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Heatmap: Cluster_86 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
0.0 0.0 0.07 0.0 0.79 0.06 0.0 0.0 0.0 0.04 0.0 0.05 0.15 0.39 0.4 0.25 0.03 0.43 0.14 0.0 0.0 0.0 0.18 0.09 0.21 1.28 0.97 0.9 0.03 0.05 0.03 0.1
5.09 7.2 4.64 5.92 8.17 7.06 6.34 6.68 7.61 6.94 5.63 6.5 15.77 11.54 15.18 11.95 2.83 7.85 10.24 0.06 3.81 0.23 6.24 8.17 14.75 19.3 20.29 18.21 4.73 5.09 2.88 3.47
1.04 1.01 1.09 1.25 1.49 1.52 1.08 1.83 1.53 1.66 1.66 1.22 3.31 2.27 0.46 4.19 0.01 0.04 0.13 0.0 0.0 0.0 0.08 0.45 0.19 2.63 3.08 2.87 0.06 0.16 0.11 0.1
0.43 0.0 0.83 0.0 0.0 4.79 0.66 0.0 0.0 0.0 0.43 0.0 0.68 0.0 3.51 0.6 0.28 4.27 0.47 1.36 1.08 0.52 0.49 0.27 8.12 27.4 28.56 33.58 0.46 0.12 1.15 0.51
3.19 5.89 7.75 9.96 27.67 7.88 9.59 7.94 3.84 3.62 3.33 2.87 44.13 14.31 47.84 19.02 4.59 9.59 43.05 1.83 14.55 0.36 9.43 19.4 42.42 25.77 29.54 37.71 4.99 6.08 1.85 3.0
7.99 6.47 6.12 8.1 8.49 8.96 9.35 11.5 10.12 9.9 8.87 7.2 12.29 15.1 11.22 14.61 7.34 6.56 10.33 4.58 10.72 3.02 6.89 7.32 12.14 14.34 9.04 8.74 8.88 8.22 5.17 3.95
0.1 0.74 0.25 0.45 0.24 0.53 0.09 0.0 0.03 0.09 0.06 0.0 0.09 0.25 0.0 0.08 0.22 0.22 0.31 0.0 0.0 0.0 0.26 0.28 0.73 0.36 1.53 3.0 0.1 0.04 0.0 0.03
0.01 0.04 0.04 0.02 0.0 0.02 0.0 0.0 0.0 0.0 0.0 0.02 0.02 0.0 0.0 0.0 0.0 0.06 0.23 0.0 0.0 0.0 0.0 0.0 0.13 0.19 0.14 0.0 0.0 0.0 0.0 0.0
2.18 2.82 1.83 2.6 2.92 3.04 2.56 2.64 3.19 3.24 3.17 2.37 1.26 0.76 0.25 1.47 1.04 5.81 2.34 0.0 0.48 0.31 1.89 1.96 1.66 1.74 2.15 1.47 0.9 1.22 1.07 1.42
17.36 20.1 27.49 25.53 28.98 25.11 28.08 27.39 28.65 28.7 29.43 23.14 17.3 24.87 31.69 27.33 16.53 31.48 45.71 24.84 43.38 26.71 19.0 17.82 51.05 110.01 64.15 42.44 22.01 24.16 17.37 27.8
0.47 0.11 0.33 0.17 0.19 0.24 0.17 0.24 0.14 0.38 0.15 0.27 1.02 0.3 0.09 0.6 0.15 0.28 0.49 0.0 0.0 0.0 0.21 0.29 0.09 0.72 0.67 0.67 0.2 0.08 0.15 0.25
3.25 2.58 1.31 2.15 2.04 2.45 2.35 3.18 1.99 2.2 2.52 1.82 0.29 6.67 1.54 2.21 0.69 8.93 1.06 0.28 1.28 0.54 0.63 0.81 2.22 5.34 5.29 5.62 0.91 0.68 0.32 0.24
3.71 3.08 3.09 3.03 2.84 3.44 3.98 4.63 4.05 2.64 2.9 2.7 0.37 2.07 2.73 1.2 1.74 6.07 6.83 0.09 1.1 0.0 1.87 1.71 5.13 7.74 9.01 10.55 2.16 2.01 2.83 1.96
3.84 3.56 3.31 3.73 3.66 4.03 3.74 5.25 5.24 4.66 4.53 4.22 0.73 1.58 1.53 0.86 1.66 11.02 1.47 0.15 2.46 0.36 1.1 0.93 2.48 6.67 7.28 7.07 1.49 1.61 1.8 1.29
5.15 3.84 2.65 3.6 4.23 3.43 4.63 6.03 6.37 7.2 5.51 6.04 0.75 2.7 3.61 0.85 0.72 7.72 1.15 1.44 2.39 0.71 0.7 0.82 3.63 6.16 5.03 5.79 0.83 1.08 1.6 1.59
0.57 0.25 0.35 0.35 0.05 0.31 0.32 0.81 0.57 0.46 0.54 0.82 0.25 0.53 0.37 0.49 0.39 2.58 1.61 0.18 0.77 0.44 0.6 0.58 2.29 2.86 1.83 3.41 0.46 0.46 0.55 0.33
7.27 9.33 11.3 10.37 10.06 9.81 12.23 11.67 12.78 12.09 12.54 11.87 12.85 11.03 3.12 25.81 3.98 6.41 10.81 2.87 3.89 2.09 4.0 6.51 6.48 21.1 30.98 23.64 7.41 9.55 5.37 8.11
0.63 0.98 1.74 1.58 1.31 1.34 1.41 2.45 1.09 1.79 1.06 0.69 0.02 0.04 0.01 0.02 0.62 3.72 1.04 0.0 0.16 0.0 0.56 0.2 0.84 0.85 1.78 2.54 0.62 0.4 0.13 0.1
0.43 0.6 0.4 0.4 0.43 0.4 0.66 0.49 0.46 0.56 0.36 0.46 0.13 0.68 0.22 0.26 0.33 0.57 0.93 0.0 0.06 0.0 0.42 0.48 1.07 0.83 0.98 1.61 0.32 0.33 0.3 0.2
1.37 1.33 0.84 1.61 1.0 1.59 2.5 1.58 1.98 2.48 1.82 1.86 0.0 0.06 0.05 0.0 1.25 4.49 0.51 0.0 0.59 0.24 1.81 0.93 2.69 0.93 0.94 1.79 1.46 1.47 1.15 1.3
9.59 7.22 5.88 6.08 6.24 6.85 8.74 6.3 4.26 7.69 7.36 6.44 8.96 2.49 0.9 3.45 1.42 43.52 4.98 5.16 6.09 1.2 2.34 2.72 5.08 127.18 51.09 26.77 2.72 3.28 3.34 2.86
0.18 0.07 0.02 0.07 0.23 0.09 0.15 0.11 0.16 0.08 0.05 0.05 0.0 0.02 0.05 0.0 0.06 0.34 0.36 0.11 0.09 0.02 0.02 0.03 0.05 0.34 0.55 1.1 0.09 0.1 0.07 0.01
1.0 1.21 1.09 1.69 1.4 2.0 1.41 1.81 1.34 1.07 1.0 0.6 3.02 2.25 2.12 1.82 1.06 0.68 1.21 0.34 0.09 0.0 0.97 0.8 0.57 1.3 3.03 3.21 0.62 0.86 0.65 0.48
4.03 4.07 3.39 3.03 2.98 3.63 2.66 3.54 3.64 3.94 3.2 3.1 0.26 2.55 1.18 0.36 1.52 4.92 6.31 4.5 1.83 0.5 2.18 1.37 4.01 8.35 8.3 9.16 1.73 1.75 1.2 0.98
1.04 0.71 0.97 1.36 1.39 1.06 1.43 1.15 0.64 0.97 0.92 1.24 0.36 1.08 0.2 0.88 0.7 1.99 2.46 0.0 0.09 0.21 0.72 0.94 1.41 2.41 3.21 3.08 0.84 0.87 0.8 0.79
0.51 0.5 0.09 0.33 0.5 0.23 0.21 0.18 0.26 0.14 0.17 0.49 0.93 0.13 0.28 0.47 0.11 0.41 0.9 0.02 0.0 0.0 0.12 0.11 0.07 0.86 0.64 1.25 0.27 0.27 0.16 0.16
0.41 0.17 0.37 0.32 0.03 0.18 0.16 0.25 0.12 0.17 0.23 0.27 0.33 0.24 0.16 0.1 0.01 0.04 0.37 0.0 0.0 0.0 0.02 0.16 0.13 1.14 0.7 0.69 0.03 0.07 0.04 0.0
0.11 0.37 0.0 0.17 0.2 0.11 0.0 0.05 0.11 0.0 0.07 0.06 0.19 0.06 0.14 0.39 0.04 1.15 0.09 0.0 0.2 0.0 0.08 0.12 0.79 0.52 0.74 0.61 0.08 0.17 0.08 0.0
6.22 6.21 7.42 7.21 5.86 6.61 6.23 6.75 6.78 8.22 7.23 6.42 7.09 6.41 5.09 6.18 4.7 12.84 6.48 0.94 6.34 0.0 6.21 7.1 14.09 15.58 13.35 13.35 4.1 4.65 3.5 3.54
31.26 25.26 18.01 27.09 23.02 23.85 25.85 33.13 28.16 30.96 29.64 38.69 2.6 3.73 1.9 3.06 9.46 83.41 8.56 6.41 17.5 0.62 5.61 3.86 8.71 88.75 44.49 47.07 8.61 7.38 11.51 7.34
0.45 0.43 0.53 0.46 0.25 0.44 0.49 0.55 0.55 1.11 0.77 0.75 0.32 1.45 0.59 0.21 0.06 2.17 0.23 0.0 0.0 0.0 0.09 0.17 0.36 0.85 1.07 0.13 0.11 0.15 0.06 0.05
0.99 0.96 0.57 0.78 0.75 0.68 0.98 1.19 0.93 1.06 0.99 0.72 1.43 2.72 3.2 2.26 0.22 5.17 1.02 0.1 4.81 3.8 0.59 0.95 5.2 7.19 5.54 4.73 0.26 0.52 0.2 0.49
3.25 3.67 3.41 3.12 5.48 3.64 2.5 3.12 3.7 4.75 4.8 3.52 11.36 6.12 10.66 9.15 1.35 6.46 5.36 0.85 1.55 2.36 3.74 7.07 10.89 8.42 5.1 7.54 1.77 1.98 1.69 1.79
0.01 0.04 0.07 0.0 0.0 0.0 0.0 0.02 0.0 0.04 0.0 0.0 0.02 0.0 0.0 0.0 0.0 0.0 0.05 0.0 0.0 0.0 0.0 0.02 0.09 0.14 0.12 0.21 0.02 0.0 0.0 0.0
0.19 0.15 0.09 0.37 0.13 0.2 0.14 0.22 0.25 0.21 0.4 0.13 0.45 0.24 0.24 0.15 0.0 2.44 0.66 0.23 0.39 0.0 0.06 0.11 2.45 0.89 0.56 0.68 0.02 0.07 0.03 0.0
0.03 0.0 0.0 0.0 0.03 0.29 0.78 0.88 0.6 0.35 0.33 0.28 0.0 0.0 0.03 0.0 0.08 1.81 0.02 0.0 0.0 0.0 0.0 0.0 0.12 0.15 1.02 0.91 0.03 0.08 0.03 0.02
0.05 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02 0.0 0.07 0.03 0.0 0.03 0.0 0.0 0.3 0.0 0.0 0.0 0.0 0.0 0.0 0.23 0.0 0.0 0.0 0.0 0.0 0.03 0.0
0.31 0.49 0.16 0.34 0.44 1.33 0.73 0.46 0.34 0.93 0.7 0.6 1.25 0.68 0.52 0.52 0.08 1.14 0.28 0.0 0.1 1.53 0.12 0.19 0.0 2.4 2.55 2.71 0.21 0.35 0.43 0.37
0.24 0.16 0.34 0.18 1.28 0.9 0.59 0.86 0.92 0.6 0.07 0.13 0.34 1.96 0.25 0.32 0.19 0.56 0.24 0.0 0.22 0.0 0.31 0.25 0.19 0.56 1.13 1.46 0.49 0.62 0.42 0.43
23.04 29.0 33.21 35.34 38.23 37.02 40.91 39.92 37.7 35.19 31.61 27.5 70.06 49.02 28.67 66.88 26.96 22.25 40.62 33.19 24.23 25.46 34.03 35.11 23.87 43.71 43.53 52.1 23.78 25.09 17.51 16.64
21.14 25.3 24.07 22.29 17.94 19.48 8.07 13.98 18.95 22.28 24.52 18.7 2.98 11.09 17.56 1.47 3.69 18.41 4.15 48.28 0.0 5.73 0.87 6.39 3.58 226.69 9.85 4.06 4.53 5.78 5.1 1.69
15.64 14.68 12.41 14.8 14.05 15.41 13.34 16.55 18.03 17.83 15.52 18.1 4.17 1.39 0.43 4.23 7.4 23.81 5.96 0.18 2.5 0.61 8.39 7.99 7.69 17.49 16.57 13.34 8.84 7.93 14.05 12.8
20.14 28.51 31.32 30.08 32.95 33.81 48.33 32.91 42.47 36.7 31.79 31.32 51.1 27.48 9.28 75.01 17.33 18.1 60.64 4.52 5.65 0.44 7.53 12.86 21.23 45.02 38.71 32.91 29.87 44.42 35.59 47.13
9.82 5.9 6.95 6.14 4.07 4.84 5.73 5.75 6.81 8.14 8.44 9.24 0.59 1.4 0.63 1.05 3.81 17.89 2.83 1.03 8.53 0.25 3.54 2.38 16.72 8.1 6.47 6.24 3.3 4.1 3.62 4.97
7.6 5.93 4.39 6.47 5.49 6.36 6.74 7.77 6.77 7.52 7.32 9.11 1.07 1.07 0.65 1.17 3.53 9.78 2.58 0.88 8.99 1.49 2.38 1.71 8.47 17.75 9.13 8.76 2.97 3.32 3.73 2.31
18.05 17.74 16.17 17.35 15.5 18.77 20.38 21.73 20.53 21.02 18.52 19.5 9.16 9.19 10.73 10.04 8.67 15.76 13.83 10.05 18.13 16.94 10.2 10.44 30.2 22.92 23.27 23.37 7.75 9.76 6.01 6.81
3.68 2.7 1.55 2.55 3.63 4.26 3.54 5.8 5.72 3.32 2.39 2.65 2.84 2.19 3.58 2.99 2.29 4.58 5.67 0.82 0.19 3.05 3.05 3.48 6.23 5.53 6.34 5.63 3.14 3.55 2.72 2.71
1.13 1.74 1.06 1.78 4.54 1.71 2.63 1.07 1.0 1.5 1.28 1.85 2.92 2.78 2.33 3.07 1.42 1.53 0.77 0.45 1.04 2.28 1.22 0.77 1.63 7.1 8.34 2.55 0.73 0.97 0.81 0.81

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)