - - 2.8 - - - - - - - - - - - -
AMTR_s00021p00183530 (evm_27.TU.AmTr_v1.0_scaffold00021.141)
 - - - - 0.09 - -0.5 0.37 1.17 0.98 1.84 0.98 -1.29 -3.77 0.56 - -2.02 2.28 0.0 -1.61 -0.49 -4.53
AMTR_s00022p00152800 (evm_27.TU.AmTr_v1.0_scaffold00022.152)
 - - - - 2.96 - - - - - - - - - 3.83 - - - - - - -
AMTR_s00022p00207170 (evm_27.TU.AmTr_v1.0_scaffold00022.244)
 - - - - 2.73 - - - - - - - -0.58 - 2.52 - - - - 1.78 - 2.46
AMTR_s00022p00241650 (evm_27.TU.AmTr_v1.0_scaffold00022.348)
 - - - - 1.75 - 0.88 - -1.03 -0.34 - 2.58 -0.08 0.55 1.15 2.02 - - - - - -0.28
AMTR_s00027p00216140 (evm_27.TU.AmTr_v1.0_scaffold00027.78)
 - - - - 3.75 - - - 0.63 - - - 0.51 - 2.48 - - - - - - -
AMTR_s00028p00088140 (evm_27.TU.AmTr_v1.0_scaffold00028.23)
 - - - - - - - - - - - - - - - - - - - - - -
AMTR_s00036p00143280 (evm_27.TU.AmTr_v1.0_scaffold00036.65)
 - - - - 4.46 - - - - - - - - - - - - - - - - -
AMTR_s00037p00079420 (evm_27.TU.AmTr_v1.0_scaffold00037.27)
 - - - - 1.77 - -2.62 - -1.76 -2.75 1.04 1.21 0.28 0.65 -0.32 0.64 0.23 - -0.15 1.05 1.86 -0.5
AMTR_s00037p00217830 (evm_27.TU.AmTr_v1.0_scaffold00037.120)
 - - - - - - - - - - - - - - - - - - - - - -
AMTR_s00037p00224340 (evm_27.TU.AmTr_v1.0_scaffold00037.130)
 - - - - 1.57 - -5.04 - -4.06 -1.45 1.43 - -0.9 -2.02 -0.49 1.52 1.41 -0.42 -0.14 -0.82 2.71 -3.13
AMTR_s00041p00104000 (evm_27.TU.AmTr_v1.0_scaffold00041.70)
 - - - - - - - - - - - - - - - - - - - - - -
AMTR_s00041p00208950 (evm_27.TU.AmTr_v1.0_scaffold00041.205)
 - - - - 3.69 - - - 2.6 1.6 - - - - - - - - - - - -
AMTR_s00041p00218630 (evm_27.TU.AmTr_v1.0_scaffold00041.246)
 - - - - 2.87 - 1.65 - 0.82 0.68 - - -0.1 -0.77 0.11 - 2.12 - - - - 0.32
AMTR_s00042p00218920 (evm_27.TU.AmTr_v1.0_scaffold00042.68)
 - - - - 4.46 - - - - - - - - - - - - - - - - -
AMTR_s00044p00127630 (evm_27.TU.AmTr_v1.0_scaffold00044.111)
 - - - - 3.13 - - - - -1.97 - 1.6 -0.82 1.58 1.94 - 0.21 - - - 0.25 -2.1
AMTR_s00056p00175000 (evm_27.TU.AmTr_v1.0_scaffold00056.154)
 0.38 0.81 0.82 0.5 0.13 -2.03 -7.93 -2.58 -8.96 -7.57 1.17 0.8 -0.49 0.14 -0.98 2.39 -1.81 -0.82 -0.6 -1.92 -2.32 -0.44
AMTR_s00057p00060100 (evm_27.TU.AmTr_v1.0_scaffold00057.36)
 - - - - 2.83 - 0.3 - - 1.49 - - - 0.09 3.29 - - - - - - -
AMTR_s00059p00038070 (evm_27.TU.AmTr_v1.0_scaffold00059.21)
 0.85 1.91 1.55 -2.2 2.18 -6.01 -6.75 -3.53 -8.25 -7.55 -2.02 -1.42 -0.77 0.94 0.19 -0.99 -1.95 -1.76 -1.22 1.1 -1.03 -2.03
- - - - 3.23 - - - - - - - 0.19 - 1.94 - - - - 1.9 - 1.98
AMTR_s00060p00142680 (evm_27.TU.AmTr_v1.0_scaffold00060.84)
 - - - 2.21 2.88 - - - -0.52 - - - 0.33 - -0.1 - - - 2.84 - - -
AMTR_s00061p00112090 (evm_27.TU.AmTr_v1.0_scaffold00061.88)
 - - - - 3.05 - - - 1.41 1.31 - - 0.43 1.32 0.98 - - - - -0.33 - 0.97
AMTR_s00063p00136490 (evm_27.TU.AmTr_v1.0_scaffold00063.32)
 2.2 1.89 - - -1.85 - -0.22 - 1.27 0.47 0.1 - 0.01 -0.01 -0.8 1.32 - - 0.71 -0.87 - -1.25
AMTR_s00064p00177350 (evm_27.TU.AmTr_v1.0_scaffold00064.79)
 - - - - 3.42 - -1.89 - -2.95 -2.06 -1.61 1.85 -1.58 -2.18 2.12 - - - - - - 0.89
AMTR_s00066p00120870 (evm_27.TU.AmTr_v1.0_scaffold00066.114)
 - - - - - - - - - 2.76 - - - - - - - - - - - 3.93
AMTR_s00071p00016730 (evm_27.TU.AmTr_v1.0_scaffold00071.7)
 -5.39 2.13 - -6.13 1.53 -4.21 -4.28 - -4.2 -4.31 -0.32 -0.92 0.31 1.53 1.15 -1.77 1.57 -0.87 -0.13 0.39 -3.14 -0.58
AMTR_s00073p00155730 (evm_27.TU.AmTr_v1.0_scaffold00073.42)
 - - - - - - - - 4.46 - - - - - - - - - - - - -
AMTR_s00077p00191560 (evm_27.TU.AmTr_v1.0_scaffold00077.229)
 - -6.69 2.18 -4.96 1.48 - -1.95 -0.24 -2.56 -2.07 0.02 1.07 -0.46 -0.28 0.83 -1.08 -0.57 -0.57 1.06 -0.11 0.14 -0.43
AMTR_s00078p00184130 (evm_27.TU.AmTr_v1.0_scaffold00078.184)
 - - - - - - - - - - -4.71 4.0 0.59 - -10.89 -3.96 - - - - - 2.14
AMTR_s00081p00034970 (evm_27.TU.AmTr_v1.0_scaffold00081.15)
 - - - - 2.26 - 3.03 - - 3.18 - - - - - - - - - - - -
AMTR_s00081p00125690 (evm_27.TU.AmTr_v1.0_scaffold00081.44)
 - - - - 1.35 - - - - - - - - - 0.66 - - - - 2.73 - 3.49
AMTR_s00083p00121990 (evm_27.TU.AmTr_v1.0_scaffold00083.31)
 - - - - 4.06 - - - - - - - 0.52 - - - - - - 0.89 - 0.99
AMTR_s00084p00172500 (evm_27.TU.AmTr_v1.0_scaffold00084.44)
 - - - 0.4 2.51 - - - -2.47 -2.52 - - - 1.19 -0.29 - - - - 0.3 3.14 0.62
AMTR_s00099p00066170 (evm_27.TU.AmTr_v1.0_scaffold00099.46)
 - 2.43 -0.03 -3.2 2.61 - -6.71 -3.04 -1.58 -1.62 -1.29 -1.62 -1.79 -0.84 1.79 -2.45 -0.7 -1.82 -1.1 -1.16 -1.82 0.39
AMTR_s00113p00033740 (evm_27.TU.AmTr_v1.0_scaffold00113.10)
 - - - - - - - - - - - - 0.77 - 0.05 - - - - 3.26 - 3.27
-0.14 - - - 0.15 - -2.91 - -2.82 -2.57 1.19 2.09 -0.57 -0.75 -1.08 - 1.67 - 1.07 0.09 2.29 -
AMTR_s00118p00122320 (evm_27.TU.AmTr_v1.0_scaffold00118.26)
 - - - - 4.04 - 0.41 - - - - - - - 2.06 - - - - - - -
AMTR_s00129p00030530 (evm_27.TU.AmTr_v1.0_scaffold00129.10)
 - - - - 2.91 - - - - - - - 2.32 - - - - - - 2.8 - 1.34
AMTR_s00129p00101770 (evm_27.TU.AmTr_v1.0_scaffold00129.78)
 - - - - - - - - - - - - - - 4.46 - - - - - - -
AMTR_s00130p00089050 (evm_27.TU.AmTr_v1.0_scaffold00130.40)
 - - - - -0.92 - 0.97 - 1.41 -0.53 - - 2.67 -0.58 1.31 - - - - 0.16 - 2.47
AMTR_s00131p00040320 (evm_27.TU.AmTr_v1.0_scaffold00131.24)
 0.89 0.64 0.39 0.21 1.62 -0.25 -1.96 -4.61 -1.08 -1.24 0.02 -0.68 0.54 0.96 0.98 -2.92 0.51 -2.34 -2.52 -0.6 -2.93 0.39
AMTR_s00144p00041160 (evm_27.TU.AmTr_v1.0_scaffold00144.15)
 - - - - - - - - - - - - - - - - - - - - - -
AMTR_s00144p00049590 (evm_27.TU.AmTr_v1.0_scaffold00144.23)
 - - - - 2.57 - - - - - - - 1.68 - 2.69 - 1.49 - - 1.53 - -0.47
AMTR_s00154p00031240 (evm_27.TU.AmTr_v1.0_scaffold00154.11)
 0.72 -1.12 -0.25 1.66 -0.71 -4.77 -2.02 -5.4 -1.37 -1.42 0.59 0.13 0.73 0.19 0.51 1.66 -0.16 -0.07 -0.42 -0.8 -1.19 -0.62
AMTR_s00156p00028680 (evm_27.TU.AmTr_v1.0_scaffold00156.9)
 - - - - 4.46 - - - - - - - - - - - - - - - - -
AMTR_s00167p00018930 (evm_27.TU.AmTr_v1.0_scaffold00167.4)
 - - - - 4.32 - - - - - - - 0.18 - -0.12 - - - - - - -
AMTR_s00203p00033270 (evm_27.TU.AmTr_v1.0_scaffold00203.13)
 - - - - - - - - 0.02 2.28 - - 1.25 - - - - - - - - 3.78
AMTR_s01836p00003830 (evm_27.TU.AmTr_v1.0_scaffold01836.1)
 - - - - - - - - - - 0.87 - - 1.28 0.7 - - 2.95 - - 2.86 0.18
-0.91 - -1.12 -1.37 2.57 - - - -2.47 -1.88 - 1.79 -1.56 -0.94 -1.62 - 1.68 - - 0.78 2.22 -
AMTR_s04599p00000260 (evm_27.TU.AmTr_v1.0_scaffold04599.1)
 1.17 - - -2.89 1.52 - -6.45 - -4.69 -3.83 0.72 0.8 -0.32 -1.3 -0.88 - 0.53 0.16 -0.28 -0.44 2.79 -1.14

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.