Heatmap: Cluster_212 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
-0.45 -0.48 -0.29 -0.43 -0.39 -0.4 -0.18 -0.33 -0.49 -0.48 -0.28 -0.64 1.51 -0.12 -0.05 1.36 -0.25 -0.13 0.52 -0.27 -2.53 0.53 -0.22 -0.26 -0.2 0.36 -0.21 0.05 -0.48 -0.43 0.6 0.31
-0.39 -0.57 -0.53 -0.05 -0.24 -0.13 -0.38 -0.11 -0.01 -0.03 -0.02 -0.11 1.16 0.73 0.58 1.59 -0.77 -0.4 -0.67 -0.72 -1.6 -0.74 0.61 1.08 0.17 0.12 -0.41 -0.15 -0.87 -0.42 -1.14 -1.31
-0.46 -0.58 -0.6 -0.35 -0.02 -0.71 -1.08 -0.29 -0.42 -0.43 -0.57 -0.42 2.4 1.22 -0.32 2.04 -1.82 -4.08 -0.41 -1.16 -2.33 -2.24 -0.23 -0.08 1.38 0.58 -0.35 -0.13 -1.38 -1.24 -1.56 -2.72
-1.4 -1.93 -1.09 -1.26 -1.64 -1.82 -1.01 -1.53 -1.83 -1.11 -1.2 -1.83 2.6 1.98 0.17 2.27 -1.09 1.34 0.57 -5.11 -5.37 -2.08 -0.99 -0.69 -1.21 -0.07 -0.56 -0.9 -0.23 0.23 -0.87 -0.79
-0.33 -1.14 -1.71 -1.17 -0.7 -0.83 -0.97 -0.31 -0.92 -1.07 -1.35 -1.38 2.58 1.87 -0.89 -0.14 -1.32 -0.47 0.97 -2.63 -1.35 -3.78 -0.88 -0.32 1.34 0.85 0.4 0.45 -0.14 -0.49 -0.52 -2.15
-0.3 0.03 0.09 -0.02 0.04 0.11 -0.35 -0.32 -0.1 -0.07 -0.06 -0.45 1.7 0.74 -1.6 1.61 -0.33 -0.86 -0.86 -8.54 -0.78 -7.45 0.58 0.85 0.51 -0.81 -0.51 0.0 -0.12 0.26 -1.02 -1.19
0.13 -0.06 -0.16 -0.15 -0.36 -0.29 -0.48 -0.27 -0.18 -0.01 -0.17 0.03 1.32 1.29 -0.42 1.07 -0.2 -0.48 0.39 -1.12 0.76 -5.84 -0.15 0.03 0.56 -0.48 -1.09 -0.92 -0.2 -0.19 -0.55 -0.3
-1.89 -2.21 -2.38 -1.61 -0.79 -0.77 -0.8 -0.8 -1.11 -1.54 -1.57 -1.97 2.6 1.71 -0.43 2.19 -1.34 -0.68 1.49 -5.14 -1.2 - -1.12 -0.52 0.35 0.39 0.47 0.26 -1.09 -0.54 -1.38 -0.99
-0.41 -0.48 -0.37 -0.46 0.11 -0.17 -0.26 -0.18 0.12 -0.3 -0.19 -0.45 1.32 1.26 0.48 1.8 -1.07 -1.11 0.83 -5.3 -0.38 -1.2 0.12 0.57 0.4 0.17 -0.85 -1.47 -0.65 -0.39 -1.09 -1.59
-0.47 -0.63 -0.64 -0.33 -0.98 -0.53 -1.12 -0.71 -0.53 -0.83 -0.47 -0.53 2.07 1.31 0.24 1.26 -1.15 -0.59 0.35 -0.33 -0.61 -7.48 -0.79 -0.65 1.42 0.75 0.16 0.08 -0.56 -0.41 -1.06 -1.02
-0.98 -0.44 -0.51 -0.4 -0.53 -0.54 -0.53 -0.7 -0.72 -0.71 -0.99 -0.9 0.97 1.11 0.56 1.63 -0.49 -0.12 0.66 -1.69 -0.2 -1.45 0.56 0.78 1.18 -0.7 -0.71 -0.67 -0.23 -0.06 -0.19 -0.15
-0.32 -0.09 -0.12 -0.18 -0.11 -0.14 -0.3 -0.39 -0.24 -0.32 -0.38 -0.5 0.91 1.06 0.49 1.93 -0.45 -0.15 0.48 -2.5 -1.65 -2.42 0.03 0.21 -0.93 -0.46 0.37 -0.18 -0.25 -0.1 -0.31 -0.26
-0.14 -0.17 -0.48 -0.69 -0.89 -0.92 -0.32 -0.72 -0.21 -0.23 -0.04 -0.2 1.44 1.41 0.54 1.65 -1.44 -0.43 0.48 -2.97 -0.29 -3.35 0.78 0.97 -1.48 -1.05 -1.03 -1.11 -0.61 -0.38 0.09 0.42
-0.32 -0.97 -0.79 -0.66 -0.51 -0.52 -1.08 -0.22 -0.59 -0.48 -0.53 -0.84 2.31 1.16 -5.4 2.49 -0.77 -2.56 0.23 -4.94 -1.54 -5.37 -0.5 0.0 -0.74 0.86 0.22 0.21 -0.32 -0.23 -1.12 -1.23
-1.28 -0.86 -0.81 -0.55 -0.31 -0.54 -0.35 -0.42 -1.09 -1.13 -1.41 -1.55 2.79 1.56 -1.23 1.81 -0.79 -1.16 1.01 -1.04 -1.0 -1.29 -1.46 -0.42 0.78 -0.3 -0.18 -0.08 -1.77 -1.39 -1.57 -1.42
-0.41 -0.84 -1.35 -1.44 -0.99 -1.2 -1.01 -0.39 -0.17 -0.31 -0.12 -0.14 1.12 1.09 0.1 1.71 -1.85 -1.06 0.25 -0.63 -0.28 -3.75 -0.05 0.77 0.81 0.6 -0.69 -1.04 -0.79 -0.42 0.86 0.91
-0.29 -0.16 -0.23 -0.21 -0.1 -0.24 -0.2 -0.18 -0.17 -0.19 -0.24 -0.26 0.74 0.28 0.05 0.9 -0.26 0.18 0.47 -2.72 -0.63 -2.89 0.31 0.62 -0.51 0.6 0.08 0.02 0.05 0.09 0.27 0.19
-0.36 -0.36 -0.26 -0.29 -0.34 -0.34 -0.35 -0.41 -0.43 -0.37 -0.43 -0.55 0.87 1.21 0.64 0.97 -0.33 -0.4 0.25 -1.87 -0.17 -0.36 0.23 0.32 0.48 -0.05 0.01 -0.01 -0.29 -0.3 0.07 -0.08
-2.06 -2.59 -3.34 -2.45 -2.16 -2.56 -3.07 -1.86 -2.36 -1.62 -1.82 -2.35 2.72 1.38 -4.85 2.93 -4.22 -0.03 1.78 -3.69 -2.37 -2.57 -2.29 0.69 -1.46 1.78 -0.66 -1.19 -2.35 -2.01 -1.79 -1.74
-0.58 -1.33 -0.95 -0.69 -0.47 -1.11 -0.87 0.12 -0.03 0.13 0.28 -0.37 2.21 1.36 -0.69 1.45 -2.32 -3.29 -1.81 -3.18 -0.61 - -1.42 -0.84 1.82 1.45 0.3 0.18 -1.32 -1.1 -1.55 -1.88
-0.97 -1.2 -1.25 -1.08 -0.58 -0.77 -0.32 -0.26 -0.16 -0.34 -0.2 -0.86 1.98 0.64 0.22 1.7 -1.9 -1.14 0.8 -1.63 -1.25 -3.1 0.26 1.19 -1.44 0.79 -0.77 -0.97 -0.71 -0.38 0.58 0.46
-1.65 -1.67 -2.29 -1.89 -3.85 -3.09 -2.94 -3.02 -3.2 -2.11 -2.62 -2.72 2.73 1.2 -0.72 2.96 -1.48 -1.32 2.38 -2.73 -0.14 -3.82 -0.7 0.26 -1.73 -2.71 -1.44 -2.14 -1.13 -0.18 -0.82 -0.72
-0.75 -0.6 - -2.33 - - - - - -1.22 - -2.63 3.03 2.09 -3.12 2.84 -2.24 - 1.56 - - - -0.12 -0.32 - - -1.05 1.15 -0.77 0.23 -0.81 -1.45
-0.32 0.06 0.18 0.41 0.2 0.11 0.07 -0.4 -0.07 -0.15 -0.19 -0.28 1.67 0.31 -4.09 1.63 0.33 -0.96 -0.14 -2.27 -1.04 -5.92 -1.28 -0.94 0.18 0.48 0.23 0.48 0.09 0.21 -1.03 -1.35
-1.72 -1.97 -0.37 -0.82 -1.09 -1.89 -1.79 -1.67 -2.67 -2.65 -0.75 -1.97 1.23 2.15 0.76 2.6 -1.12 -1.43 -0.91 - - - 1.61 1.57 -4.99 -2.25 -0.83 -2.09 0.46 1.02 -0.72 -0.67
-0.93 -0.83 -0.89 -0.82 -0.31 -0.55 -0.75 -0.85 -0.92 -1.01 -1.15 -1.4 2.14 1.68 0.65 2.17 -0.88 -0.74 1.1 -0.53 -1.24 -1.32 -0.68 -0.05 -0.24 -0.33 -0.12 -0.32 -1.2 -1.0 -1.19 -0.98
-0.23 -0.05 0.03 0.33 0.53 0.62 0.2 -0.1 -0.31 -0.42 -0.66 -0.96 1.39 -0.09 -1.69 0.94 0.76 0.25 0.67 -3.19 -0.04 -3.24 -0.67 -1.19 -1.0 0.44 0.25 0.49 0.01 0.1 -0.89 -0.82
0.2 -0.05 -0.17 0.05 -0.17 -0.36 -0.58 -0.08 -0.36 -0.02 0.17 0.28 1.04 1.02 -0.53 1.08 -0.63 -0.34 0.22 -2.3 0.6 - -0.25 0.4 0.48 -0.1 -0.35 0.07 -0.48 0.23 -0.71 -0.93
-2.58 -1.61 -2.33 -2.03 -1.3 -0.73 -1.42 -2.59 -1.17 -0.92 -3.57 -2.48 1.91 1.23 -0.75 2.41 -0.98 1.07 0.35 -2.92 -3.78 0.07 0.81 1.08 1.19 -0.14 -0.11 -1.3 -0.86 -0.07 -0.68 -0.74
-1.27 -1.44 -1.29 -0.84 -0.41 -1.51 -1.49 -1.29 -0.62 -1.41 -1.28 -1.12 2.47 1.34 1.69 2.56 -3.12 -2.12 1.59 -0.25 -2.18 -1.61 -3.21 -1.89 -0.45 0.27 0.08 -1.2 -2.36 -1.49 -3.35 -3.37
-0.95 -0.92 -0.86 -0.89 -0.71 -0.51 -0.72 -0.78 -0.7 -0.72 -0.68 -1.11 1.08 2.03 0.46 1.92 -0.5 0.67 0.23 -2.9 -0.51 -3.0 0.85 1.1 -3.19 -0.59 -0.81 -0.7 -0.08 0.02 -0.45 -0.6
-0.86 -0.76 -0.65 -0.78 -0.67 -0.54 -1.34 -0.83 -0.68 -0.59 -0.64 -0.95 2.0 1.05 -0.71 2.18 -1.18 -2.05 0.61 -4.49 -2.73 - 0.23 0.96 1.02 1.06 -0.3 -0.12 -0.5 -0.15 -1.03 -1.98
-1.36 - - - - - - - - - - - 0.32 3.26 1.04 3.62 - - 1.17 - - - - - - - 1.58 - - 0.18 - -
0.13 0.21 -0.26 -0.37 -0.44 -0.48 0.58 0.09 0.29 -0.11 -0.13 -0.42 0.76 1.39 0.11 0.99 -1.25 -1.38 0.66 -1.65 -0.87 -4.09 -0.31 0.2 -0.81 -0.46 -0.85 -1.0 0.24 0.79 0.47 0.08
-1.02 -0.83 -0.79 -0.86 -0.65 -0.6 -0.68 -0.49 -0.61 -0.74 -0.8 -0.92 1.12 1.88 0.66 1.57 -1.08 -0.68 0.47 -2.23 -0.2 -1.16 0.36 0.79 0.16 0.1 0.12 -0.51 -0.37 -0.33 -0.11 -0.14
-1.26 -1.11 -0.35 -0.37 -1.05 -1.18 -1.68 -0.28 -1.64 -0.34 -1.24 -1.29 2.85 2.01 0.99 2.62 -2.02 -1.5 1.07 -6.51 - - -1.72 -0.92 - -0.76 -0.53 -2.15 -1.53 -1.3 -2.46 -2.31
-2.42 -1.71 -1.32 -0.7 -0.33 -0.82 -0.58 -1.12 -1.57 -1.33 -1.79 -2.2 2.5 1.21 -0.55 1.73 -0.34 0.41 1.52 -1.93 -2.78 -1.79 -0.33 0.79 -0.48 -0.81 0.59 -0.13 -0.81 -0.64 -0.6 -0.0
-0.24 -0.19 -0.58 -0.52 -0.67 -0.67 0.28 -0.11 0.07 -0.29 -0.24 -0.31 0.92 1.62 0.8 0.78 -1.22 -1.33 0.52 -2.47 -1.05 -2.58 -0.02 0.62 -0.95 -0.11 -0.49 -0.62 0.28 0.87 0.11 -0.0
0.37 -0.18 -0.02 -0.58 -0.57 -0.25 -0.52 0.05 0.17 0.02 0.14 -0.03 1.08 0.41 -1.83 0.65 -0.98 -0.32 0.61 -8.72 -0.78 -6.36 0.12 0.27 -0.18 0.45 0.37 -0.08 -0.48 -0.54 0.81 1.02
-1.24 -1.25 -0.55 -0.95 0.13 -0.88 -0.54 -0.28 -0.72 -0.73 -0.62 -1.14 2.23 1.64 -0.3 1.83 -2.0 -1.37 -1.06 -2.43 -2.0 -3.37 -0.6 0.88 -1.1 -0.11 1.65 -0.03 -1.38 -0.07 -1.27 -0.18
- - - - - - - -2.79 - - -0.68 - 2.93 1.54 0.48 2.97 -4.21 -3.4 -0.1 -4.53 - - -0.37 0.72 - 2.26 -1.27 -0.45 -0.51 -1.08 -1.49 -1.21
0.06 -0.19 -0.19 -0.17 -0.39 -0.24 -0.2 -0.25 -0.28 -0.11 -0.0 -0.24 0.74 0.75 -0.18 1.06 -0.61 0.09 0.59 -1.29 -0.9 -2.3 0.36 0.58 -1.05 0.12 -0.02 0.13 -0.06 0.19 0.05 0.2
-0.05 0.15 0.05 0.43 0.55 0.34 0.11 0.09 -0.01 -0.28 -0.01 -0.3 1.98 -0.43 -2.16 2.05 0.43 -0.81 -0.17 - - - -0.86 -1.58 -4.91 -1.16 0.24 0.39 -0.06 -0.12 -0.38 -0.58
-0.22 -1.14 -0.64 -0.32 -0.2 -0.89 -0.64 0.26 0.3 0.62 0.47 -0.04 2.4 1.07 -1.07 1.46 -2.12 -4.16 -1.66 -8.72 -1.38 -8.22 -1.22 -0.74 0.73 1.5 -0.16 -0.18 -0.79 -0.95 -0.88 -1.51
-1.85 -2.12 -2.45 -2.17 -1.73 -1.71 -1.35 -0.88 -0.71 -0.81 -1.16 -1.23 1.18 1.39 -0.03 2.22 -2.39 -0.2 0.45 0.7 1.03 -2.55 -1.59 -0.42 -1.22 0.87 0.59 -1.4 -0.44 -0.52 0.87 1.15
-0.7 -0.56 -0.82 -0.48 -0.26 -0.64 -0.58 0.23 0.12 -0.01 0.01 -0.22 1.75 1.12 -0.07 1.5 -1.44 0.13 0.77 - -4.2 - -0.17 0.43 -1.2 0.64 -0.03 -0.3 -0.32 -0.26 -0.13 0.07
-0.37 -0.42 -0.37 -0.12 0.16 -0.11 -0.11 0.03 -0.24 -0.36 -0.24 -0.72 1.69 0.6 -0.32 1.17 -1.17 -0.74 0.4 -4.27 -4.42 -5.0 0.69 1.15 -1.2 0.78 0.49 0.03 -0.78 -0.52 -0.26 -0.12
0.29 0.02 0.1 -0.26 -0.02 -0.08 -0.53 -0.25 -0.25 -0.35 -0.41 -0.39 1.15 0.72 -0.95 0.92 -1.05 -0.06 0.5 -1.2 -2.15 -3.43 0.71 0.85 0.23 -0.06 0.24 0.31 -0.48 -0.19 -0.18 -0.19
-0.17 -0.77 -1.34 -0.76 -0.29 -0.26 -1.14 -0.86 -1.03 -1.47 -0.82 -1.37 2.51 0.49 -1.15 2.54 -1.34 0.12 1.56 -1.82 -4.63 0.7 -0.82 -0.37 -3.9 -1.9 -1.49 -1.92 -1.13 -0.13 -0.2 -0.37
0.1 0.33 0.21 0.0 -0.1 -0.29 -0.2 -0.34 -0.14 0.02 0.06 0.16 1.15 -0.18 0.29 1.98 -1.53 -1.12 0.81 -1.06 -1.83 -2.17 -1.04 -0.02 -1.09 0.09 0.36 -0.16 -0.72 -0.6 -0.56 0.11
-0.13 -0.42 -0.39 -0.59 -0.41 -0.09 -0.3 -0.31 -0.09 -0.11 0.25 -0.29 1.49 2.16 -1.74 1.46 -0.43 -0.01 0.45 -5.94 1.39 -6.27 -0.95 -1.32 -3.63 -1.21 -0.83 -1.0 -0.05 -0.45 -0.39 -0.5
0.1 -0.18 -0.13 -0.08 -0.05 0.16 0.07 0.01 0.26 0.41 0.23 0.17 1.09 0.7 -0.75 1.07 -0.92 -0.49 0.16 -1.77 -1.4 -1.77 0.3 0.55 -1.82 -0.25 -0.59 -0.58 0.04 0.09 0.08 0.23
0.01 -0.03 0.01 0.01 -0.28 -0.02 -0.28 -0.18 -0.25 -0.09 -0.19 -0.14 1.28 1.34 0.36 1.22 -0.49 -0.32 0.36 -1.49 -0.15 -3.19 0.03 0.28 0.53 -1.09 -1.09 -0.99 -0.35 -0.34 -0.47 -0.41
-0.28 -0.07 -0.18 -0.22 -0.32 -0.31 -0.17 -0.22 -0.08 0.18 -0.06 0.01 1.85 1.18 -2.64 1.74 -0.8 -1.1 -0.55 -1.91 -1.93 -5.6 0.13 0.17 0.87 0.72 -0.32 0.01 -0.61 -0.46 -1.87 -1.76
-1.06 -0.35 -0.16 -0.14 -0.29 -0.46 -0.52 -0.32 -0.17 -0.23 -0.32 -0.42 1.38 0.31 0.22 1.21 -0.17 -0.46 0.84 - -4.29 -6.17 0.64 0.83 -1.31 0.85 -0.15 -0.09 0.05 -0.07 0.15 0.39

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.